prot_Ecto-sp13_S_contig18028.5530.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18028.5530.1
Unique Nameprot_Ecto-sp13_S_contig18028.5530.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length169
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18028.5530.1 vs. uniprot
Match: A0A8J2SW32_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW32_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.680e-11
Identity = 42/115 (36.52%), Postives = 62/115 (53.91%), Query Frame = 0 
Query:   56 ALLALWVSGSYAIDSDSGP-FPWLFVKRRVLRANLNGAGLRKDLHAIRKWVTDHHTLSKEAILHWWVRDLPDGKDGQAAACSRVSGSQEIEDMFRQKFSKRTYAVEPILFMNEVF 169
            ALL  W  G+ +IDSDS P  P+L  K R+L+         +DL A R W       + +   HWW+ DL    +    A  R++  + ++D+FR KFSK  YA+EP+  MNE++
Sbjct:  188 ALLVAW--GNLSIDSDSLPGLPFLPAKSRLLQGKFTSPEDVRDLKACRTWCVQKGP-NHDMTSHWWMSDLD---EPTLKAFERLATGKVVDDLFRTKFSKAGYALEPVRGMNELY 296
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18028.5530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J2SW32_9STRA4.680e-1136.52Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18028contigEcto-sp13_S_contig18028:1292..3560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18028.5530.1mRNA_Ecto-sp13_S_contig18028.5530.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18028 1158..3560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18028.5530.1 ID=prot_Ecto-sp13_S_contig18028.5530.1|Name=mRNA_Ecto-sp13_S_contig18028.5530.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=169bp
METANSWIADLANALTEALSSPSTAALSTFFKDNEGLSPPPPTWLLALRE
NAWVLALLALWVSGSYAIDSDSGPFPWLFVKRRVLRANLNGAGLRKDLHA
IRKWVTDHHTLSKEAILHWWVRDLPDGKDGQAAACSRVSGSQEIEDMFRQ
KFSKRTYAVEPILFMNEVF
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