prot_Ecto-sp13_S_contig18149.5602.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18149.5602.1
Unique Nameprot_Ecto-sp13_S_contig18149.5602.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length321
Homology
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Match: D7FR72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR72_ECTSI)

HSP 1 Score: 467 bits (1202), Expect = 8.950e-160
Identity = 294/320 (91.88%), Postives = 298/320 (93.12%), Query Frame = 0
Query:    1 SGDIRHALLNLQMSVGGRGGSGSTAAATAAAAVGRSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGQRDTFLTQFHALGKLLYAKRAPPDSDGASGWPTAGGGXXXXXXEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSRGYDGGGEQGVFPQRYAESIASRATAASNRHPAKSRMRAFGAPKSFEMRRSRKEASGALRRFVGDAWDASGGDADALWASSRHLKEAVDTDLLPTARLITGEWEAEAALRSLLQRFMQDKEQQQEGQQQ 320
            +GDIRHALLNLQMSVGGRGGSGSTAAA   AAVGRSN          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     QRDTFLTQFHALGKLLYAKR PPDSDGA GWPTAGGGXXXXXXEGRGPLAFVPE+VLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDAD+FASRMFDSSRGYDGGGEQ VFPQRYAESIASRATA SNRHPAKSRMRAFGAPKSFEMRRSRKEASGALRRFVGDAWDASGGDADALWASSRHLKEAVDTDLLPTARLITGEWEAEAALRSLLQRFMQD+EQQQEGQQQ
Sbjct:  178 TGDIRHALLNLQMSVGGRGGSGSTAAA---AAVGRSNGGRGRAKRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----QRDTFLTQFHALGKLLYAKRVPPDSDGAGGWPTAGGGXXXXXXEGRGPLAFVPEDVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADMFASRMFDSSRGYDGGGEQAVFPQRYAESIASRATAVSNRHPAKSRMRAFGAPKSFEMRRSRKEASGALRRFVGDAWDASGGDADALWASSRHLKEAVDTDLLPTARLITGEWEAEAALRSLLQRFMQDREQQQEGQQQ 489          
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Match: A0A6H5KBK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBK1_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 2.120e-71
Identity = 159/194 (81.96%), Postives = 160/194 (82.47%), Query Frame = 0
Query:    1 SGDIRHALLNLQMSVGGRGGSGSTAAATAAAAVGRSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTGQRDTFLTQFHALGKLLYAKRAPPDSDGASGWPT--AGGGXXXXXXEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSR 192
            +GDIRHALLNLQMSVGGRG SGSTAAA AAAAVGRSN         XXXXXXXXXXXXXXX     XXXX    XXXXX   GTGQRDTFLTQFHALGKLLYAKR PPDSDGA GWPT  AGG       EGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSR
Sbjct:  308 AGDIRHALLNLQMSVGGRGRSGSTAAAKAAAAVGRSNGGRGQAMLSXXXXXXXXXXXXXXXGRKKRXXXXSKSCXXXXXAG-GTGQRDTFLTQFHALGKLLYAKRNPPDSDGAGGWPTTGAGGERGDGGVEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSR 500          
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Match: A0A7S2PU50_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PU50_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.880e-24
Identity = 69/160 (43.12%), Postives = 89/160 (55.62%), Query Frame = 0
Query:   86 QRDTFLTQFHALGKLLYAKRAPPDSDGASGWPTAGGGXXXXXXEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSRGYDGGGEQGVFPQRYAESIASRATAASNRHPAKSRMRAFGAPKSFEMRRSRKE 245
            +RDT L+ FHALGKL++AKR P   D                 +GRGPL F PE++LS+ GM +  A++FL YHC D++TD +E+S+    FS+AD+F SR       Y GG  Q      YA SI SRA A SNR PA    R   APK F + +   E
Sbjct:  210 KRDTKLSMFHALGKLIHAKRKPLCQDTME--------ETKMWDDGRGPLEFDPEDILSRSGMAVGSAVSFLSYHCPDYFTDITEMSRAFDRFSEADMFVSRF------YQGGAGQSTL--EYASSIGSRAIADSNRTPAPPAFRQLSAPKVFGVMKKSSE 353          
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Match: K0R928_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R928_THAOC)

HSP 1 Score: 114 bits (284), Expect = 2.010e-24
Identity = 81/210 (38.57%), Postives = 106/210 (50.48%), Query Frame = 0
Query:   87 RDTFLTQFHALGKLLYAKRAPPDSDGAS-----GWPTAGGGXXXXXXEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSRGYDGGGEQGVFPQRYAESIASRATAASNRHPAKSRMRAFGAPKSFEMRRSRKEASGALRRFVGDAWDASGGDAD-ALWASSRHLKEAVDTDLLPTARLI 290
            +D  L+ FHALGKLLYAKR P + D A        P           +GR PL F P+ VLS   M  D   +F+ YHC DF+TD ++L   +G  SDA VF  R   +     G G  G +P  YA ++  RA A  NR+PA  R R   AP+S+ + R  +E +  L    G    +S GD   A   S   L E V TD+LP AR++
Sbjct:  365 KDARLSMFHALGKLLYAKRGPREEDDAGRSRFGSDPAISEAVRRAWDDGRPPLLFDPDRVLSTIEMGPDAGTSFVSYHCPDFHTDPTDLDGTIGTLSDAAVFLDRSMRAG----GSGSDGPYPTDYAVALGGRAVAVFNRNPAPPRFRKLTAPESYGVMRKERENARRLVGIRGRLLASSSGDGGGAPRPSVGGLAEFV-TDVLPHARIV 569          
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Match: A0A7S4UW67_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UW67_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.570e-24
Identity = 78/179 (43.58%), Postives = 95/179 (53.07%), Query Frame = 0
Query:   85 GQRDTFLTQFHALGKLLYAKRAPPDSDG-ASGWPTAGGGXXXXXXE------------------GRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSRGYDGGGEQGVFPQRYAESIASRATAASNRHPAKSRMRAFGAPKSFEMRRSRK 244
            G+RDT L+ FHALGKLLYAKR     DG A    TA         E                   R PL FVPE V+++  +    AL+FL YH  DF+T+E+ELS+    FSDA VF  R FD+ R +       VFP  Y  SIA RA A +NRHPA  R RA  APK FE+ R ++
Sbjct:  320 GERDTKLSTFHALGKLLYAKRK---KDGVAKAQETASLFSHALKPEWHATNEQFIRKPSDIWKDSRPPLDFVPEAVMNESDIGRGGALSFLSYHSPDFFTNETELSKVFDLFSDAAVFLDRSFDTQRDHS----DAVFPLEYVSSIAGRAIADTNRHPAPHRFRALDAPKVFEVMRKKR 491          
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Match: A0A7S1V8V5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V8V5_9STRA)

HSP 1 Score: 105 bits (261), Expect = 8.570e-23
Identity = 67/160 (41.88%), Postives = 85/160 (53.12%), Query Frame = 0
Query:   84 TGQRDTFLTQFHALGKLLYAKR---APPDSDGASGWPTAGGGXXXXXXEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSRGYDGGGEQGVFPQRYAESIASRATAASNRHPAKSRMRAFGAPKSFEMR 240
            TG+RDT L+ FHALGK+LYAKR    P    G                  R PL F PE+V+    + L  A+ FL +H  DF+TD  ELS+ +  FSDA +   +   S++          FP RY ESIA RA A +N HPA ++ RA  APKS EMR
Sbjct:   76 TGKRDTRLSTFHALGKILYAKRQTDVPVSEPGE-----------------RPPLQFDPEKVIQHSDLYLTGAVGFLSFHSPDFFTDIEELSRAMDSFSDASILLQQTPQSAQ------LTTTFPDRYVESIAGRAIADANLHPAPTKFRALSAPKSSEMR 212          
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Match: B8C3M9_THAPS (RanBP2-type domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3M9_THAPS)

HSP 1 Score: 109 bits (272), Expect = 9.960e-23
Identity = 68/177 (38.42%), Postives = 91/177 (51.41%), Query Frame = 0
Query:   86 QRDTFLTQFHALGKLLYAKRAPPDSD---------GASGWPTAGGGXXXXXXEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSRGYDGGGEQGVFPQRYAESIASRATAASNRHPAKSRMRAFGAPKSFEMRRSRKEASGALRRF 253
            +RD  L+ FHALGKLLYAKR P   D         G S W            +GRGPL FVPE+VL +  M    A++F+ YH  DF+TD ++LS      SDA  F  R+         G   G FP  YA S+  RA A +N++PA S+ R   APK FE+   ++E    +++ 
Sbjct:  682 KRDVKLSTFHALGKLLYAKRKPRSQDPYSTTEKRTGISAW-----------DDGRGPLDFVPEQVLEKTDMATSSAISFIAYHSPDFFTDIAQLSDAFDSISDAGEFMDRL---------GQTDGPFPMDYASSLGGRAIADANKNPAPSQFRHLSAPKVFEVMNKKRENETKMKQL 838          
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Match: A0A7S2XHY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XHY2_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.370e-22
Identity = 64/176 (36.36%), Postives = 91/176 (51.70%), Query Frame = 0
Query:   86 QRDTFLTQFHALGKLLYAKRAPPDSDGASGWPTA--------GGGXXXXXXEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSRGYDGGGEQGVFPQRYAESIASRATAASNRHPAKSRMRAFGAPKSFEMRRSRKEASGALRRF 253
            QRDT L+ FHALGKLLYAKR     +      ++                 + R PL + PE V+++  +    AL+FLQYHC +F++D  ELS  L  FSDA +F     D S    G     ++P  Y  S+  RA A +N+HPA +  R+FGAPK F++ R ++     + R 
Sbjct:   25 QRDTKLSTFHALGKLLYAKRKNATQEHPMRLLSSDVLVEEDPAFTRRLARIDARPPLEYDPERVMNESDIGRGGALSFLQYHCTEFFSDSIELSTALDRFSDAALF----LDRSTNPQGSHVDSIYPAEYVSSLGGRAVADANKHPAPNCFRSFGAPKIFDVLRKKRGNDAKMERL 196          
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Match: W7TS41_9STRA (Checkpoint protein Rad24 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS41_9STRA)

HSP 1 Score: 103 bits (257), Expect = 8.900e-21
Identity = 76/210 (36.19%), Postives = 111/210 (52.86%), Query Frame = 0
Query:   86 QRDTFLTQFHALGKLLYAKRAPPDSDGASGWPTAGGGXXXXXXEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSRGYDGGGEQGVFPQRYAESIASRATAASNRHPAKSR---MRAFGAPKSFEMRRSRKEASGALRRFVGDAWDASGGDADALWASSRHLK--EAVDTDLLPTARLI 290
            ++DT+++ FHALGK+L+AKR P   +   G             + RG L+FVPEEVL +  ME +   AF+Q H +  + D  EL++ + +F+DADV  +R++ ++   D       FP+ Y  SI  R  A SNRHPA  +    R   AP+ FE+ R R+E     RR      D  G  A A  ASS  +   E VD +++P A+ I
Sbjct:  666 RKDTYMSSFHALGKVLHAKRLPESDESRKG-----------EGDPRGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDR--TDATFPEEYVLSILGRTVAHSNRHPAGGQGTGFRGMTAPRYFEVLRQRRETG---RRLGLLCQDYVGKVARAGRASSIRMTVGEMVD-EMVPFAKQI 858          
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Match: A0A7S1D583_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D583_CYCTE)

HSP 1 Score: 99.4 bits (246), Expect = 5.310e-20
Identity = 67/160 (41.88%), Postives = 82/160 (51.25%), Query Frame = 0
Query:   86 QRDTFLTQFHALGKLLYAKRAPPDSDGASGWPTAGGGXXXXXXEGRGPLAFVPEEVLSQGGMELDWALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSRGYDGGGEQGVFPQRYAESIASRATAASNRHPAKSRMRAFGAPKSFEMRRSRKE 245
            QR   LT FHALGKLLYAKR                        GRG L F PEEVL   GM LD A  FLQ + +DF+TD SE S+    FSDA     R   SS   D      +FP  YA S+A+RA   +N HPA ++ R   APK++E+ R  ++
Sbjct:   98 QRAVSLTSFHALGKLLYAKRENSTL-------------------GRGQLLFDPEEVLETSGMSLDSATTFLQGNGLDFFTDISEWSKACCRFSDAATLLQRSSSSS---DSNHTTTLFPNGYAASLAARAVGDANHHPAPAKFRYLTAPKTYEVYRKARD 235          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18149.5602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FR72_ECTSI8.950e-16091.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KBK1_9PHAE2.120e-7181.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2PU50_9STRA1.880e-2443.13Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0R928_THAOC2.010e-2438.57Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S4UW67_9STRA2.570e-2443.58Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1V8V5_9STRA8.570e-2341.88Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
B8C3M9_THAPS9.960e-2338.42RanBP2-type domain-containing protein n=1 Tax=Thal... [more]
A0A7S2XHY2_9STRA3.370e-2236.36Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
W7TS41_9STRA8.900e-2136.19Checkpoint protein Rad24 n=2 Tax=Monodopsidaceae T... [more]
A0A7S1D583_CYCTE5.310e-2041.88Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004582Checkpoint protein Rad17/Rad24PANTHERPTHR12172CELL CYCLE CHECKPOINT PROTEIN RAD17coord: 1..320
NoneNo IPR availablePANTHERPTHR12172:SF0CELL CYCLE CHECKPOINT PROTEIN RAD17coord: 1..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18149contigEcto-sp13_S_contig18149:117..3538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18149.5602.1mRNA_Ecto-sp13_S_contig18149.5602.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18149 117..3540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18149.5602.1 ID=prot_Ecto-sp13_S_contig18149.5602.1|Name=mRNA_Ecto-sp13_S_contig18149.5602.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=321bp
SGDIRHALLNLQMSVGGRGGSGSTAAATAAAAVGRSNGGRGRAKRSGAAA
DAAAAAAAAGVGGRKKRGAGVSKSSAAGAAAGGTGQRDTFLTQFHALGKL
LYAKRAPPDSDGASGWPTAGGGGGDGGGEGRGPLAFVPEEVLSQGGMELD
WALAFLQYHCVDFYTDESELSQGLGYFSDADVFASRMFDSSRGYDGGGEQ
GVFPQRYAESIASRATAASNRHPAKSRMRAFGAPKSFEMRRSRKEASGAL
RRFVGDAWDASGGDADALWASSRHLKEAVDTDLLPTARLITGEWEAEAAL
RSLLQRFMQDKEQQQEGQQQH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004582Checkpoint_prot_Rad17_Rad24