prot_Ecto-sp13_S_contig18221.5643.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18221.5643.1
Unique Nameprot_Ecto-sp13_S_contig18221.5643.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length188
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18221.5643.1 vs. uniprot
Match: D7FYV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV4_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 7.890e-61
Identity = 137/190 (72.11%), Postives = 139/190 (73.16%), Query Frame = 0 
Query:    1 MSKALLMSYPEGGRETNTNHGGIYLGGSLDEPPMPSTPPPPLPASIATXXXLPARTSLVAASAK-PLPVRPTRGSGNNSST---SAGQHPAATKGNIWLAKAGLTRKNVAGSSSPAPTPTETPARESGSWRQGGGTPTHLAGVRAGGGMAAARAKGASGAWAKLHRRLEEESKNFTVKRRAEVVPPVVTS 186
            MSKALLMS PEGGRETNTNHGG  LGGSLDEPPMPSTPPPPLPASIATXXXLPAR SLV A+ K PLP RPTRGS         SAGQ PAA KGNIWLAKAGLTRK+VAGSS                       PTHLA       MAAARAKGASGAWAKLHRRLEEESKNF  KRRAEVVPPVVTS
Sbjct: 1048 MSKALLMSCPEGGRETNTNHGGSCLGGSLDEPPMPSTPPPPLPASIATXXXLPARNSLVGANPKRPLPARPTRGSXXXXXXXXISAGQRPAAAKGNIWLAKAGLTRKHVAGSSXXXXXXXXXXXXXXXXXXXXXXXPTHLAXXXXXXXMAAARAKGASGAWAKLHRRLEEESKNFNGKRRAEVVPPVVTS 1237
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BLAST of mRNA_Ecto-sp13_S_contig18221.5643.1 vs. uniprot
Match: A0A6H5KWX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX8_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 4.270e-21
Identity = 54/60 (90.00%), Postives = 55/60 (91.67%), Query Frame = 0 
Query:  127 RQGGGTPTHLAGVRAGGGMAAARAKGASGAWAKLHRRLEEESKNFTVKRRAEVVPPVVTS 186
            R+GGGTPTHLAG RA GGMAAARAKGASGAWAKLHRRLEEESKNF   RRAEVVPPVVTS
Sbjct:  683 REGGGTPTHLAGGRADGGMAAARAKGASGAWAKLHRRLEEESKNFNGTRRAEVVPPVVTS 742
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18221.5643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYV4_ECTSI7.890e-6172.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWX8_9PHAE4.270e-2190.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18221contigEcto-sp13_S_contig18221:1245..2441 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18221.5643.1mRNA_Ecto-sp13_S_contig18221.5643.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18221 2..3504 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18221.5643.1 ID=prot_Ecto-sp13_S_contig18221.5643.1|Name=mRNA_Ecto-sp13_S_contig18221.5643.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=188bp
MSKALLMSYPEGGRETNTNHGGIYLGGSLDEPPMPSTPPPPLPASIATPP
PLPARTSLVAASAKPLPVRPTRGSGNNSSTSAGQHPAATKGNIWLAKAGL
TRKNVAGSSSPAPTPTETPARESGSWRQGGGTPTHLAGVRAGGGMAAARA
KGASGAWAKLHRRLEEESKNFTVKRRAEVVPPVVTSE*
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