prot_Ecto-sp13_S_contig18241.5651.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18241.5651.1
Unique Nameprot_Ecto-sp13_S_contig18241.5651.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length147
Homology
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: D8LCX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCX3_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 7.820e-94
Identity = 140/143 (97.90%), Postives = 142/143 (99.30%), Query Frame = 0
Query:    1 SSKKEKNTETDILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIACEGEVRSLSFTPDGRFIAISMSGGGVEI 143
            SSKKE+NTETDILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEY+INATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIACEGEVRSLSFTPDGRFIAISMSG GVEI
Sbjct:  126 SSKKERNTETDILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYLINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIACEGEVRSLSFTPDGRFIAISMSGVGVEI 268          
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A1Y2GJE1_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GJE1_9FUNG)

HSP 1 Score: 94.7 bits (234), Expect = 1.800e-20
Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 0
Query:   11 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIAISMSGGGVEI 143
            D++   D RT K  K V F +  ++  W+P G+  +  T  GSI V ++ + + +  +     AHTA C  L  DP  RYLA+G  D LV+LW+L+D++CVRT       +R++SF+ DG FIA +     ++I
Sbjct:  137 DLISFIDTRTFKVQKEVPFRVEVNEISWNPAGDLFLLTTGQGSIKVFSYPAMEEVYALE----AHTANCYCLEFDPRGRYLATGSADALVNLWDLEDYICVRTFGQLHWPIRTISFSFDGEFIASASEDFAIDI 266          
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A7S1SU92_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SU92_9CHLO)

HSP 1 Score: 90.9 bits (224), Expect = 1.370e-19
Identity = 45/135 (33.33%), Postives = 80/135 (59.26%), Query Frame = 0
Query:   11 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRT-IACEGEVRSLSFTPDGRFIAISMSGGGVEIV 144
            D++   D+R  K LKS K++   ++  W+ + +  +  T  G+I+V+++ + + +  ++    AHT+ C  +  DP  +YLASGG D LVSLW+++D VC++T I  +  VR+L F+ D   +A +     +EIV
Sbjct:   58 DVISFLDIRKMKLLKSHKYSFEVNEICWNKSCDMFLLTTGNGTIEVLSYPTMENIQTLK----AHTSNCFCIGFDPAEKYLASGGADALVSLWDMEDLVCIQTFIRMDTPVRALDFSHDSTHLAFAAEDSPIEIV 188          
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A1Y1ZAN0_9FUNG (WD40 repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZAN0_9FUNG)

HSP 1 Score: 91.3 bits (225), Expect = 3.300e-19
Identity = 47/124 (37.90%), Postives = 73/124 (58.87%), Query Frame = 0
Query:   11 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTI-ACEGEVRSLSFTPDGRFIA 133
            D++   D +  K  K+ K  +  ++  W  +G+Y    T  G + ++ F + KPL     T  A TA C  L  DP  RYLA+GG D LV+LW+LD+FVCVR+  + +  VR++SF+ DG+++A
Sbjct:  134 DLISFIDTKQFKIEKTSKHDVEVNEIAWDHSGDYFFLTTGQGHVKILEFPTLKPLH----TLDAQTANCYCLEFDPMGRYLAAGGADALVTLWDLDEFVCVRSFDSLDWPVRTISFSYDGQYLA 253          
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A022QYR7_ERYGU (eIF2A domain-containing protein (Fragment) n=3 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QYR7_ERYGU)

HSP 1 Score: 89.0 bits (219), Expect = 1.050e-18
Identity = 48/124 (38.71%), Postives = 70/124 (56.45%), Query Frame = 0
Query:   11 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIA 133
            D L I D+R  K +   KF    ++  W+  G+     T  G+++V+A+    P  R  +T +AHTA C  +AIDP  RY A G  D LVSLW++++ +CVRT    E  VR++SF   G +IA
Sbjct:   76 DELTILDVRKFKPIHKRKFNYEVNEIAWNTTGDKFFLTTGNGTVEVLAY----PSLRAVNTLMAHTAGCYCIAIDPVGRYFAVGSADSLVSLWDVNEMLCVRTFTKLEWPVRTISFNHTGEYIA 195          
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A0C3RZW8_PHLGI (Uncharacterized protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3RZW8_PHLGI)

HSP 1 Score: 86.7 bits (213), Expect = 2.760e-17
Identity = 45/110 (40.91%), Postives = 72/110 (65.45%), Query Frame = 0
Query:   38 WSPNGEYII-NATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIAISMSGGGVEIVS 145
            +S  G+ I+ N     +I VM F S KP+     T  AH A C A+A+DP  RYLASGG+D ++++++L++++C RTI  C+  +  LSF+ DG ++AIS +G  ++IV+
Sbjct:  198 FSNAGDLIVTNNAMDHTIKVMEFPSLKPVH----TSAAHVAGCTAVALDPRGRYLASGGNDSIINMFDLEEWICARTITTCDHAITGLSFSYDGEYLAISNAGNYIDIVA 303          
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A433PX61_9FUNG (WD40-repeat-containing domain protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PX61_9FUNG)

HSP 1 Score: 85.9 bits (211), Expect = 5.520e-17
Identity = 43/113 (38.05%), Postives = 69/113 (61.06%), Query Frame = 0
Query:   34 HDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIAISMSGGGVEIVS 145
            ++  W+ +G+     T  G+I +  + S +PL  ++    AHTA C  L +DP  RYLA+G  D +VSLW+LD++VCVRT    +  VR++SF+ DG ++A +     ++IVS
Sbjct:  188 NEITWNHSGDLFFLTTGQGTIKIFEYPSLRPLHTLQ----AHTANCYCLEVDPRGRYLATGSADAIVSLWDLDEWVCVRTFGKLDWPVRTISFSHDGEYLASASEDLVIDIVS 296          
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A151ZBD7_9MYCE (WD40 repeat-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZBD7_9MYCE)

HSP 1 Score: 85.9 bits (211), Expect = 7.850e-17
Identity = 47/136 (34.56%), Postives = 79/136 (58.09%), Query Frame = 0
Query:   11 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKL--AHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIAISMSGGGVEI 143
            DI+ IYD ++ K +K++KF    +++ W P+GE  I  T +G+I+V  +     ++ ++  K+  AH+A    L   P  +Y A G  D LVS W+L++  C++T +     VRS+SF+ DG+FIA +     V+I
Sbjct:  248 DIINIYDAKSGKVMKNMKFNDEVNEFSWDPSGELFILTTGSGNIEVYRY--QVKINDLKFLKVFNAHSANIYCLDFHPSKKYFAVGSADSLVSFWDLEEMCCIKTFSKLVSPVRSISFSFDGQFIASTSEDNQVDI 381          
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A7S2FPW6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FPW6_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 8.090e-17
Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = 0
Query:    7 NTETDILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTI 114
            +T  D + I D+R + K+K  KF    +++ +SPN  ++I  TE G+++V  F     L  VRS + AHT  C  L IDP  +++A G  D LVSLWE DD +C+R++
Sbjct:   26 DTAKDYISIIDVR-EHKIKKHKFPFEVNEFSFSPNSRHMILTTELGTVEVYKFIVGGNLKHVRSIQ-AHTDNCYTLDIDPTGQFMAVGSKDSLVSLWETDDLICLRSV 131          
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Match: A0A833QGC4_9POAL (THO complex subunit 3 isoform X2 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QGC4_9POAL)

HSP 1 Score: 83.6 bits (205), Expect = 2.360e-16
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 0
Query:   11 DILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATETGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLVSLWELDDFVCVRTIA-CEGEVRSLSFTPDGRFIAISMSGGGVEIVS 145
            D L I D+R  K +   KF+   ++  W+  G+     T  G+I+V  + S K    +R   +AHTA C  +++DP  RY A G  D LVSLW++ + +C+RT+   E  VR++ F   G FIA +     V+I +
Sbjct:  130 DELTILDVRKLKTVHKHKFSYEINEIAWNKAGDRFFITTGNGTIEVFDYPSLK----LRHNLIAHTAGCYCISVDPSGRYFAVGSADSLVSLWDVKEMLCIRTLTKMEWPVRTVGFNHTGEFIASASEDPFVDIAN 261          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18241.5651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCX3_ECTSI7.820e-9497.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1Y2GJE1_9FUNG1.800e-2036.57WD40-repeat-containing domain protein n=1 Tax=Lobo... [more]
A0A7S1SU92_9CHLO1.370e-1933.33Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A1Y1ZAN0_9FUNG3.300e-1937.90WD40 repeat-like protein n=1 Tax=Basidiobolus meri... [more]
A0A022QYR7_ERYGU1.050e-1838.71eIF2A domain-containing protein (Fragment) n=3 Tax... [more]
A0A0C3RZW8_PHLGI2.760e-1740.91Uncharacterized protein n=1 Tax=Phlebiopsis gigant... [more]
A0A433PX61_9FUNG5.520e-1738.05WD40-repeat-containing domain protein n=1 Tax=Endo... [more]
A0A151ZBD7_9MYCE7.850e-1734.56WD40 repeat-containing protein n=1 Tax=Tieghemoste... [more]
A0A7S2FPW6_9STRA8.090e-1739.81Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A833QGC4_9POAL2.360e-1634.56THO complex subunit 3 isoform X2 n=1 Tax=Carex lit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 61..104
e-value: 1.6E-5
score: 34.4
coord: 107..145
e-value: 5.0
score: 12.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 74..103
e-value: 6.7E-4
score: 20.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 72..113
score: 11.244
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..141
e-value: 1.4E-21
score: 79.2
IPR040132TREX component Tex1/THOC3PANTHERPTHR22839THO COMPLEX SUBUNIT 3 THO3coord: 10..145
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 91..105
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 72..113
score: 10.733
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 14..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18241contigEcto-sp13_S_contig18241:153..3317 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18241.5651.1mRNA_Ecto-sp13_S_contig18241.5651.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18241 153..3317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18241.5651.1 ID=prot_Ecto-sp13_S_contig18241.5651.1|Name=mRNA_Ecto-sp13_S_contig18241.5651.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=147bp
SSKKEKNTETDILGIYDMRTKKKLKSVKFTILAHDYKWSPNGEYIINATE
TGSIDVMAFGSTKPLSRVRSTKLAHTAPCKALAIDPFNRYLASGGDDGLV
SLWELDDFVCVRTIACEGEVRSLSFTPDGRFIAISMSGGGVEIVSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040132Tex1/THOC3
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf