prot_Ecto-sp13_S_contig18055.5545.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18055.5545.1
Unique Nameprot_Ecto-sp13_S_contig18055.5545.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length38
Homology
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Match: A0A6H5L5U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5U1_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 1.470e-13
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0
Query:    1 RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIK 34
            RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIK
Sbjct:  366 RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIK 399          
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Match: A0A7S2EHV9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EHV9_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 1.550e-8
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIK 34
            R+TLLLLDRADD LSPLMHEFTYQ +V DLL IK
Sbjct:  166 RSTLLLLDRADDCLSPLMHEFTYQAMVNDLLPIK 199          
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Match: A0A835YPU4_9STRA (Sec1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPU4_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.890e-8
Identity = 23/33 (69.70%), Postives = 32/33 (96.97%), Query Frame = 0
Query:    1 RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGI 33
            R+TLL++DRADDPL+PLMH+FTYQCLV+++L +
Sbjct:  248 RSTLLVMDRADDPLTPLMHDFTYQCLVQEVLPV 280          
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Match: A0A7R9WX81_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WX81_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.820e-8
Identity = 24/34 (70.59%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    1 RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIK 34
            R+TLLLLDR+DD L+PLMH+FTYQ +V DLLG++
Sbjct:   32 RSTLLLLDRSDDCLTPLMHDFTYQAMVNDLLGME 65          
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Match: A0A7S2R8E9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R8E9_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 7.290e-8
Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIK 34
            RATLLLLDR DD LSPLMHEFTYQ +V DLL ++
Sbjct:   91 RATLLLLDRTDDCLSPLMHEFTYQAMVNDLLTVE 124          
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Match: A0A7S1D716_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D716_CYCTE)

HSP 1 Score: 53.9 bits (128), Expect = 2.590e-7
Identity = 27/40 (67.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGI---KVTI 37
            RATLL+LDR DD LSPLMH+FTYQ +V DLL I   K+T+
Sbjct:  180 RATLLILDRKDDCLSPLMHDFTYQAMVNDLLSIDDEKITL 219          
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Match: A0A367J3S0_RHIAZ (Vacuolar sorting protein VPS33/slp1 (Fragment) n=2 Tax=Rhizopus TaxID=4842 RepID=A0A367J3S0_RHIAZ)

HSP 1 Score: 53.9 bits (128), Expect = 2.590e-7
Identity = 23/38 (60.53%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIKVTIN 38
            RATLL+LDR+ DP++PL+HEFTYQ ++ DLL ++ T N
Sbjct:  128 RATLLILDRSIDPVAPLLHEFTYQAMINDLLPVQETDN 165          
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Match: A0A1X0S8I2_RHIZD (Sec1-like protein n=2 Tax=Rhizopus microsporus TaxID=58291 RepID=A0A1X0S8I2_RHIZD)

HSP 1 Score: 53.9 bits (128), Expect = 2.590e-7
Identity = 23/38 (60.53%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIKVTIN 38
            RATLL+LDR+ DP++PL+HEFTYQ ++ DLL ++ T N
Sbjct:   82 RATLLILDRSIDPVAPLLHEFTYQAMINDLLPVQETDN 119          
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Match: A0A7S3NJ37_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ37_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.530e-7
Identity = 23/33 (69.70%), Postives = 30/33 (90.91%), Query Frame = 0
Query:    2 ATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIK 34
            AT+L+LDRADDPL+PL+HE+TYQ LV D+L I+
Sbjct:  267 ATVLILDRADDPLTPLLHEYTYQALVHDMLTIQ 299          
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Match: A0A7R9WGS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGS9_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.550e-7
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIK 34
            R+TLLL+DR+DD LSPLMHEFTYQ +V DLL I+
Sbjct:  243 RSTLLLVDRSDDCLSPLMHEFTYQAMVNDLLPIE 276          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18055.5545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U1_9PHAE1.470e-13100.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2EHV9_9STRA1.550e-882.35Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A835YPU4_9STRA2.890e-869.70Sec1-like protein n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7R9WX81_9STRA4.820e-870.59Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
A0A7S2R8E9_9STRA7.290e-876.47Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S1D716_CYCTE2.590e-767.50Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A367J3S0_RHIAZ2.590e-760.53Vacuolar sorting protein VPS33/slp1 (Fragment) n=2... [more]
A0A1X0S8I2_RHIZD2.590e-760.53Sec1-like protein n=2 Tax=Rhizopus microsporus Tax... [more]
A0A7S3NJ37_9STRA3.530e-769.70Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7R9WGS9_9STRA3.550e-773.53Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.830.10coord: 20..34
e-value: 1.4E-12
score: 49.4
IPR027482Sec1-like, domain 2GENE3D3.40.50.1910coord: 1..19
e-value: 1.4E-12
score: 49.4
IPR001619Sec1-like proteinPFAMPF00995Sec1coord: 1..33
e-value: 2.7E-12
score: 46.7
IPR036045Sec1-like superfamilySUPERFAMILY56815Sec1/munc18-like (SM) proteinscoord: 2..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18055contigEcto-sp13_S_contig18055:64..177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18055.5545.1mRNA_Ecto-sp13_S_contig18055.5545.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18055 64..177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18055.5545.1 ID=prot_Ecto-sp13_S_contig18055.5545.1|Name=mRNA_Ecto-sp13_S_contig18055.5545.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=38bp
RATLLLLDRADDPLSPLMHEFTYQCLVEDLLGIKVTIN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027482Sec-1-like_dom2
IPR001619Sec1-like
IPR036045Sec1-like_sf