prot_Ecto-sp13_S_contig18062.5550.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18062.5550.1
Unique Nameprot_Ecto-sp13_S_contig18062.5550.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length107
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18062.5550.1 vs. uniprot
Match: A0A6H5L9Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Z1_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 2.870e-58
Identity = 96/107 (89.72%), Postives = 100/107 (93.46%), Query Frame = 0 
Query:    1 MDAVLCSALSADNALRRGAEAALSYARTKRGFAIALAKQLASNYKYYPRGAYDGDGDMARPAAAAARERDGMWMPMRLMAGMLLQHFVRDRWELADDAVLPAEDKIQ 107
            MDAVLCSALSADN +RRGAEAALSYART+RGFAIALAKQLASNY  +PRGAY GDG+MAR A AA RERDGMWMPMRLMAGMLLQHFVRDRWELADDAVLPAEDKIQ
Sbjct:    1 MDAVLCSALSADNTVRRGAEAALSYARTQRGFAIALAKQLASNY--HPRGAYVGDGNMARAAPAAERERDGMWMPMRLMAGMLLQHFVRDRWELADDAVLPAEDKIQ 105
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BLAST of mRNA_Ecto-sp13_S_contig18062.5550.1 vs. uniprot
Match: D7G8B3_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8B3_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 1.400e-46
Identity = 89/107 (83.18%), Postives = 92/107 (85.98%), Query Frame = 0 
Query:    1 MDAVLCSALSADNALRRGAEAALSYARTKRGFAIALAKQLASNYKYYPRGAYDGDGDMARPAAAAARERDGMWMPMRLMAGMLLQHFVRDRWELADDAVLPAEDKIQ 107
            MDAVLCSALSADN +RRGAEAALSYART+RGFAIALAKQLASNY  YPRGAYDGD            ERDGMWMPMRLMAGMLLQHFVRD+WELADDAVLPAEDKIQ
Sbjct:    1 MDAVLCSALSADNTVRRGAEAALSYARTQRGFAIALAKQLASNY--YPRGAYDGDXXXXXXXXXXXXERDGMWMPMRLMAGMLLQHFVRDQWELADDAVLPAEDKIQ 105
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18062.5550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L9Z1_9PHAE2.870e-5889.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8B3_ECTSI1.400e-4683.18Importin N-terminal domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..107
e-value: 2.0E-7
score: 31.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18062contigEcto-sp13_S_contig18062:1075..1395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18062.5550.1mRNA_Ecto-sp13_S_contig18062.5550.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18062 1075..1395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18062.5550.1 ID=prot_Ecto-sp13_S_contig18062.5550.1|Name=mRNA_Ecto-sp13_S_contig18062.5550.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
MDAVLCSALSADNALRRGAEAALSYARTKRGFAIALAKQLASNYKYYPRG
AYDGDGDMARPAAAAARERDGMWMPMRLMAGMLLQHFVRDRWELADDAVL
PAEDKIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like