prot_Ecto-sp13_S_contig18091.5566.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18091.5566.1
Unique Nameprot_Ecto-sp13_S_contig18091.5566.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length661
Homology
BLAST of mRNA_Ecto-sp13_S_contig18091.5566.1 vs. uniprot
Match: A0A6H5KJL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL2_9PHAE)

HSP 1 Score: 738 bits (1904), Expect = 1.240e-244
Identity = 462/555 (83.24%), Postives = 478/555 (86.13%), Query Frame = 0
Query:    1 MREGGCGRSLPLAGGSPLLPKRQHQPQRRHEGDDVRGEDGHRPNNPSGDPRALARDLLAAGAQAEVPPLSPRKAPKGETANPEKAEGTEDIGTVGVATAVVSQFSTPTPLATGASRDVSDRARASSERMASRTAXXXXXXXXXXXXXXQESGEHHGKGWPNESAVHGARDGNKDESTNSIRHDSDVGHNENSATATATSATTENTAPSTGLEQQLLSMLSGARRGSXXXXXSLSANDAPPGGAGRLQGPRARRLRLNAWSARPTSTRASPSAESSAPTAGGTRVSARCALGEAARGLGVAPSCFPPPAPHHLASSRLPSVGDGDAPFRGQFSAETGHAAVGRLSAEWPSPNPVGASPSGSSGRESRAGPAXXXXXXXXXXXXXXXXXXXXXXXXX-------------TAASSSPFSGTGSRPGGMRPG---QPNQGFGGGGVSVSPRDAQPLLHSDEPGPPSDGRTDIGGDGGGSDGGGYVNVVTGLENEPGEGCRGVGXXXXXGLDGRHRDGGLPRGSSSDGIGKVGSGSPTAVEQENDKSQRRLGGDQYANA 539
            MREGGCGRSLPLAGGSPL+P+RQHQ QRRHEGDDVRGEDGHRPNNPSGDPRALAR+LLAAG  AEVPPLSPRKAPK ETA+PE+AEGTE I T+GVATAVVSQ STP PLA GASR+VSDRARASS+RMASRTA    XXXXXX    +ESGEHHG GWP+ESAVHGARDGN DESTNSIRHDSDVGHNENSATA  TSATTENTAPSTGLEQQLLSMLSGAR   XXXXX LSANDAPPGGAGRLQGPRARRLRLNAWSARPTSTRASPSA+SSAPTAGGT VSARCALGEAARG GVAPSCFPPPAPHHLASSRLPSVGDGDAPFRG FSAET  AAVGRLSAEWPSP+P GASPSGSSGRE RAGP    XXXXXXXXXXXXXXXXXXXXXX             T ASSSPFSGTG RPGG+RPG   QPNQGF GGGVSVSPRDA+ LLHSDEPGPPSDGRTD  G GGGSD GGY   VTGLENEPGEGC GVG     GL GRHRDGGL R SSSD IGKVGSGS T VEQENDKSQRR GG+Q+A A
Sbjct: 1190 MREGGCGRSLPLAGGSPLIPQRQHQQQRRHEGDDVRGEDGHRPNNPSGDPRALARELLAAGGHAEVPPLSPRKAPKDETADPEQAEGTEGIRTMGVATAVVSQCSTPPPLAMGASRNVSDRARASSDRMASRTAAGSGXXXXXX----RESGEHHGNGWPHESAVHGARDGNNDESTNSIRHDSDVGHNENSATAATTSATTENTAPSTGLEQQLLSMLSGARXXXXXXXXRLSANDAPPGGAGRLQGPRARRLRLNAWSARPTSTRASPSAQSSAPTAGGTAVSARCALGEAARGSGVAPSCFPPPAPHHLASSRLPSVGDGDAPFRGPFSAETSRAAVGRLSAEWPSPSPSGASPSGSSGREYRAGPGEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTDASSSPFSGTGRRPGGLRPGRRCQPNQGFDGGGVSVSPRDARLLLHSDEPGPPSDGRTD--GGGGGSDSGGYGGDVTGLENEPGEGCIGVGVSRGGGLVGRHRDGGLSRESSSDDIGKVGSGSLTPVEQENDKSQRRRGGEQHAEA 1738          
BLAST of mRNA_Ecto-sp13_S_contig18091.5566.1 vs. uniprot
Match: D7G795_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G795_ECTSI)

HSP 1 Score: 514 bits (1325), Expect = 2.510e-162
Identity = 355/517 (68.67%), Postives = 365/517 (70.60%), Query Frame = 0
Query:  149 QESGEHHGKGWPNESAVHGARDGNKDESTNSIRHDSDVGHNENSATATATSATTENTAPSTGLEQQLLSMLSGARRGSXXXXXSLSANDAPPGGAGRLQGPRARRLRLNAWSARPTSTRASPSAESSAPT--AGGTRVSARCALGEAARGLGVAPSCFPPPAPHHLASSRLPSVGDGDAPFRGQFSAETGHAAVGRLSAEWPSPNPVGASPSGSSGRESRAGPAXXXXXXXXXXXXXXXXXXXXXXXXXTAASSSPFSGTGSRPGGMRPG---QPNQGFGGGGVSVSPRDAQPLLHSDEPGPPSDGRTDIGGDGGGSDGGGYVNVVTGLENEPGEGCRGVGXXXXXGLDGRHRDGGLPRGSSSDGIGKVGSGSPTAVEQENDKSQRRLGGDQYANAAEAPRVRQKQQHXXXXXXXXXXXXAWYGRDTTSIDSGGSRRRSSGERGLDPKRPPVRRHQQRREQRRSXXXXHDXXXXXXXNRYGHRHELEYQQQDSLGMEEESQIVTYGEQYNPATGWIR 660
            QESGEHHGKGWPNE AVHGARDGNKDE+TNSIRHDSDVGHN+NSA A                               XXXXXSLSANDAPPGGAGRLQGPRARRLRLNAWSARPTSTRASPSAESSAPT  AGGT VS R ALGEAARG GVAPSCFPPPAPHHLASSRLP VGDG  PFRG FSAETGHAAVGRLSAE  S            GRESRAGP                          TAAS SP SGTG RPGG+RPG   Q N+GF G GV V PRDA+PLLHS EPGPPSDG+TD  G            VV GLENEPGE CRG G     GLDGRHRDG LP GSSSDG GK GSGS TA EQENDKSQRR GG+QY  AAEAPR +     XXXXXXXXXXXX WYGRDT+SI           ERGLDPKRPPVRRHQQRREQ R XXXX  XXXXXX NR  HRHELEYQQQDSL +EEESQIVTYGEQYNPATGWIR
Sbjct: 1047 QESGEHHGKGWPNERAVHGARDGNKDETTNSIRHDSDVGHNDNSAKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSANDAPPGGAGRLQGPRARRLRLNAWSARPTSTRASPSAESSAPTCTAGGTGVSTRGALGEAARGSGVAPSCFPPPAPHHLASSRLPPVGDGGTPFRGPFSAETGHAAVGRLSAEGSSSXXXXXXXXXXXGRESRAGPGAAAAAAPMIFVADNVDENDRG----TAASFSPLSGTGRRPGGLRPGRRCQQNEGFDG-GVGVPPRDARPLLHSHEPGPPSDGKTD--GXXXXXXXXXXXXVVVGLENEPGECCRGGGG----GLDGRHRDGSLPSGSSSDGTGKFGSGSLTAAEQENDKSQRRRGGEQYPTAAEAPRGQDNXXXXXXXXXXXXXXXXWYGRDTSSIXXXXXXXXXXSERGLDPKRPPVRRHQQRREQXRPXXXXXXXXXXXXENRCWHRHELEYQQQDSLEVEEESQIVTYGEQYNPATGWIR 1552          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18091.5566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJL2_9PHAE1.240e-24483.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G795_ECTSI2.510e-16268.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18091contigEcto-sp13_S_contig18091:173..2495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18091.5566.1mRNA_Ecto-sp13_S_contig18091.5566.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18091 2..2957 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18091.5566.1 ID=prot_Ecto-sp13_S_contig18091.5566.1|Name=mRNA_Ecto-sp13_S_contig18091.5566.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=661bp
MREGGCGRSLPLAGGSPLLPKRQHQPQRRHEGDDVRGEDGHRPNNPSGDP
RALARDLLAAGAQAEVPPLSPRKAPKGETANPEKAEGTEDIGTVGVATAV
VSQFSTPTPLATGASRDVSDRARASSERMASRTAAGGGGGGGGGGSERQE
SGEHHGKGWPNESAVHGARDGNKDESTNSIRHDSDVGHNENSATATATSA
TTENTAPSTGLEQQLLSMLSGARRGSGGGGGSLSANDAPPGGAGRLQGPR
ARRLRLNAWSARPTSTRASPSAESSAPTAGGTRVSARCALGEAARGLGVA
PSCFPPPAPHHLASSRLPSVGDGDAPFRGQFSAETGHAAVGRLSAEWPSP
NPVGASPSGSSGRESRAGPAAAAAAAAAAAPMIFAADNGDENDGGTAASS
SPFSGTGSRPGGMRPGQPNQGFGGGGVSVSPRDAQPLLHSDEPGPPSDGR
TDIGGDGGGSDGGGYVNVVTGLENEPGEGCRGVGGGGGGGLDGRHRDGGL
PRGSSSDGIGKVGSGSPTAVEQENDKSQRRLGGDQYANAAEAPRVRQKQQ
HRQEEHAGGGAAEAWYGRDTTSIDSGGSRRRSSGERGLDPKRPPVRRHQQ
RREQRRSQRQQHDRRQRNQENRYGHRHELEYQQQDSLGMEEESQIVTYGE
QYNPATGWIR*
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