prot_Ecto-sp13_S_contig1816.5608.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1816.5608.1
Unique Nameprot_Ecto-sp13_S_contig1816.5608.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length185
Homology
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Match: D7FGP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGP8_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 9.460e-41
Identity = 92/106 (86.79%), Postives = 94/106 (88.68%), Query Frame = 0
Query:   74 MTSAAVHSESVTSNHALKGRIQDWVLEANSAEDQGTGVXXXXXXXXXXXRDGSGTAGLEPLVNKIKIEVRYGSKRYNVTVDRNDVFHGIERLKTFVSRKKALESIT 179
            MTSAAV SESVTSNHALKGRIQDWVLEANSAEDQG+ V    XXXXXXX   SGTAG EP VNKIKIEVRYGSKRY+VTVDRNDVFHGIERLKTFVSRKKAL SIT
Sbjct:    1 MTSAAVGSESVTSNHALKGRIQDWVLEANSAEDQGSDVSVGKXXXXXXXXXXSGTAGWEPPVNKIKIEVRYGSKRYDVTVDRNDVFHGIERLKTFVSRKKALASIT 106          
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Match: D8LFP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP5_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 4.160e-23
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
Query:    1 MDVLLKRGRFKDSDHTKDKDGVAEWAPRQFLCPITQGLMMDPVVAQDGH 49
            MDVLLKRGRFKDSD TKDKDGV+EWAPRQFLCPITQGLMMDPVVAQDGH
Sbjct: 1365 MDVLLKRGRFKDSDDTKDKDGVSEWAPRQFLCPITQGLMMDPVVAQDGH 1413          
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Match: A0A835YDY4_9CHLO (U-box domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YDY4_9CHLO)

HSP 1 Score: 84.3 bits (207), Expect = 1.200e-15
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0
Query:   29 QFLCPITQGLMMDPVVAQDGHSYERHAILEWF----AVCRTNSRPPTSPMTSAAVHSESVTSNHALKGRIQDW 97
            +FLCPITQ LM DPVVA DGHSYER AI +W     A  R+  R PTSP+T A + S ++T N+AL+  I+DW
Sbjct:  734 EFLCPITQDLMSDPVVAADGHSYERAAIAQWLGAGAAAARSGRRGPTSPLTGAPLPSTALTPNYALRSMIRDW 806          
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Match: A0A7S1HBI4_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HBI4_HEMAN)

HSP 1 Score: 77.8 bits (190), Expect = 2.220e-15
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 0
Query:   27 PRQFLCPITQGLMMDPVVAQDGHSYERHAILEWFAVCRTNSRPPTSPMTSAAVHSESVTSNHALKGRIQD 96
            P +FLCPI+Q +M+DPV+A DGH+YER  I +WF VC+   +P  SP++   + SE +T NH L+  I D
Sbjct:   14 PDEFLCPISQCVMLDPVMAADGHTYERSQIQDWFNVCKIEGQPVRSPLSGENMPSEQLTPNHTLRKLITD 83          
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Match: D8TP11_VOLCA (U-box domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TP11_VOLCA)

HSP 1 Score: 75.9 bits (185), Expect = 5.280e-15
Identity = 40/73 (54.79%), Postives = 46/73 (63.01%), Query Frame = 0
Query:   27 PRQFLCPITQGLMMDPVVAQDGHSYERHAILEWFAVCRTNSRP--PTSPMTSAAVHSESVTSNHALKGRIQDW 97
            P + LCPIT  LM DPVVA DGHSYER AI  WFA      RP  PTSP+T A +    +T N+AL+  I DW
Sbjct:    4 PEELLCPITTDLMEDPVVAADGHSYERDAIARWFA-----GRPGRPTSPLTGAVLPHTGLTPNYALRKIIADW 71          
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Match: A0A7S0VW02_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VW02_9CRYP)

HSP 1 Score: 77.8 bits (190), Expect = 6.560e-14
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 0
Query:   27 PRQFLCPITQGLMMDPVVAQDGHSYERHAILEWFAVCRTNSRPPTSPMTSAAVHSESVTSNHALKGRIQD 96
            P +FLCPI+  +M+DPV+A DGH+YER  I +WF VC+   +P  SP++   + SE +T NHAL+  I D
Sbjct:  100 PDEFLCPISHSVMLDPVMAADGHTYERAQIEDWFNVCKVEGQPVRSPLSGEDMPSELLTRNHALRKLISD 169          
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Match: R1FFI5_EMIHU (U-box domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FFI5_EMIHU)

HSP 1 Score: 73.2 bits (178), Expect = 1.010e-13
Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = 0
Query:    8 GRFKDSDHTKDKDGVAEWAPRQFLCPITQGLMMDPVVAQDGHSYERHAILEWFAVCRTNSRPPTSPMTSAAVHSESVTSNHALKGRIQDW 97
            G+ +++   ++   + E  P  F+CPITQ LM DPV+A DGH+YERHA+  WFA   T      SP T AA+    +  NHA++ +I +W
Sbjct:    8 GQVREAGEAQEASPLPE-PPEIFVCPITQELMQDPVMATDGHTYERHAVERWFATRLT------SPKTGAALDLALLLPNHAMRHQIIEW 90          
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Match: A0A836B715_9CHLO (U-box domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B715_9CHLO)

HSP 1 Score: 77.8 bits (190), Expect = 2.310e-13
Identity = 42/96 (43.75%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   12 DSDHTKDKDGVAEWAPRQFLCPITQGLMMDPVVAQDGHSYERHAILEWFAVCRTNSRPPTSPMTSAAVHSESVTSNHALKGRIQDWVLEANSAEDQ 107
            D  +  +   + +  P  FLCPITQ LM DPVVA DG SYER AI +W A      R P SPMT+ A   +S+  N  LK +I  W  E  +A  Q
Sbjct:  939 DGGNVTEPASLPDDIPPLFLCPITQDLMQDPVVAADGFSYERLAIEQWIASSAAAGRAPRSPMTNLAFEHKSLVPNRVLKSQIAAWREEQAAAATQ 1034          
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Match: A0A7R9TLY4_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TLY4_MICPS)

HSP 1 Score: 74.3 bits (181), Expect = 2.410e-13
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   22 VAEWAPRQFLCPITQGLMMDPVVAQDGHSYERHAILEWFAVCRTNSRPPTSPMTSAAVHSESVTSNHALKGRI 94
             AE A + F CPITQ +M DPV+A DGH+YER AI EWF+  R+     TSP+T+  V S ++ +NHAL+G I
Sbjct:   98 AAETAAKAFHCPITQSVMRDPVIAVDGHTYERRAIEEWFSRGRS-----TSPVTNLRVSSTTLIANHALRGVI 165          
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Match: R1E9I7_EMIHU (U-box domain-containing protein n=4 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E9I7_EMIHU)

HSP 1 Score: 74.7 bits (182), Expect = 2.560e-13
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0
Query:   27 PRQFLCPITQGLMMDPVVAQDGHSYERHAILEWFAVCRTNSRPPTSPMTSAAVHSESVTSNHALKGRIQDW 97
            P  F+CPIT  +M DPV+A DGHSYER  I  W A         TSPMT  A+    +T NHAL+GRI++W
Sbjct:  127 PADFICPITTEVMSDPVMATDGHSYERKQIERWLAT------KSTSPMTGEALEHSILTPNHALRGRIREW 191          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1816.5608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGP8_ECTSI9.460e-4186.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LFP5_ECTSI4.160e-2395.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YDY4_9CHLO1.200e-1556.16U-box domain-containing protein n=1 Tax=Edaphochla... [more]
A0A7S1HBI4_HEMAN2.220e-1548.57Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
D8TP11_VOLCA5.280e-1554.79U-box domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S0VW02_9CRYP6.560e-1448.57Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
R1FFI5_EMIHU1.010e-1341.11U-box domain-containing protein (Fragment) n=1 Tax... [more]
A0A836B715_9CHLO2.310e-1343.75U-box domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A7R9TLY4_MICPS2.410e-1352.05Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
R1E9I7_EMIHU2.560e-1350.70U-box domain-containing protein n=4 Tax=Emiliania ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 29..97
e-value: 1.0E-20
score: 84.8
IPR003613U box domainPFAMPF04564U-boxcoord: 27..100
e-value: 1.7E-16
score: 60.1
IPR003613U box domainPROSITEPS51698U_BOXcoord: 25..104
score: 22.585
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 6..111
e-value: 4.4E-24
score: 86.3
NoneNo IPR availablePANTHERPTHR46573FAMILY NOT NAMEDcoord: 26..103
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 17..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1816contigEcto-sp13_S_contig1816:10863..14529 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1816.5608.1mRNA_Ecto-sp13_S_contig1816.5608.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1816 9787..15115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1816.5608.1 ID=prot_Ecto-sp13_S_contig1816.5608.1|Name=mRNA_Ecto-sp13_S_contig1816.5608.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=185bp
MDVLLKRGRFKDSDHTKDKDGVAEWAPRQFLCPITQGLMMDPVVAQDGHS
YERHAILEWFAVCRTNSRPPTSPMTSAAVHSESVTSNHALKGRIQDWVLE
ANSAEDQGTGVSVGKGKGKQKHRDGSGTAGLEPLVNKIKIEVRYGSKRYN
VTVDRNDVFHGIERLKTFVSRKKALESITRRRPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD