mRNA_Ecto-sp13_S_contig10035.56.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10035.56.1
Unique NamemRNA_Ecto-sp13_S_contig10035.56.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Match: D8LMY1_ECTSI (Protein-synthesizing GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMY1_ECTSI)

HSP 1 Score: 629 bits (1622), Expect = 2.580e-225
Identity = 319/320 (99.69%), Postives = 319/320 (99.69%), Query Frame = 1 
Query:   46 ESRRGRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFR*SKGSHHGDRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 1005
            ESRRGRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFR SKGSHHGDRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV
Sbjct:   29 ESRRGRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFR-SKGSHHGDRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 347
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BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Match: A0A835YYS7_9STRA (Protein-synthesizing GTPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYS7_9STRA)

HSP 1 Score: 511 bits (1316), Expect = 5.020e-178
Identity = 260/317 (82.02%), Postives = 287/317 (90.54%), Query Frame = 1 
Query:   58 GRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGP-GNFR*SKGSHHGDRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 1005
            G+  V +    VQTVRFKNELERNITIKLGYANAK++ A EGA  G  GN+  S+GS H D FEE+GK W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRLQNIIILQNKVDLVK DQA+LQHEQI++FVAGTVAD+AP+IPISAV++YN+DVVCEYI   IPIPVRDFTSVPRLI+IRSFD+NKPGEEV  LRGGVAGGSI+QG+LR+GDEIEVRPGIVTK+ +G+V+CEPI SKILSLYAEQNDL+FAVPGGLIGVGTR+DPTLTRADRLVGQVLGL+G LPDVFTEV
Sbjct:   81 GKSTVVKAISGVQTVRFKNELERNITIKLGYANAKVYNAQEGAREGELGNYT-SRGSAHADVFEENGKQWHLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKQDQALLQHEQIKRFVAGTVADNAPIIPISAVMRYNVDVVCEYICNNIPIPVRDFTSVPRLIVIRSFDINKPGEEVAGLRGGVAGGSILQGILRLGDEIEVRPGIVTKNSDGSVKCEPIMSKILSLYAEQNDLQFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVFTEV 396
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BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Match: A0A6S9GDD6_HETAK (Protein-synthesizing GTPase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GDD6_HETAK)

HSP 1 Score: 496 bits (1278), Expect = 1.440e-172
Identity = 254/316 (80.38%), Postives = 278/316 (87.97%), Query Frame = 1 
Query:   58 GRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFR*SKGSHHGDRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 1005
            G+  V +    VQTVRFKNELERNITIKLGYANAKI+KA      G G++R S GS   DRFEE GKTWEL RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRLQNIIILQNKVDLVK +QA+ QHEQI++FVAGTVAD APV+P+SAVLKYNIDVVCEY+   +P+PVRDFTSVPRLI+IRSFDVNKPGE VE LRGGVAGGSI+QGVLRVGDEIEVRPGIV KD  G V+C PIFSK++SLYAE NDL++AVPGGLIGVGTR+DPTLTRADRLVGQVLG +GNLP VFTE+
Sbjct:   66 GKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKAA--GEEGMGSYR-SWGSSKPDRFEEGGKTWELVRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKQEQALAQHEQIKRFVAGTVADAAPVVPVSAVLKYNIDVVCEYLAKDVPVPVRDFTSVPRLIVIRSFDVNKPGESVEGLRGGVAGGSILQGVLRVGDEIEVRPGIVAKDANGGVKCTPIFSKVVSLYAEANDLQYAVPGGLIGVGTRIDPTLTRADRLVGQVLGTRGNLPSVFTEI 378
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BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Match: A0A7S2XYP2_9STRA (Protein-synthesizing GTPase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYP2_9STRA)

HSP 1 Score: 490 bits (1262), Expect = 1.530e-170
Identity = 246/308 (79.87%), Postives = 281/308 (91.23%), Query Frame = 1 
Query:   91 VQTVRFKNELERNITIKLGYANAKIFKA---VEGAVPGPGNFR*SKGSHHGDRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 1005
            VQTVRFKNE+ERNITIKLGYANAKI++A    EG  P  G +R SKGS   D FEE G+TW L RHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL ++IILQNKVDLVK +QAM+QHEQI+KFVAGTVAD+APVIPISAVL+YNIDV CE+I   IP+PVRDFTS PRLI+IRSFDVNKPG+EVE+L GGVAGGSI+QGVL+VGDEIEVRPGIVTKDP+GNV+C+PI+S+I+SL+AEQNDL++AVPGGLIGVGT++DPTLTR+DR+VGQVLG +G+LPDVFTEV
Sbjct:   85 VQTVRFKNEMERNITIKLGYANAKIYQADKLEEGEAPQMGLYR-SKGSSTADVFEEGGRTWRLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEPCPQPQTSEHLAAVEIMRLNHVIILQNKVDLVKPEQAMVQHEQIKKFVAGTVADNAPVIPISAVLRYNIDVACEFIARNIPVPVRDFTSAPRLIVIRSFDVNKPGQEVENLLGGVAGGSIMQGVLKVGDEIEVRPGIVTKDPDGNVQCKPIYSQIVSLHAEQNDLQYAVPGGLIGVGTKIDPTLTRSDRMVGQVLGTRGHLPDVFTEV 391
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BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Match: A0A6U4HRZ6_9STRA (Protein-synthesizing GTPase n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HRZ6_9STRA)

HSP 1 Score: 479 bits (1234), Expect = 1.510e-165
Identity = 242/316 (76.58%), Postives = 276/316 (87.34%), Query Frame = 1 
Query:   58 GRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFR*SKGSHHGDRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 1005
            G+  V +    VQTVRFKNEL RNITIKLGYANAK++KA + A   PGN+R SKGS H D FEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRLQ+IIILQNKVDLVK + A+ QH+QIR+FVAGTVAD APVIP+SAVLKYN+DV+CEY+  ++P P RDF SVPRLI+IRSFDVNKPG E   LRGGVAGGSI+QGVLRVGD IE+RPGI++K+ +G++R EPI+S + SLYAEQNDL++AVPGGLIGVGT +DPTLTRADRLVGQVLGL+  LP +FTEV
Sbjct:   75 GKSTVVRSVSGVQTVRFKNELVRNITIKLGYANAKLYKARDAAPGVPGNYR-SKGSAHPDVFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEPCPQPQTSEHLAAVEIMRLQHIIILQNKVDLVKEEDALAQHQQIRRFVAGTVADSAPVIPMSAVLKYNVDVLCEYLVHRVPEPRRDFLSVPRLIVIRSFDVNKPGMEAAELRGGVAGGSILQGVLRVGDRIEIRPGILSKNNDGSMRAEPIYSVVKSLYAEQNDLQYAVPGGLIGVGTLIDPTLTRADRLVGQVLGLRDQLPSIFTEV 389
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BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Match: W7U2Z3_9STRA (Protein-synthesizing GTPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2Z3_9STRA)

HSP 1 Score: 477 bits (1228), Expect = 3.480e-165
Identity = 245/316 (77.53%), Postives = 272/316 (86.08%), Query Frame = 1 
Query:   58 GRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFR*SKGSHHGDRFEEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 1005
            G+  V +    V TVR K ELERNITIKLGYANAKI+K        PGN+R +KGS   D FEEDGKTW LQRHVSFVDCPGHDILMATMLNGAAVMDAALLL+AGNE CPQPQTSEHLAAVEIMRL NIIILQNKVDLVK   A +QH+QIRKFVAGTVAD +P+IPISAV K+NID+VCEY+  +IP+P RDFTS PRLI+IRSFDVNKPGE VE L+GGVAGGSI+QGVLRVGD+IEVRPGIVTKD +GNV+C PIFS+I SL+AE N+L FAVPGGLIGVGTR+DPTLTRADRLVGQVLGL+G LPDV+TEV
Sbjct:   34 GKSTVVKAISGVNTVRTKPELERNITIKLGYANAKIYKCDPAEEGVPGNYR-AKGSSAPDVFEEDGKTWRLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNEACPQPQTSEHLAAVEIMRLANIIILQNKVDLVKPADASMQHDQIRKFVAGTVADASPIIPISAVKKFNIDIVCEYLVNRIPVPPRDFTSSPRLIVIRSFDVNKPGELVEDLKGGVAGGSILQGVLRVGDQIEVRPGIVTKDAKGNVKCVPIFSQITSLFAEHNELDFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLRGQLPDVYTEV 348
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BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Match: K3WE95_GLOUD (Protein-synthesizing GTPase n=29 Tax=Oomycota TaxID=4762 RepID=K3WE95_GLOUD)

HSP 1 Score: 473 bits (1217), Expect = 1.690e-163
Identity = 246/319 (77.12%), Postives = 276/319 (86.52%), Query Frame = 1 
Query:   58 GRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFR*SKGSHHGDRFEE---DGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 1005
            G+  V +    VQTVRFKNELERNITIKLGYANAKI++A  G   G G +R + GS   DRF +   D   W LQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAA+EIMRLQNIIILQNKVDL+K D A  QHEQI+KFVAGTVA DAP+IPISAVLKYNIDVVCEYI   IPIP RDFTS P+LI+IRSFDVNKPGE+VE+L+GGVAGGSI++GVLRVGDEIEVRPGIV+KD EG + C PI+S+I+SL+AE+NDL+FAVPGGLIGVGTR+DPTLTR+DRLVGQVLGLKG+LP VFTE+
Sbjct:   48 GKSTVVRAISGVQTVRFKNELERNITIKLGYANAKIYRAENGT--GIGCYR-AFGSSKPDRFVDEVDDNTVWVLQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEVCPQPQTSEHLAAIEIMRLQNIIILQNKVDLIKEDAACAQHEQIKKFVAGTVAHDAPIIPISAVLKYNIDVVCEYICRNIPIPKRDFTSKPKLIVIRSFDVNKPGEDVENLKGGVAGGSILEGVLRVGDEIEVRPGIVSKDDEGKMTCVPIYSRIVSLFAEKNDLQFAVPGGLIGVGTRIDPTLTRSDRLVGQVLGLKGSLPHVFTEL 363
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BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Match: F0Y3F3_AURAN (Protein-synthesizing GTPase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3F3_AURAN)

HSP 1 Score: 471 bits (1211), Expect = 1.740e-162
Identity = 242/318 (76.10%), Postives = 271/318 (85.22%), Query Frame = 1 
Query:   58 GRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFR*SKGSHHGDRFEEDGK--TWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 1005
            G+  V +    VQTVRFKNELERNITIKLGYANAKI+K V+   PGPGNFR S GS   D F +      W+L RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRL+NIIILQNKVDLVK D A+ QHEQI+KFVAGTVAD AP+IPISAVLKYN+D VCEY+   IP P RDF S+PRLI+IRSFDVNKPGE+VEHL+GGVAGGSI+QGVL++GDE+EVRPGIV KD +G V C PI+SK++SL+AE N L++AVPGGLIGVGT +DPTLTRADRLVGQVLGLK +LPDVF EV
Sbjct:   56 GKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKRVD-EQPGPGNFR-SFGSSKPDAFTDPATKIAWKLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLENIIILQNKVDLVKPDAALAQHEQIKKFVAGTVADAAPIIPISAVLKYNVDAVCEYLAHAIPTPARDFASLPRLIVIRSFDVNKPGEDVEHLKGGVAGGSILQGVLKMGDEVEVRPGIVKKDAQGTVSCTPIYSKVVSLFAESNALQYAVPGGLIGVGTHIDPTLTRADRLVGQVLGLKAHLPDVFIEV 371
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BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Match: A0A7S4A8Q2_9STRA (Protein-synthesizing GTPase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8Q2_9STRA)

HSP 1 Score: 469 bits (1207), Expect = 5.190e-162
Identity = 247/317 (77.92%), Postives = 269/317 (84.86%), Query Frame = 1 
Query:   58 GRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAVEGAVPGPGNFR*SKGSHHGDRFEE-DGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGNVRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 1005
            G+  V +    VQTVRFKNELERNITIKLGYANAKI+K V    PGPGNF  S+GS   D FE+ DG  W L RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNE CPQPQTSEHLAAVEIMRL+NI+ILQNKVDLVK DQA  QHEQIRKFVAGTVA DAPVIPISAVLKYNID VCEY+   IP PVRDFTS PRLI+IRSFDVNKPGE+V +L+GGVAGGSI+QGVLR+ DE+EVRPGIVTKD  G V   PI+S++ SL AE+N L++AVPGGLIGVGT +DPTLTRADRLVGQVLGLKG LPDVF EV
Sbjct:   46 GKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKRVA-ERPGPGNFC-SRGSATPDAFEDGDGARWALARHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNEPCPQPQTSEHLAAVEIMRLENILILQNKVDLVKPDQARAQHEQIRKFVAGTVAGDAPVIPISAVLKYNIDAVCEYVAHAIPTPVRDFTSTPRLIVIRSFDVNKPGEDVANLKGGVAGGSILQGVLRLEDEVEVRPGIVTKDAAGAVTATPIYSRVASLLAERNRLEYAVPGGLIGVGTHIDPTLTRADRLVGQVLGLKGRLPDVFIEV 360
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BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Match: A0A7S2MPR4_9STRA (Protein-synthesizing GTPase n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2MPR4_9STRA)

HSP 1 Score: 470 bits (1209), Expect = 7.140e-162
Identity = 249/338 (73.67%), Postives = 278/338 (82.25%), Query Frame = 1 
Query:   58 GRHDVKQEHLAVQTVRFKNELERNITIKLGYANAKIFKAV-----------------EGAVPGPGNFR*SKGSHHGDRF--EEDGKTWELQRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLQNIIILQNKVDLVKHDQAMLQHEQIRKFVAGTVADDAPVIPISAVLKYNIDVVCEYINCKIPIPVRDFTSVPRLIIIRSFDVNKPGEEVEHLRGGVAGGSIVQGVLRVGDEIEVRPGIVTKDPEGN---VRCEPIFSKILSLYAEQNDLKFAVPGGLIGVGTRVDPTLTRADRLVGQVLGLKGNLPDVFTEV 1005
            G+  V +    VQTVRFKNELERNITIKLGYANAKI+K                   EG     G F  S+GS H D F  E+ G T+ L+RHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRL+NIIILQNKVDLVK D A+ QHEQIRKFVAGTVAD APVIPISAVLK+NIDVVCEY+  +IP+P+RDFTSVPRLI+IRSFDVNKPG++V+ L+GGVAGGSI+QGVLRVGDEIEVRPGIV + P+G+   + C PIFS++ SLYAE NDL+FAVPGGLIGVGTR+DPTLTRADRLVGQVLGLKG LPDVF E+
Sbjct:   55 GKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKGGPLASEDEKESTEGEGGDEGVQRQQGGFYTSRGSSHPDTFTDEKTGITYHLRRHVSFVDCPGHDILMATMLNGAAVMDAALLLVAGNETCPQPQTSEHLAAVEIMRLENIIILQNKVDLVKPDAALAQHEQIRKFVAGTVADSAPVIPISAVLKHNIDVVCEYLVHRIPVPMRDFTSVPRLIVIRSFDVNKPGQDVQDLQGGVAGGSILQGVLRVGDEIEVRPGIVDRSPDGDGTSMVCSPIFSRVSSLYAESNDLQFAVPGGLIGVGTRIDPTLTRADRLVGQVLGLKGQLPDVFAEM 392
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10035.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMY1_ECTSI2.580e-22599.69Protein-synthesizing GTPase n=2 Tax=Ectocarpus Tax... [more]
A0A835YYS7_9STRA5.020e-17882.02Protein-synthesizing GTPase n=2 Tax=Tribonema minu... [more]
A0A6S9GDD6_HETAK1.440e-17280.38Protein-synthesizing GTPase n=1 Tax=Heterosigma ak... [more]
A0A7S2XYP2_9STRA1.530e-17079.87Protein-synthesizing GTPase (Fragment) n=1 Tax=Fib... [more]
A0A6U4HRZ6_9STRA1.510e-16576.58Protein-synthesizing GTPase n=4 Tax=Phaeomonas par... [more]
W7U2Z3_9STRA3.480e-16577.53Protein-synthesizing GTPase n=2 Tax=Monodopsidacea... [more]
K3WE95_GLOUD1.690e-16377.12Protein-synthesizing GTPase n=29 Tax=Oomycota TaxI... [more]
F0Y3F3_AURAN1.740e-16276.10Protein-synthesizing GTPase n=1 Tax=Aureococcus an... [more]
A0A7S4A8Q2_9STRA5.190e-16277.92Protein-synthesizing GTPase n=1 Tax=Pelagomonas ca... [more]
A0A7S2MPR4_9STRA7.140e-16273.67Protein-synthesizing GTPase n=3 Tax=Lithodesmiacea... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10035contigEcto-sp13_S_contig10035:141..5222 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score112.5
Seed ortholog evalue8.3e-23
Seed eggNOG ortholog2880.D8LMY1
Preferred nameeIF-2gamma
Model size1005
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K03242,ko:K04257,ko:K11419
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,ko03013,ko04740,map00310,map03013,map04740
Hectar predicted targeting categoryother localisation
GOsGO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005850,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016282,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043614,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070993,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons7
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG3276@1,KOG0466@2759
EC2.1.1.43
Cds size213
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03012,ko03036,ko04030
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10035.56.1prot_Ecto-sp13_S_contig10035.56.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10035 3661..5222 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462502.0555348-UTR-Ecto-sp13_S_contig10035:140..3231681462502.0555348-UTR-Ecto-sp13_S_contig10035:140..323Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10035 141..323 -
1681462502.0680563-UTR-Ecto-sp13_S_contig10035:1020..11211681462502.0680563-UTR-Ecto-sp13_S_contig10035:1020..1121Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10035 1021..1121 -
1681462502.0772135-UTR-Ecto-sp13_S_contig10035:1688..19441681462502.0772135-UTR-Ecto-sp13_S_contig10035:1688..1944Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10035 1689..1944 -
1681462502.087149-UTR-Ecto-sp13_S_contig10035:2900..30231681462502.087149-UTR-Ecto-sp13_S_contig10035:2900..3023Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10035 2901..3023 -
1681462502.098022-UTR-Ecto-sp13_S_contig10035:3531..36601681462502.098022-UTR-Ecto-sp13_S_contig10035:3531..3660Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10035 3532..3660 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462502.1065912-CDS-Ecto-sp13_S_contig10035:3660..36611681462502.1065912-CDS-Ecto-sp13_S_contig10035:3660..3661Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10035 3661..3661 -
1681462502.1156647-CDS-Ecto-sp13_S_contig10035:3978..40941681462502.1156647-CDS-Ecto-sp13_S_contig10035:3978..4094Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10035 3979..4094 -
1681462502.1285627-CDS-Ecto-sp13_S_contig10035:5126..52221681462502.1285627-CDS-Ecto-sp13_S_contig10035:5126..5222Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10035 5127..5222 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10035.56.1

>prot_Ecto-sp13_S_contig10035.56.1 ID=prot_Ecto-sp13_S_contig10035.56.1|Name=mRNA_Ecto-sp13_S_contig10035.56.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=71bp
QAPAAAPAPTPAPAPESRRGRHDVKQEHLAVQTVRFKNELERNITIKLGY
ANAKIFKAVEGAVPGPGNFR*
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mRNA from alignment at Ecto-sp13_S_contig10035:141..5222-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10035.56.1 ID=mRNA_Ecto-sp13_S_contig10035.56.1|Name=mRNA_Ecto-sp13_S_contig10035.56.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5082bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10035:141..5222- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCGCCGGCCGCCGCCCCCGCTCCCACTCCCGCTCCCGCTCCAGAGTC
TCGCAGGGGTCGCCACGATGTAAAGCAGGAGCACCTCGCTGTTCAGGTAC
GCGACCCGATAAAAAGACAGAACTCAAGAAGGGATAATTTACCATTCACA
AGTAGCCTCCCCTCGGTACACCTCTTCTCTTTTTTTTATGGCTGCATTAT
TTGTGCATGTGTGGGAGGTGATGCACTGAGGTTGCAAGCGAGCGCGCGCG
CGCCCCCCATGATGACGGAATCACAGCTCCCGGGAACCAAAGCTTCCGAG
TGGTAAACGGGCGGGCGTACGGTAGCTGATCCGGTGCGTCACTTGCTGGA
GGTGGGGCACCGAGGTTACGCGCGAGCGCAAACCATGATGACGGAGCGAA
AAGCTTTCGGGCGGTGAAAGGGGGCGCATACGGTCTCCGGTATCGTAGCT
GATACAACACAGCGGAGCAGGTGTCTTGCCCGCTTCCGTGTCTTTGCCCG
GGGATACAAGGAGGCGTTTTTTTTTGGGGGGGGGGTGTCATCCGTGCTCC
GCATCCGTTGGTTTGGTTTACACCCCGCTCGGTGCAAGACGGTGTGTTTT
GACTTCAATGCCTGGCTTGCCCCGTACATGTGAACATATTTCCAAGGGGA
GCGCACAAGCAGTACCACCACGCCACGGCCGTGTTAAGTTTTCTTTTCTT
TTTCTTCTCTCTCCTCATTGCTTTTTCGGCCCTCCGTCTAGCTTCACCCC
CCCCCCCCCCCTCTTTGTGACGATCTTTCATCCCTCCCCGCCACCCCCAC
TCGGTAGGATTTGGAAACTCTAGACCCGGCCGCTCTAACTCCGTTGACGC
CGGAGGTCATCAGCCGCCAAGCGACCATCAACATCGGTACCATCGGACAC
GTGGCACACGGCAAGTCTACCGTGGTGAAGGCAATCTCGGGAGTTCAGGT
GGGTTTTCTCGCAGTGTAGGCGTTTTGCAGCCCCCCCCCGCCCCCTCCGC
GGCTCTTGATGTCGCTGACGCCACCCTTTTGGTGTTTGACGTTGCTTGTT
GTGTTGTTTGTTTGATGTTTTCACCGCTGCTGCTTTGCTCGTGCTTTAAA
TGTTGCCCTTGCTGACGTGATGCGGCAGACTGTTCGCTTTAAGAATGAGC
TGGAGCGTAACATCACCATCAAGCTGGGGTACGCGAACGCCAAGATCTTC
AAGGCTGTCGAGGGAGCCGTGCCGGGGCCAGGAAACTTCAGGTAGTCTAC
ACCTGTTTGTTTTCTCCGGGATGTTCACAGACATAAATGAAGCAGCGGCA
GCAGCAGGCGGGCCCGCGGCTGAAGTAGACAAATCCTCTTGTTCACGGCT
AGAGCCACCACTGCTACTGCTGCTGCCGTGTCCGTGTGTACACTCGTGTA
CAAGACAAATCAAGGGTCGTATGCATCTAGGGCGCGGTGGGGGGGCGCCG
CAGCGTGCCGCCTCTGGGCGTACCCTAGCCAACGCATCATGTCTCACCGT
GGAACCGCCCATTTTGTGACTACGTTTGATACCGTACGCGATCGCCCTCT
CTTGTCGATAGGTCGAAGGGGAGCCACCACGGTGACAGGTTTGAGGAGGA
CGGGAAGACGTGGGAGCTTCAGAGACACGTCTCCTTTGTGGACTGCCCGG
GGCACGACATCCTGATGGCCACGATGCTTAACGGCGCGGCGGTAAGCGAG
AGACGCAATCTTCTGCTCCTGCTGCTGCCGCGTCTCTTTGCTCTATTTAG
CTAGCCAAACACCCCACACCTGTCTTGAGACACTCCCAGAAGCAGCTTTT
CGAGCGATCGTTGAGATACGTCGAACATGCCGGGGAACCTTTTTTCTGTT
GGTGCACACACAGTTGAAACATGATACCCTGGTGCGGTGTTTGCGACGTA
CCAACATGCCGCCGTGTTTGTCCTGAGTCTTCTTGGTGCTGTGCGCTTGT
GTTGGCCTGGTGCTCCAGTTGCTCGGGCGGTAGTAGCGTCGCGTCTCTGA
CGCCATGTTTGTGCTATTCTCCTGTACTTGCGTGTGTTCGCGGTTGACGT
TGCGGTCACTCTGCTCCCTGTCTCTTCTCCGCCGTACGTGCTCTCAACCC
CTGGCTCGCTGATGGCGAAAATAACGAACCCGAACGAACACGCCCCGAGA
CTGCGTTTACGTTACGACCCACCGCCTCCCTTGGAAACTCGCCCATCAGG
TGATGGACGCTGCGTTGCTGCTGGTGGCGGGGAATGAGACTTGTCCGCAG
CCGCAGACTAGCGAGCACCTTGCCGCGGTAGAGATCATGCGGCTCCAAAA
CATCATCATCCTTCAAAACAAGGTGCGTCTGTGTGTGCATGCGTCGTTGT
TGTTAGCGTCGACCGCGCCAATCGGCTGTCCAATGAAAATACGTCAGTCT
CAGTGCGGTTGAAAACACGAAATGTGTGTGTGTGTGGGAGATTTTGTTGG
AGATGTCATGGGTCTGCTCATTCTTGTCAAGATTGCCGCTAAGCTTTTAC
CCACGCAACTACGGTATGAAGGCGGAATCAATGATAGTGATGATGTGTTT
CGCATGTGGAAAGAGCGAATGCTGGAGGAGTATAATCCGTTCACCGTAAG
CAAATGTTGACATGCTGACTCTTTTTAACTTGAAAAAGAACATTAAACCA
GAGAGAGAGGGTTGGCAGTCTGCGGCGACCGGTTGTACGTGAAACGTTTG
TTGAGGAAGCTCCTCATGCGCGACCAGCAGATGTGGTAAAAGAGTACGAA
CAGAGAAACGACTAAAGATTAGAGGCACCCTCGGAGAGATCATCCCGGCA
TCTCTCTGTCCCCCCTCTTTGCCGGTACAAGCCTTTGCTTTTCTGGAAGC
AAGACGAAAGTGTGGGCGCACCACCAAACAGAAAAATTGCACGAGGGGAA
CGCTTTCGATCTCCCGCCGGCTAAACGCTGAGGACGGGGTCGACGTCGTG
TGTTTATGCGTATCCTGTTTTTATTTTATTTTTAATTTTTTACCACGTCT
ATCTCGCTCGTTTTCCTCACCGCACCCGTTTGTTTCGCTCCGAGGTAATT
ACAAGAGCACGCAAGCAAGGCTAGATAGCTCACAACGAAATTGTATGACC
ACATATTGGCGTAGCAAGCAGAGGTATTTAGCCACCAAACGTACACAAAA
ACATCAAAACACACGTTGGACCTAGGCAAGCATAGCTAGCCACCCCCACG
ACTGCACGTGAAACCGAACACACACGCACTTAGCGTCTATAGCGTGCGAC
GATTCTGTGTGCGTGTATGCTTTCGCAGGTGGACCTGGTGAAGCACGACC
AGGCGATGCTGCAGCACGAGCAGATCCGCAAGTTCGTCGCCGGCACGGTG
GCGGACGACGCTCCCGTCATCCCCATTAGCGCGGTCCTCAAGTACAACAT
CGACGTGGTGTGCGAGTACATCAACTGCAAGATTCCCATCCCGGTGCGGG
ACTTCACGAGCGTGCCGCGGCTAATCATAATCAGATCCTTCGACGTGAAC
AAGCCCGGCGAGGAGGTGGAGCACCTCAGAGGAGGTGTGTACAACATGCG
TGTATGTTTGTGTGCGTTTGTTTTTTTTCGCATCGACCGGGCTAACTAAC
TGGCTGGCCAACGAAGAAGTCAGTCTGTACGTGTGTGTGTGTCCTTAAGA
GTACTTCGTACCGACCGCGCTAACCGGCTGGCCAAGGAACAGACGTCAGT
CTCAGTGCGGCTAAATACAGAGAGCGTGTGTGCGTGTGTCTTCGTTTGGC
ACCGACCCCACTTAATCGGCTGACCAATCAAATGACGTCATGTCTTGCGG
ATCGGGGCAGAAAACGCAAACACGCCTCCAACGAGTTTGTGTGTGTTAAT
GCTTGTTTCAATTGGTGCTTGACTTTCTTCTGATAGGCTCAATCCCAATT
GAATGCCACATTGTTGACGCACTGCCGCCTATTCGGTTATTTGTATTCCC
ATGACGTCCAAAATGAATGGGATGACAATATTTACAAACGTTGTCGATCT
GGATGTTTGATGGATTCTCGTCGTCGTCCTTCCGTGATTTTGCTACCGTA
TTTTCTACGGTACGGTATATACCCCTTGCCCTTGCTTCTTGTGTGTGTCA
GGTGTTGCGGGTGGTTCGATCGTTCAGGGCGTGCTGCGGGTAGGGGATGA
GATCGAGGTCCGCCCGGGCATCGTCACCAAAGACCCCGAGGGGAACGTTA
GGGTACGTGTTGCGCCACAGGACTACTTGCTGTCCTTTCATGAGTAGTGT
CGGTATTGATTCGGCCGTCAATGTCGTTGTCGCTGTTGTTGTTAGCTCGA
CAGAAGCAGTTGTTGTTGTGGTCGTCTTGACACATGAACAACTTGTTCCT
GCTGTTGCTCTTGTTGCTATTTGGCGTACCAAAAATGTAGAAACATTTTG
TTGTTGGTTGTTGTTGTTGTTGTCTTCACGTACATGCGGAGAGTTCTCAT
GATGCCCCGCCATCTAGTAATTTTGTTGTTTTCCTTGTCTTCACATCGAT
GTAGATGGAATTATCGTGATCCCCCGCTATTGAGTAGTTTCCCTTTGAAA
TCGCGACCCCCGAGCCCAAGGGCTAGTAGAAATGAGGGGCCCGAGGAAAT
CGCTTGCGCCGGCAGTAGCTGTCGGCCAAAAAGGATTGTAGAGGTCCCAG
TCACCCCCCATGCTTGTGTCCGTTGTTTTACTCCTAGCGGTAAGGTAAGC
GCATCGCGTGCCACATGAAGGCGCGCGCTACCTCCCACAGCACCCTCAGG
CATCCGCGTGTGTTTTTGTATTTGTTTTCGTCTTTCCTGATTCAATCTAT
GCATTTCTTTCCGACCTCCCCGTGCGCTCGATGCACGTGTTTGTGATGTA
TAAACACACTTGCGACCAACAACAACAACAACAACAACGGCGCCCACAGT
GCGAGCCGATCTTCTCGAAGATCTTGTCGCTGTACGCGGAGCAGAACGAC
CTCAAGTTCGCGGTGCCCGGCGGGCTAATCGGAGTGGGGACCAGGGTGGA
CCCGACGCTCACACGGGCGGACCGGCTGGTGGGGCAGGTGCTCGGGCTTA
AGGGTAACCTACCGGACGTGTTTACGGAGGTA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10035:141..5222-

>mRNA_Ecto-sp13_S_contig10035.56.1 ID=mRNA_Ecto-sp13_S_contig10035.56.1|Name=mRNA_Ecto-sp13_S_contig10035.56.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=213bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10035:141..5222- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGGCGCCGGCCGCCGCCCCCGCTCCCACTCCCGCTCCCGCTCCAGAGTC
TCGCAGGGGTCGCCACGATGTAAAGCAGGAGCACCTCGCTGTTCAGACTG
TTCGCTTTAAGAATGAGCTGGAGCGTAACATCACCATCAAGCTGGGGTAC
GCGAACGCCAAGATCTTCAAGGCTGTCGAGGGAGCCGTGCCGGGGCCAGG
AAACTTCAGGTAG
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