prot_Ecto-sp13_S_contig18104.5574.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig18104.5574.1
Unique Name	prot_Ecto-sp13_S_contig18104.5574.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	296

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig18104.5574.1 vs. uniprot
Match: A0A6H5KE04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE04_9PHAE)

HSP 1 Score: 531 bits (1369), Expect = 3.570e-187
Identity = 263/295 (89.15%), Postives = 274/295 (92.88%), Query Frame = 0

Query:    1 AAAAAPKEEEYERNPEFLPVQADRLPGTPGGRLDVPSEIPEMEPADVWLGDLMRQAMTQENENATAQQQPKHEMKPDTSGGMSYPLGAQQQFFLSHLSGVGSVSYFLPKHLDEGHQPTARMNPTARATASWPPCHPAHHKQHTPQPSAPPASNVGWVKDAGSAVIGESPTTALYPSSTTNVRSPSMSTASTDVSPLQGPGTTSYDAFPQGDCRLDAVGGGARTATAGGVCGDLSSGSNGGPPLIRTGACGPHDHPVAAGGVFPGDMAAIKTEFCHHSFPPPGASSLGSSTHWSAF 295
            AAA APKEEEYER PEF  +QADRLPGTPGGRLD+PSEIPE+EPADVWLGDLMRQAMTQE+ENATAQQQPKHE KPDTSGGMSYPLGAQQQFFLSHLSGVG+VSYFLPKH+DE HQPTARMNPTARATASWPPCHPAHHKQHTPQPS PP+SNVGWVKDAGSAVIGESPTTALYPSSTTN R PSMSTAST VSP Q PG TSY+A PQGDCRLDAVGGGARTA AGGVCGDLSS SNGGPPL+R GA GPHDHP A+GGV PGDMAAIKTE+CHHSFPPPG SSLGSSTHWSAF
Sbjct:  176 AAAVAPKEEEYERIPEFQSLQADRLPGTPGGRLDMPSEIPELEPADVWLGDLMRQAMTQESENATAQQQPKHETKPDTSGGMSYPLGAQQQFFLSHLSGVGNVSYFLPKHVDESHQPTARMNPTARATASWPPCHPAHHKQHTPQPSVPPSSNVGWVKDAGSAVIGESPTTALYPSSTTNARCPSMSTASTGVSPFQRPGITSYNALPQGDCRLDAVGGGARTAGAGGVCGDLSSSSNGGPPLVRAGARGPHDHP-ASGGVLPGDMAAIKTEYCHHSFPPPGTSSLGSSTHWSAF 469

[Close]

BLAST of mRNA_Ecto-sp13_S_contig18104.5574.1 vs. uniprot
Match: D8LH44_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH44_ECTSI)

HSP 1 Score: 517 bits (1331), Expect = 9.780e-184
Identity = 261/291 (89.69%), Postives = 266/291 (91.41%), Query Frame = 0

Query:    7 KEEEYERNPEFLPVQADRLPGTPGGRLDVPSEIPEMEPADVWLGDLMRQAMTQENENATAQQQPKHEMKPDTSGGMSYPLGAQQQFFLSHLSGVGSVSYFLPKHLDEGHQPTARMNPTARATASWPPCHPAHHKQHTPQPSAPPASNVGWVKDAGSAVIGESPTTALYPSSTTNVRSPSMSTASTDVSPLQGPGTTSYDAFPQGDCRLDAVGGGARTATAGGV--CGDLSSGSNGGPPLIRTGACGPHDHPVAAGGVFPGDMAAIKTEFCHHSFPPPGASSLGSSTHWSAF 295
            KEEEYER PEF  +QADRLPGTPGGRLD+P EIPEMEPADVWLGDLMRQAMTQENENATAQQQPK EMKPDTSGGMSYPL AQQQFFLSHLSGVGSVSYFLPKHLDEGH+PTARMNPTARATASWPPCHP HHKQHTPQPS PP+SNVGWVKDAGSAVIGESPTTALYPSSTTNVRSPSMSTASTDVSPLQGPG TSYDA PQGDCRLDAV  GARTA+ GG    GDLSS S G PPLIR GA GPHDHPVAAGGVFPGDMAAIK EFCHHSF PPGASSLGSS HWSAF
Sbjct:   28 KEEEYERIPEFQSLQADRLPGTPGGRLDMPPEIPEMEPADVWLGDLMRQAMTQENENATAQQQPKREMKPDTSGGMSYPLRAQQQFFLSHLSGVGSVSYFLPKHLDEGHRPTARMNPTARATASWPPCHPVHHKQHTPQPSVPPSSNVGWVKDAGSAVIGESPTTALYPSSTTNVRSPSMSTASTDVSPLQGPGITSYDALPQGDCRLDAVSCGARTASCGGGGGVGDLSSSSIGEPPLIRAGARGPHDHPVAAGGVFPGDMAAIKAEFCHHSFAPPGASSLGSSPHWSAF 318

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig18104.5574.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig18104.5574.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KE04_9PHAE	3.570e-187	89.15	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LH44_ECTSI	9.780e-184	89.69	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..69

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig18104	contig	Ecto-sp13_S_contig18104:2661..3548 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig18104.5574.1	mRNA_Ecto-sp13_S_contig18104.5574.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig18104 2661..3548 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig18104.5574.1 ID=prot_Ecto-sp13_S_contig18104.5574.1|Name=mRNA_Ecto-sp13_S_contig18104.5574.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=296bp
AAAAAPKEEEYERNPEFLPVQADRLPGTPGGRLDVPSEIPEMEPADVWLG
DLMRQAMTQENENATAQQQPKHEMKPDTSGGMSYPLGAQQQFFLSHLSGV
GSVSYFLPKHLDEGHQPTARMNPTARATASWPPCHPAHHKQHTPQPSAPP
ASNVGWVKDAGSAVIGESPTTALYPSSTTNVRSPSMSTASTDVSPLQGPG
TTSYDAFPQGDCRLDAVGGGARTATAGGVCGDLSSGSNGGPPLIRTGACG
PHDHPVAAGGVFPGDMAAIKTEFCHHSFPPPGASSLGSSTHWSAF*