mRNA_Ecto-sp13_S_contig18067.5553.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Match: D7FWG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG8_ECTSI) HSP 1 Score: 321 bits (822), Expect = 2.130e-108 Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 1
Query: 1 YELAYHDWTQIKICGCTRFNMTRTDDRVKDAFTTKCPYEADEGEMFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSS 468
YELAYHDWTQIKICGCTRFNMTRTDDR+KDAFTTKCPYEADEGE FLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWR+ EGQYERAIQLQCVEILGRRAFVGINFLSREPLV PRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSS
Sbjct: 166 YELAYHDWTQIKICGCTRFNMTRTDDRIKDAFTTKCPYEADEGETFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRTIEGQYERAIQLQCVEILGRRAFVGINFLSREPLVAPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSS 321
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Match: A0A6H5J6T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6T5_9PHAE) HSP 1 Score: 272 bits (696), Expect = 7.300e-92 Identity = 133/141 (94.33%), Postives = 135/141 (95.74%), Query Frame = 1
Query: 61 MTRTDDRVKDAFTTKCPYEADEGEMFLINMREVIDRSSPGSFKEYAFYNKWDNKV-----VALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSS 468
MTRTDDR+KDAFTTKCP+EADEGE FLINMREVIDRSSPGSFKEYAFYNKWDNKV VALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSS
Sbjct: 1 MTRTDDRIKDAFTTKCPHEADEGETFLINMREVIDRSSPGSFKEYAFYNKWDNKVPNRWVVALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSS 141
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Match: A0A835Z448_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z448_9STRA) HSP 1 Score: 169 bits (427), Expect = 2.000e-49 Identity = 81/185 (43.78%), Postives = 109/185 (58.92%), Query Frame = 1
Query: 1 YELAYHDWTQIKICGCTRFNMTRTDDRVKDAFTTKCPYEADEGEMFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNEG-----------------------------QYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYPTSS 468
YELAYHDWTQ ICGCTRFNMTR ++D FTT+CP G+ + +NM I+ ++PG F E AFY W N V+ +W + Y +AIQ+QCVE++GRRAFVGINFLSR P+ ++EM+++A+ LG+A GG+ AEME V H C+YP ++
Sbjct: 60 YELAYHDWTQYSICGCTRFNMTRRATTIEDMFTTQCPRSI--GQTYAVNMSMAINPATPGQFLEKAFYTDWPNMVLDVWAEGDAPAPALGAGXXXXXXXXXXXXXXXXGKPRRHYGKAIQMQCVEVMGRRAFVGINFLSRTPVTSDAELAEMWERAERLGIARYGGNRAEMERVDHTNCKYPRTT 242
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Match: A0A7S4GKE7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GKE7_9EUGL) HSP 1 Score: 94.7 bits (234), Expect = 1.110e-19 Identity = 58/161 (36.02%), Postives = 83/161 (51.55%), Query Frame = 1
Query: 1 YELAYHDWTQIKICGCTRFNMTRTDD--RVKDAFTTKCPYE------------ADEGEMFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIVRH 441
YE+A+HD+TQ K T F++ T+D R D F K P A+ FL I+ +PG +E F + N +V + + + G+Y+ AIQ QC+E G R F GINFLSR+PL+ M +M ++A+ GL G SP +M V H
Sbjct: 424 YEVAFHDYTQFKEVYDTTFDIRLTEDGKRWLDDFEVKGPSPQNNPTSWDRSPVANGAHYFLYGK---INPQTPGELQESGFGVIFPNYIVDVKKDDNGEYQEAIQFQCLERGGVRVFEGINFLSRKPLMTDAEMDQMHERARIAGLYPYGASPEQMHYVEH 581
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Match: A0A8J2SZD2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZD2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 4.340e-15 Identity = 50/158 (31.65%), Postives = 72/158 (45.57%), Query Frame = 1
Query: 1 YELAYHDWTQIKICGCTRFNM-------TRTDDRVKDAFTTKCPYEADEGEMFLIN----MREVIDRSSPGSFKEYAFYNKWDNKVVALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIVRH 441
YE AYHDWTQ T ++ T DD + + + G + +D + PG E F N + N +V + + +G Y+ AIQ QC+E G R F GINFLSR+ + P + F +A G+A G P +M +V H
Sbjct: 732 YEHAYHDWTQFAEVYDTTLDIDLAADGRTWVDDFAVRGPSPRAAPRSWRGSPVANGAHYPLYGSLDPAKPGELLESGFGNVFPNFIVDVTKDAQGNYQDAIQFQCLESGGVRVFEGINFLSRDREISPARLQGFFDRAAKAGMAPYGARPDQMHVVEH 889
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Match: A0A1S3IKG3_LINUN (uncharacterized protein LOC106165176 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IKG3_LINUN) HSP 1 Score: 77.0 bits (188), Expect = 1.720e-14 Identity = 57/164 (34.76%), Postives = 72/164 (43.90%), Query Frame = 1
Query: 1 YELAYHDWTQ-IKICGCTRFNMTRTDDRVK--DAFTTKCPYEADEGEMFLINMREVIDRSSPGSFKEYAFYNKWD--------NKVVALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYP 459
YELAYHD+TQ I C C R N + K D F+ C +N V + S + F W + VVAL +G YE I+ QCVE+LGR FVGINF R V + MF+ A+ GL ++ IV H C YP
Sbjct: 50 YELAYHDYTQPIGRCRCQRANKVYKPEEGKLYDYFSLYC-----------VNHTYVNNLSFKITNVTGYFEGHWPILPSVVFPDTVVALQVGKDGNYEWVIEFQCVEVLGRIDFVGINFYHRRNNVTKDELEGMFKVARQQGLGEYMDYGPKVTIVDHRNCVYP 202
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Match: A0A1S3IKP5_LINUN (uncharacterized protein LOC106165222 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IKP5_LINUN) HSP 1 Score: 76.3 bits (186), Expect = 3.320e-14 Identity = 49/161 (30.43%), Postives = 71/161 (44.10%), Query Frame = 1
Query: 1 YELAYHDWTQIKICGCTRFNMTRTDDRVKDAFTTKCPYEADEGEMFLINMREVIDRSSPGSFKEYAFYNKWD--------NKVVALWRSNEGQYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIVRHEGCRYP 459
YE+AYHD+TQ K+C C R N + + K D G ++ +N + + S + F W + VVA+ G Y I+ QCV+I R FVGINF R V + MF+ A+ GL ++ +V H+ C YP
Sbjct: 51 YEVAYHDYTQPKLCRCQRSNKHYSPENKKIY---------DYGSLYCVNKTYIQNLSFALTNVTGYFEGHWPLVPTVVFPDTVVAVQLDARGNYVWVIEFQCVQIFNRIDFVGINFYHRRNNVTTAELDSMFKVARQQGLGEYMDYGPKVTLVDHKNCVYP 202
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Match: A0A7S2B9H5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B9H5_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 9.640e-14 Identity = 56/171 (32.75%), Postives = 80/171 (46.78%), Query Frame = 1
Query: 1 YELAYHDWTQIKICGCTR----FNMTRTDDRVKDAFTTKCPYEADEGEMFLINMREVIDRSSPGS-------FKEYAFYNKWDNKVVALWRSNEGQYERAIQLQCVEIL-GRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGI------GGSPAEMEIVRHEGCRYP 459
YELAYHD+TQ KICGC R + T ++ D FT KCP A G+ + ++ +++ + PGS FK+ D + R Y ++ QCVE G F G+N SR+ +++EM + A A GL +PA + IV H C YP
Sbjct: 23 YELAYHDYTQPKICGCERSVKTVDTTVDPVQIHDLFTLKCP--APNGKDQITHLEFLVNDTVPGSLSGDCSFFKQSVDGTCPDYLIDVGTRVPGEPYPWVLEFQCVEKKNGDLLFAGVNMYSRDK--SEASLTEMIESADAHGLTPFIEQSERWFAPAGLTIVNHTDCTYP 189
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Match: A0A7S1BXM1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BXM1_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.790e-13 Identity = 52/160 (32.50%), Postives = 72/160 (45.00%), Query Frame = 1
Query: 1 YELAYHDWTQIKICGCTRFNMTRTDDRVK--DAFTTKCPYEADE------------GEMFLINMREVIDRSSPGSFKEYAFYNKWDNKVVALWRS-NEGQYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIV 435
YE +HDWTQ K T ++ T D D F K P A FL + D PG +E F ++ N +V + R+ G+Y+ AIQ QC+E G R F GINF+SR P + + EM +A+ G+ G P +M V
Sbjct: 822 YEQKFHDWTQFKEVYDTTLDIKLTPDGTGWIDDFGVKGPAPASAKLSWDKSPVANGAHYFLFGRVDPAD--PPGVLRESGFGVEFPNYIVDVKRNPTTGEYDEAIQFQCLERGGVRVFEGINFMSRRPQMDAAGLEEMHARAEKAGMYPYGADPEQMHTV 979
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Match: A0A7S2GTK0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GTK0_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 1.430e-6 Identity = 23/61 (37.70%), Postives = 39/61 (63.93%), Query Frame = 1
Query: 253 QYERAIQLQCVEILGRRAFVGINFLSREPLVPPRAMSEMFQKAKALGLAGIGGSPAEMEIV 435
+Y+ AIQ QC+E+ G R + GI+F+SR P + + +++M +A+ GL G SP +M +
Sbjct: 22 EYKEAIQFQCIEVGGVRLYEGIDFMSRNPEMSDKELTDMHARAERAGLYPYGASPEQMHRI 82 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18067.5553.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig18067.5553.1 >prot_Ecto-sp13_S_contig18067.5553.1 ID=prot_Ecto-sp13_S_contig18067.5553.1|Name=mRNA_Ecto-sp13_S_contig18067.5553.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=156bp YELAYHDWTQIKICGCTRFNMTRTDDRVKDAFTTKCPYEADEGEMFLINMback to top mRNA from alignment at Ecto-sp13_S_contig18067:732..1712- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig18067.5553.1 ID=mRNA_Ecto-sp13_S_contig18067.5553.1|Name=mRNA_Ecto-sp13_S_contig18067.5553.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=981bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18067:732..1712- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18067:732..1712- >mRNA_Ecto-sp13_S_contig18067.5553.1 ID=mRNA_Ecto-sp13_S_contig18067.5553.1|Name=mRNA_Ecto-sp13_S_contig18067.5553.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=468bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18067:732..1712- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |