prot_Ecto-sp13_S_contig18304.5682.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18304.5682.1
Unique Nameprot_Ecto-sp13_S_contig18304.5682.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length288
Homology
BLAST of mRNA_Ecto-sp13_S_contig18304.5682.1 vs. uniprot
Match: D7FSD7_ECTSI (Nicastrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD7_ECTSI)

HSP 1 Score: 459 bits (1182), Expect = 1.960e-153
Identity = 250/319 (78.37%), Postives = 254/319 (79.62%), Query Frame = 0
Query:    1 MLAAISWCWTASASPRRRKPMAAAGGPTAGENPSPALALLLACIALLSTRSEARTGGLSPGVGQAPCVRLFHASGDVGCRTRGREGVAGPLLLVDSERALQDIEARGLSSFRKDAQREE-GLLPQEASPEAMEGMGDGLMAVLPDAFFNRAILHRLSATGLLGGVLVLESAGGGRAAAS------QGDVVRRNPDVKTPQ------------------------GNSTPSAAFDVDASYPWNSRGDGLLMESFDFPMVLVAGGSSDDVRARAVSNGNVGGASWRYPLHKARMAFYFGGSAMDLNSQECLGWTDINGDRS 288
            MLAA+SWCWTASA PRR                       LACIALLSTRSEA TGG SPG+G APCVRLFHASGDVGCRTRGREGVAGPL LVDSERALQDIEARGLSSFRKDAQREE GLLPQE S EAMEGMGDGLMAVLPDAFFNR ILHRLSATGLLGGVLVLESAGGGRAAAS      QG+VVR NPDVKTPQ                        G+STPSAAFDVDASYPWNS GDGLLMESFDFPMVLVAGGSSDDVRARAVSNGNVGG SWRYPLHKARMAFYFGGSAMDLNSQECLGWTDINGDRS
Sbjct:    1 MLAAVSWCWTASAGPRRXXXXXXXXXXXXXXXXXXXXXXXLACIALLSTRSEAWTGGFSPGLGHAPCVRLFHASGDVGCRTRGREGVAGPLFLVDSERALQDIEARGLSSFRKDAQREEEGLLPQEGSAEAMEGMGDGLMAVLPDAFFNRTILHRLSATGLLGGVLVLESAGGGRAAASPAHSLAQGNVVRSNPDVKTPQLTCSAFKELSCKAGRLSFFERTEEGDSTPSAAFDVDASYPWNSGGDGLLMESFDFPMVLVAGGSSDDVRARAVSNGNVGGPSWRYPLHKARMAFYFGGSAMDLNSQECLGWTDINGDRS 319          
BLAST of mRNA_Ecto-sp13_S_contig18304.5682.1 vs. uniprot
Match: A0A4D9CV36_9STRA (Nicastrin n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CV36_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.570e-29
Identity = 97/243 (39.92%), Postives = 119/243 (48.97%), Query Frame = 0
Query:   57 GLSPGVGQAPCVRLFHASGDVGCRTRGREGVAGPLLLVDSERALQDIEARGLSSFRKDAQREEGLLPQEASPEAMEGMGDGLMAVLPDAFFNRAILHRLSATG--LLGGVLVLESAGGGRAAASQGDVVRRNPDVKTPQGNSTPSAAFDVDASYPWNSRGDGLLMESFDFPMVL--VAGGSSD----DVRARAVSNGNVGGASWRYPLHKARMAFYFGGSAM------DLNSQECLGWTDING 285
            GL   V QAPCVRLF + G VGCRTR REG   PL                LS F +D Q E               + +G+  V+P +  N  +L  L A       GV+VLE +    AA  + D V  +PDV TPQG+STPSAAF V   + WN RG GLL +  DFP+VL  V G SS      V+  A  NG +G      P +KA+  FYFG  A       DL S +CL W D+ G
Sbjct:   36 GLLKEVTQAPCVRLFSSQGTVGCRTRSREGATAPLYY--------------LSGFGEDDQHE------------YVNLEEGVAVVMPASMLNSTVLEFLKAQSPARTRGVIVLEESKD-MAADFERDSV--SPDVSTPQGDSTPSAAFTVGPDHAWNPRGSGLLNQKHDFPVVLASVDGDSSGVGAAQVKTWAQHNGGLGAGP--LPRYKAKFDFYFGPDAPSTRAEPDLTSADCLSWRDVAG 247          
BLAST of mRNA_Ecto-sp13_S_contig18304.5682.1 vs. uniprot
Match: A0A835YYT6_9STRA (Nicastrin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT6_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 3.970e-16
Identity = 72/220 (32.73%), Postives = 99/220 (45.00%), Query Frame = 0
Query:   70 LFHASGDVGCRTRGREGVAGPLLLVDSERALQDIEARGLSSFRKDAQREEGLLPQEASPEAMEGMG-DGLMAVLPDAFFNRAILHRLSATGLLGGVLVLESAGGGRAAASQGDVVRRNPDVKTPQGNSTPSAAFDV-DASYPWNSRGDGLLMESFDFPMVLVAGGSSDDVRARAVSNGNVGGASWRYPLHKARMAFYFGGSAMDLNSQECLGWTDINGDR 287
            +FH+ GD+GCR   R   A PLL V S+  L+        SF  DA                 G G + + A +P   F  A++ +L  TG+LGG+LV+++     A AS                    +AAF   D    WN+ G  LL  S DFP+VL++G          VSN   G  S  +P + A   FYFG  A  ++S+ECL W D +G R
Sbjct:    1 MFHSGGDIGCRLPERGKQAFPLLSVASQLELE--------SFAADA----------------AGFGKEKVAAAVPATMFTAAVVSQLEGTGVLGGLLVVDTPPPDTAKAS--------------------AAAFSPEDRREGWNAHGSALLRRSLDFPVVLLSGEGGQGALEAGVSNRAHGLGS--FPRYMAEFEFYFG--AASISSKECLQWVDKDGAR 172          
BLAST of mRNA_Ecto-sp13_S_contig18304.5682.1 vs. uniprot
Match: A0A662XXH7_9STRA (PEROXIDASE_4 domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXH7_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 8.580e-9
Identity = 78/260 (30.00%), Postives = 122/260 (46.92%), Query Frame = 0
Query:   39 LLLACIALLS--TRSEARTGGLSPGVGQA--PCVRLFHASGDVGCRTRGREGVAGPLLLVDSERA-LQDIEARG-LSSFRKDAQREEGLLPQEASPEAMEGMGDGLMAVLPDAFFNRAILHRLSATGLLGGVLVLESAGGGRAAASQGDVVRRNPDVKTPQGNSTPSAAFD--VDASYPWNSRGDGLLMESFDFPMVLVAGGSS-DDVRARAVSNGNVG-GASWRYPLHKARMAFYFGGSAMDLNSQECLGWTDINGDRS 288
            L+ A +ALLS   R+ A T G    +      CVRLFH++GDVGCR+           L DS+ A L  I +   L+SF          +  EA  +  +      + V+ +   + A +   +    +GG+ +   A          D    + D  TPQG+ T   A +    A   WN  G+GLL +S  FP+V++   ++ ++   RA  N   G GA++     KA M +YFG +  ++NS +CL +T+I G+RS
Sbjct:  375 LVPAALALLSRDVRASAVTAGAPEHLVTTGGECVRLFHSTGDVGCRS-----------LTDSDMASLYPISSSDELASF----------VAGEADQQDADSK---YVLVMAEPLLSYAAIS--AGLDRIGGLFLFPEA----------DKKNVSFDSATPQGDGTVDGALNPFASAKTEWNPTGNGLLAKSLPFPVVMLENATTGEEFTKRAQMNVKAGVGATY-----KAFMNYYFGPT--EMNSLDCLAFTNIYGNRS 591          
BLAST of mRNA_Ecto-sp13_S_contig18304.5682.1 vs. uniprot
Match: A0A662YIE6_9STRA (Nicastrin n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YIE6_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.850e-8
Identity = 67/228 (29.39%), Postives = 104/228 (45.61%), Query Frame = 0
Query:   67 CVRLFHASGDVGCRTRGREGVAGPLLLVDSERA-LQDIEARG-LSSFRKDAQREEGLLPQEASPEAMEGMGDGLMAVLPDAFFNRAILHRLSATGLLGGVLVLESAGGGRAAASQGDVVRRNPDVKTPQGNSTPSAAFD--VDASYPWNSRGDGLLMESFDFPMVLVAGGSS-DDVRARAVSNGNVG-GASWRYPLHKARMAFYFGGSAMDLNSQECLGWTDINGDRS 288
            CVRLFH++GDVGCR+           L DS+ A L  I +   L+SF              A     +      + V+ +   + A +   +    +GG+ +   A          D    + D  TPQG+ T   A +    A   WN  G+GLL +S  FP+V++   ++ ++   RA  N   G GA++     KA M +YFG +  ++NS +CL +T+I G RS
Sbjct:   41 CVRLFHSTGDVGCRS-----------LTDSDMASLYPISSSDELASF-------------VAGKADQQDADSKYVLVMAEPLLSYAAIS--AGLDRIGGLFLFPEA----------DKKNVSFDSVTPQGDGTVDGALNPFTSAKTEWNPTGNGLLAKSLPFPVVMLENATTGEEFTKRAQMNVKAGVGATY-----KAFMNYYFGPT--EMNSLDCLAFTNIYGSRS 225          
BLAST of mRNA_Ecto-sp13_S_contig18304.5682.1 vs. uniprot
Match: A0A5D6XV32_9STRA (Nicastrin n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV32_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 9.290e-8
Identity = 67/225 (29.78%), Postives = 92/225 (40.89%), Query Frame = 0
Query:   67 CVRLFHASGDVGCRTRGREGVAGPLLLVDSERALQDIEARGLSSFRKDAQREEGLLPQEASPEAMEGMGDGLMAVLPDAFFNRAILHRLSATGLLGGVLVLESAGGGRAAASQGDVVRRNPDVKTPQGNSTPSAAFD--VDASYPWNSRGDGLLMESFDFPMVLVAGGS-SDDVRARAVSNGNVGGASWRYPLHKARMAFYFGGSAMDLNSQECLGWTDINGDRS 288
            CVRLFH+SG VGCR+     +A PL  + S        A  L+ F   A              A +  G+    VLP+A    A      A   + G+ V        + A+            TPQG  T   A +   D    WN  G GLL     FP+VL+   + +    ARA +N   G  +     +KA M +YFG + MD  S+ CL + +I G  S
Sbjct:   43 CVRLFHSSGAVGCRSLSDADMA-PLFPIAS--------AEELARFASGA-------------AARQDSGEKYALVLPEALLGAAAFE--PALARVAGLFVYPDGANATSFAAA-----------TPQGAGTVDGALNPFADRKVAWNPAGTGLLDRQLPFPVVLLQDAAVAAQFVARAQTNVQAGAGA----TYKAFMKYYFGPAEMD--SRRCLAFQNIYGQDS 226          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18304.5682.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FSD7_ECTSI1.960e-15378.37Nicastrin n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A4D9CV36_9STRA3.570e-2939.92Nicastrin n=3 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
A0A835YYT6_9STRA3.970e-1632.73Nicastrin n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
A0A662XXH7_9STRA8.580e-930.00PEROXIDASE_4 domain-containing protein (Fragment) ... [more]
A0A662YIE6_9STRA3.850e-829.39Nicastrin n=1 Tax=Nothophytophthora sp. Chile5 Tax... [more]
A0A5D6XV32_9STRA9.290e-829.78Nicastrin n=1 Tax=Pythium brassicum TaxID=1485010 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041084Nicastrin, small lobePFAMPF18266Ncstrn_smallcoord: 137..262
e-value: 4.0E-13
score: 49.7
IPR008710NicastrinPANTHERPTHR21092NICASTRINcoord: 61..282
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..288
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 48..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 36..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18304contigEcto-sp13_S_contig18304:3..3511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18304.5682.1mRNA_Ecto-sp13_S_contig18304.5682.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18304 3..3511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18304.5682.1 ID=prot_Ecto-sp13_S_contig18304.5682.1|Name=mRNA_Ecto-sp13_S_contig18304.5682.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=288bp
MLAAISWCWTASASPRRRKPMAAAGGPTAGENPSPALALLLACIALLSTR
SEARTGGLSPGVGQAPCVRLFHASGDVGCRTRGREGVAGPLLLVDSERAL
QDIEARGLSSFRKDAQREEGLLPQEASPEAMEGMGDGLMAVLPDAFFNRA
ILHRLSATGLLGGVLVLESAGGGRAAASQGDVVRRNPDVKTPQGNSTPSA
AFDVDASYPWNSRGDGLLMESFDFPMVLVAGGSSDDVRARAVSNGNVGGA
SWRYPLHKARMAFYFGGSAMDLNSQECLGWTDINGDRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041084Ncstrn_small
IPR008710Nicastrin