mRNA_Ecto-sp13_S_contig18018.5526.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig18018.5526.1
Unique NamemRNA_Ecto-sp13_S_contig18018.5526.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Match: D7G030_ECTSI (EXS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G030_ECTSI)

HSP 1 Score: 521 bits (1342), Expect = 5.510e-185
Identity = 255/261 (97.70%), Postives = 255/261 (97.70%), Query Frame = 1
Query:    1 PPVGPERRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPCVFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLPVVGKAIIAAALLNSVYSFAWDVKMDWGLGQRGSRRWGLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLAEERFRSVDMVLTLELVEILRRSMWNVFRLEWECIQCLGGAKAVRLDKGSDALRV 783
            P   P  RQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPCVFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLP VGKAIIAAALLNSVYSFAWDVKMDWGLGQRGSRRWGLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLAEERFRSVDMVLTLELVEILRRSMWNVFRLEWECIQCLGGAKAVRLDKGSDALRV
Sbjct:  123 PLQAPSVRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPCVFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLPGVGKAIIAAALLNSVYSFAWDVKMDWGLGQRGSRRWGLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLAEERFRSVDMVLTLELVEILRRSMWNVFRLEWECIQCLGGAKAVRLDKGSDALRV 383          
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Match: A0A835YVP0_9STRA (EXS family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP0_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.250e-47
Identity = 104/247 (42.11%), Postives = 134/247 (54.25%), Query Frame = 1
Query:    4 PVGPERRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAF--LYTPCVFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRH--YDGAAYLPVVGKAIIAAALLNSVYSFAWDVKMDWGLGQRGSRRWGLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLAEERFRSV--DMVLTLELVEILRRSMWNVFRLEWECIQ 726
            P+    R       +++  V  P++DV F EVLVADAL SLSRVF+D  +  L++A  W    P      ++     A  P  +RVRQC +    E DP R+ L A+N+GKYLS  P + L    A+     DG      +  A  AAA  N+ Y  AWDV+MDWGLG  G++  GLR TLL+   AP  YY A+A D  LR  WV  LA   +     D+ L LELVE+ RR MW V RLEWE +Q
Sbjct:  134 PMQSAMRDGLNFLLSTVGRVLCPSSDVPFVEVLVADALCSLSRVFSDAGLAILVLAATWTSSAPPSQVTRVFVTATLACLPAVLRVRQCAILHFAEPDPARRRLHALNIGKYLSTLPPVLLGALHALAPPALDGVP----LATAAAAAAAFNTAYCLAWDVRMDWGLGDLGAKAAGLRPTLLLGAHAP--YYAAIAADAALRCAWVRPLAALGYALALTDLTLVLELVEVCRRCMWAVLRLEWEAVQ 374          
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Match: W7TLW9_9STRA (Protein-er retention protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLW9_9STRA)

HSP 1 Score: 161 bits (408), Expect = 6.150e-43
Identity = 99/261 (37.93%), Postives = 143/261 (54.79%), Query Frame = 1
Query:   22 RQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPCVF----ASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLPVVGKAIIAAALLNSVYSFAWDVKMDWGLG--------QRGS------RRWGLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLA--EERFRSVDMVLTLELVEILRRSMWNVFRLEWECIQCLGGAK 744
            R+   LF   L  V  P T++HF EVLV D LTSLS+VF +V +T +          PG   + +P +F    AS P+ +R+RQCV+Q       K + L+++N+ KY S+ P +WL    A  HY        + + ++   L+NS+YSF WDV MDWGLG        ++G       R WGLR TLL    +   YY A+ +DLVLRL WV +    + R      +L +E +E+LRR +W+++R+EWEC+   GG K
Sbjct:  168 RELALLFGRVLWLVVLPGTEIHFLEVLVGDILTSLSKVFFEVGLTCVATLLSLS---PGLFRIVSPDIFPTLLASTPFILRIRQCVVQRRGTASGKARFLVSLNILKYCSSIPGLWLPLLLA-PHYSTYQ----IERVLLVVLLVNSLYSFLWDVIMDWGLGHVKLTGAPKKGGGGAVRLRHWGLRPTLLF--GSAGSYYAAIGLDLVLRLVWVLKYVNFDHRLSYDKFMLLIECLEVLRRGIWSIYRIEWECLSINGGRK 418          
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Match: A0A0L0FR54_9EUKA (EXS domain-containing protein (Fragment) n=2 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FR54_9EUKA)

HSP 1 Score: 138 bits (347), Expect = 4.300e-35
Identity = 88/228 (38.60%), Postives = 133/228 (58.33%), Query Frame = 1
Query:   67 FPATDVHFAEVLVADALTSLSRVFADVAVTFLLVA---KGWGM--RYPG-WAFLYTPCVFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLPVVGKAIIAAALLNSVYSFAWDVKMDWGLGQRGSRRWGLRNTLLICHEAPWP-YYVAVAVDLVLRLTWVARLAEE-RFRSVDMVLTLELVEILRRSMWNVFRLEWECIQ 726
            FP   + FAEV +AD LTSLS+VFAD    F  V      W +    PG  + L+ P V  S PY +R+RQC+++  Y     +K L  +N  KY SA+P IWL G+       G +  P +  A I A+++N++Y++ WD+  DWGL  R S  + LR  +++    P P YY+ + +DL+LR  W  +L+   R  S D ++  EL+EI+RR++WN+ R+E+ECI+
Sbjct:   98 FPGARISFAEVFIADGLTSLSKVFADFEQIFCFVGYHVHQWDVYDASPGCMSSLFLPIV-VSIPYTIRLRQCLIE--YRAAGVQKDL--VNAFKYASAYPPIWL-GHALKMAPTGQS--PTLYSAWILASVVNTMYTYYWDLVWDWGLFDRTSPNYPLRARMML----PRPLYYMWILIDLILRCVWSVQLSNLLRLNSADKIILFELLEIIRRALWNIVRVEYECIK 313          
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Match: A9V3X3_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V3X3_MONBE)

HSP 1 Score: 127 bits (318), Expect = 1.950e-29
Identity = 84/250 (33.60%), Postives = 127/250 (50.80%), Query Frame = 1
Query:   40 FFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPC-------VFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLPVVGKAIIA-----------AALLNSVYSFAWDVKMDWGLGQRGSRRWGLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLA---EERFRSVDMVLTLELVEILRRSMWNVFRLEWECIQ 726
            FF      FF  + VHF +VL ADALTS+S++ AD+ +        +       A     C       + AS PY +R  QC  +   +      L   IN+GKYLS+FPVIW +   A++H       P+ G  + A              +N++YSF WD+ MDWGL +  + R+ L    L+ +++P PYY+A+ +DL LRL W  +L+   ++       V   E++E+ RR +WN FR+EW+ IQ
Sbjct:  123 FFWDRLRTFFTFSKVHFVDVLTADALTSMSKLLADLQIVVCAHVAVFTFD----AGNSEQCMHSSVGPILASLPYAIRAIQCY-RAYLDTGSTHNL---INLGKYLSSFPVIWTS---ALKHQ----LAPLEGAKLDAHDQHLQILWLYCVTINTLYSFLWDILMDWGLARDANARFPLLRNHLV-YQSPLPYYLAMVLDLCLRLCWSLKLSSHLQQHASGQAFVFAFEVLEVFRRFVWNFFRVEWQYIQ 356          
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Match: A0A1V9YPV6_9STRA (Inositol monophosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPV6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.330e-29
Identity = 82/235 (34.89%), Postives = 124/235 (52.77%), Query Frame = 1
Query:   70 PATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYT--------PCVFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGA--AYLPVVGKAI-IAAALLNSVYSFAWDVKMDWGLGQRGSRRWGLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLAEERFRSVDMV-----LTLELVEILRRSMWNVFRLEWECIQ 726
            P T+  F EV +AD LTS+S+VF D+AV  L++ +    R      +YT        P + A+ PY +R  QC++          K L  +N  KY +   VI++    A+     A  ++  + G+ + + AA  NS+YS  WDV MDWGLGQ  +    LR+ LL  +  P  YYVA+ +D  LR+ W    A   +  VD+V     + +E+ E+LRR MWN  R+EW+C++
Sbjct:  135 PLTETPFVEVFLADGLTSMSKVFHDIAVGVLMLMESIDGRE---TIMYTSKMKRHPMPYLCAAMPYLIRATQCLISYKRAPLANDKFLHLLNTFKYGTGLCVIFVGALPAVLGASPATTSFFVLDGQTMFLLAACCNSLYSLFWDVVMDWGLGQPEAEARYLRHPLL--YRRPVVYYVAIGLDCGLRILW----ATSNWAWVDIVGAEFKVVMEVAEVLRRCMWNCLRVEWQCVK 360          
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Match: A0A7S1IAN5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IAN5_9EUGL)

HSP 1 Score: 122 bits (305), Expect = 1.510e-28
Identity = 89/267 (33.33%), Postives = 131/267 (49.06%), Query Frame = 1
Query:    4 PVGPERRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPC-------VFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLPVVGKAIIAAALLNSVYSFAWDVKMDWGLGQRGSRRWGLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLAEERF------RSVDMVLTLELVEILRRSMWNVFRLEWECIQCLGGAKAVRLDKG 765
            P  P      AL     + +  P T V F  V++AD LTS S+VFAD+  T  +++      +   A +   C       + AS P W+R+ QC+    Y  D +R+ LL  N  KY +AFPV++ +  +  +     A+ P + +  + +  +NS+YSF WD+  DWGLG   S    LR+ L+      W YY  +  DL+LR TW  +L+   +      R   M + LE VEI RR MW  FR EW+ I     +  +R DKG
Sbjct:  166 PKSPFHNARYALLQALQSVMLSPFTGVAFVHVILADLLTSYSKVFADMYGTVCVISNSTDRHFH--ASILQACRNDPIGPIVASLPSWLRLFQCLK--AYSTDGERRHLL--NALKYSTAFPVLFFSYLK--QGPSAEAWGPQLSQLWLLSVFVNSLYSFYWDIYYDWGLGSISSSNLLLRDRLVFPKR--WWYYATMVTDLLLRFTWSLQLSPHWWFIGSVGREFKMFV-LEAVEIFRRCMWIFFRCEWQHI-----SHPIREDKG 416          
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Match: A0A7S1MLS0_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MLS0_ALECA)

HSP 1 Score: 118 bits (296), Expect = 2.180e-28
Identity = 86/269 (31.97%), Postives = 130/269 (48.33%), Query Frame = 1
Query:   34 ALFFTSLAGVFFP--ATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPG-WAFLY--------------------TPCVFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAM----RHYDGAAYLPVVGKAIIAAALLNSVYSFAWDVKMDWGLGQRG---SRRWGLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLAEERFRSVDMVL--TLELVEILRRSMWNVFRLEWECIQCLGGAK 744
            A F  +L   F+P  A +  F +VLVAD LTSL+R F D+A+      +  G   PG WA                        P V  + P+ VR RQC +   +  +   + L  +N+ KYLSA P++ L   +A        +G  +L ++      A ++N+V+S+ WD+ MDWGL       S R+GLR  LL+C    + YY+A+A D + R  W  R   E  R     L    + VE+ RR +W+  R+EW+C++  GG +
Sbjct:   13 AAFARALRRCFWPDAAKETPFVQVLVADGLTSLARAFFDIALGSCAALQAAGG--PGAWALTRGAGERPTLLGDALEQCGRSPLPYVAWAAPFLVRARQCWLSSRHAPEALSRQLHLLNLAKYLSALPIVCLAFLRAQASEGEDIEGLEFLGLL------AGVVNTVFSYLWDLAMDWGLLHPAPPLSGRFGLRPVLLLCEGGGF-YYLAIAADALARACWSLRWCPEAVRLGGFWLGSLQQAVEVARRCLWSALRVEWQCVRTGGGPR 272          
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Match: I4YAW1_WALMC (EXS-domain-containing protein n=1 Tax=Wallemia mellicola (strain ATCC MYA-4683 / CBS 633.66) TaxID=671144 RepID=I4YAW1_WALMC)

HSP 1 Score: 119 bits (299), Expect = 2.980e-28
Identity = 80/248 (32.26%), Postives = 125/248 (50.40%), Query Frame = 1
Query:   40 FFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYTPC-------VFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLPVVGKAIIAAALLNSVYSFAWDVKMDWGLGQRGSRRW---------GLRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLAEERFRSVDM---VLTLELVEILRRSMWNVFRLEWECIQ 726
            F  +L  + +    V F +VL+AD LTS ++VF D   + +          P   F  TP        VF + PY +R +QC+++       ++K LL  N  KY S+FPVI    + A+  Y+  AY        + + ++NS++SF WDV+ DWGL    S  W          LR+  L  ++  + YY+A+ +D +LR TW  +L+      V++   V  LE++EI RR +W  FRLEW+ I+
Sbjct:   96 FIGTLGEIVYSPFQVTFNQVLLADILTSYAKVFGDFYTSLVQCLD------PESNFAITPPSANYMAPVFTAIPYILRFKQCIVEYVASNFTQKKSLL--NALKYASSFPVI---AFSALHRYNNTAY-----NWWLISVIVNSLFSFWWDVRNDWGLNFLDSDVWLRNGSTPKTSLRDVQL--YKESYKYYIAIFIDFILRFTWSLKLSSHLHTYVELESGVFALEILEIFRRYLWCFFRLEWQVIK 325          
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Match: A0A484DW73_BRELC (EXS domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DW73_BRELC)

HSP 1 Score: 121 bits (303), Expect = 4.270e-28
Identity = 81/229 (35.37%), Postives = 114/229 (49.78%), Query Frame = 1
Query:   70 PATDVHFAEVLVADALTSLSRVFADVAVTFLLVAKGWGMRYPGWAFLYT--------PCVFASFPYWVRVRQCVMQLTYEVDPKRKLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLPVVGKAIIAAALLNSVYSFAWDVKMDWGLGQ-RGSRRWG-LRNTLLICHEAPWPYYVAVAVDLVLRLTWVARLAEERFRSVDMVLTLELVEILRRSMWNVFRLEWECIQ 726
            P     FAEV +AD LTSLS+   D+ V  LL++  +          Y         P   AS PY +R  QC++          + L  +N  KY S+  VI +  Y  +R   G A  P      +  A+ NS+YSF WDV MDWGLGQ R  R++  LR+ L         YY+ +A+D VLR+ WV +  +   R V   L  ++ E+LRR +WN  R+EW+CI+
Sbjct:  143 PLHATPFAEVFMADGLTSLSKFIQDLFVALLLLSMSFNTEPKHLRESYISKLKESPLPYFAASMPYIIRATQCLISFQQTKSVNDRFLHLLNTMKYCSSLLVISVGAYPMLR---GLAR-PEQSSFFLLCAVFNSMYSFLWDVVMDWGLGQPRLPRKFAFLRHQLTFRPRKI--YYIIIAIDFVLRILWVTKWWDWMHRGVHFKLISQVAEVLRRIIWNCVRVEWQCIK 365          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18018.5526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G030_ECTSI5.510e-18597.70EXS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835YVP0_9STRA1.250e-4742.11EXS family-domain-containing protein n=1 Tax=Tribo... [more]
W7TLW9_9STRA6.150e-4337.93Protein-er retention protein n=3 Tax=Monodopsidace... [more]
A0A0L0FR54_9EUKA4.300e-3538.60EXS domain-containing protein (Fragment) n=2 Tax=S... [more]
A9V3X3_MONBE1.950e-2933.60Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A1V9YPV6_9STRA2.330e-2934.89Inositol monophosphatase n=1 Tax=Achlya hypogyna T... [more]
A0A7S1IAN5_9EUGL1.510e-2833.33Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S1MLS0_ALECA2.180e-2831.97Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
I4YAW1_WALMC2.980e-2832.26EXS-domain-containing protein n=1 Tax=Wallemia mel... [more]
A0A484DW73_BRELC4.270e-2835.37EXS domain-containing protein n=1 Tax=Bremia lactu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18018contigEcto-sp13_S_contig18018:505..3474 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score519.6
Seed ortholog evalue8.4e-145
Seed eggNOG ortholog2880.D7G030
Model size786
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.phosphate ion transport
EggNOG OGsCOG5409@1,KOG1162@2759
Cds size786
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462931.4718444-CDS-Ecto-sp13_S_contig18018:504..6181681462931.4718444-CDS-Ecto-sp13_S_contig18018:504..618Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18018 505..618 -
1681462931.4836404-CDS-Ecto-sp13_S_contig18018:1147..14171681462931.4836404-CDS-Ecto-sp13_S_contig18018:1147..1417Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18018 1148..1417 -
1681462931.4951708-CDS-Ecto-sp13_S_contig18018:2306..24631681462931.4951708-CDS-Ecto-sp13_S_contig18018:2306..2463Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18018 2307..2463 -
1681462931.5060992-CDS-Ecto-sp13_S_contig18018:3229..34741681462931.5060992-CDS-Ecto-sp13_S_contig18018:3229..3474Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig18018 3230..3474 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18018.5526.1prot_Ecto-sp13_S_contig18018.5526.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig18018 505..3474 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig18018.5526.1

>prot_Ecto-sp13_S_contig18018.5526.1 ID=prot_Ecto-sp13_S_contig18018.5526.1|Name=mRNA_Ecto-sp13_S_contig18018.5526.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=262bp
PPVGPERRQHTALFFTSLAGVFFPATDVHFAEVLVADALTSLSRVFADVA
VTFLLVAKGWGMRYPGWAFLYTPCVFASFPYWVRVRQCVMQLTYEVDPKR
KLLLAINVGKYLSAFPVIWLTGYQAMRHYDGAAYLPVVGKAIIAAALLNS
VYSFAWDVKMDWGLGQRGSRRWGLRNTLLICHEAPWPYYVAVAVDLVLRL
TWVARLAEERFRSVDMVLTLELVEILRRSMWNVFRLEWECIQCLGGAKAV
RLDKGSDALRV*
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mRNA from alignment at Ecto-sp13_S_contig18018:505..3474-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig18018.5526.1 ID=mRNA_Ecto-sp13_S_contig18018.5526.1|Name=mRNA_Ecto-sp13_S_contig18018.5526.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2970bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18018:505..3474- (Ectocarpus species13 EcNAP12_S_4_19m)
CCCCCGGTCGGCCCGGAACGCAGGCAACACACGGCGCTGTTCTTCACGTC GCTGGCGGGCGTCTTCTTCCCGGCGACGGACGTGCACTTCGCCGAGGTGT TGGTTGCTGACGCGTTGACGAGCCTTTCGAGGGTGTTCGCCGACGTTGCG GTGACCTTCCTGCTCGTGGCCAAGGGCTGGGGGATGAGGTACCCCGGGTG GGCATTCTTGTACACCCCCTGCGTGTTCGCCAGCTTTCCTTACTGGTGAG AAGGACATGGTTTTGCGTAGTACTTACATGCCTGGGTAGCTTGATATGGG TGGGAGTGTTTTTTTCGTGGTGATTTGTCGGGTGGGTCTTGCCGTCCTAT TTTTTTTTCTCGTTTTTGTCTTGTTATTTTTTGAGGGGGGAGGGGGGTAG AGGAGGGAGGGGAGGCGAAGAAGAACTGAGAAATGTGAACCTCCTGTTTT CGCGAAGCCCATTGCGTGCCTCAAGCACCTCGTCATCGTTTCGAATATTT CGTGTGGCGACCACCAGAGGCAAATCTGCTGAAGTTGGATGTGCCGTAAG CCGGCCCGGCCGCCGGCCCAACCGACCCTCAGCCACGCACCCTCCCTCCG CTGAACCCCGGCGCATATGCCGAGCGTACACGCCCTTGCCCCTTGCTTGT GTCGAGTGGGGAATATCGGAAGAGCTGTCTCTTGCCGCCGAGACCTGCCT GTCCGTTATGGAGAGGTGGAGGTGGTGCCTCTTTCAGTAAGAGGCCCCGC AGTTAGAATTTCTCAGCGTGACAAGATATTTTCTGTAGCTGTGGTTGTGT ATCTCAAACGGGTATTGTAGTATTTCTGTATTTGTTTGCACTTTATACAG TAGGTTCCGAAAAACAGTGCATCAGTTAGAAACAATAACGACCACGTTGG CAAACCAACAACAACGGCCGTACCCCCCTGCCGCGCTTCTCTCTCTCGCT CTCTCTCGGCCTGTCGGGACGCCCGCGCTGAACGCTAACGCTCAAAAACA AAAAAAAAAAGGGTCCGTGTGCGGCAGTGCGTGATGCAACTCACTTACGA GGTGGACCCGAAACGGAAGTTGCTATTGGCAATAAACGTCGGCAAGTACC TCAGCGCCTTCCCGGTGATCTGGCTCACCGGGTACCAGGCGATGCGGCAC TACGACGGGGCTGCGTATGTGAGTTAATTGTCGGGTCGTCTTTGTGTTGA TTTTGTTTTTTGTTGTCTTTCCTTTCTGTCCCGTCTTGAAGAAGTTGTTT ACTAGCTGGCATACTTGGGCCGTAAAAACCCAAAAAAATAATAATTTAGA AAAAAAGCGCCCCATTTATATATATATATATTTTACCCCACATTTCCCAT CCCGAAAATCCGACCCCAACCGCCTGTTTTCACGTGTTTTCTCTCGTCAG CGTCGTGGTCGTCGTTGGTTTTTTGGTAGTGGTGGTGGTGTGGTGTTTTT GTCGAATATGAAGACGGTAAGCCCGTTGATTGCCCGTCGTTGTCGGGAGA CCGGAAGCCACCATTAGTTCCCGAGATGCCCGCCTGGTCTCAACGTTACG CTTGCGGCTCAACCGGCTCACCGTATCTCGCGTTGTGGTTGTGTTTTCGT CTTTTGTTGTCACAGCAGGTGTTTCGTTTATCATGTCTAGAGGGTATATC ACCCCCATCCCATCCAACAAACGACCTTCTTCTTTCGCTTCGTCGGAACA CAGAAATTTGTGTGCCGTTTTGCCACATGCACACACCCCCAACGAACCTC TCGCTGTTTTTTGTGTCAACAGCAGTAGCAGCGACACTTGAACCTATTCA GCAGCTCCCGAGCGTACTACCGAGAGCAATTTTTTTTTGCACAACGAATC CATCGCTATTCATAGATATAGCGTCCAGCATAATCCAGCCAATGATTCCA TTGCGTTAGCCACCTGTGCTTTTCCCATCGCCCCCCAACATCCATCCAAC CTATAGACAGCGGGTCTAGAATACGTTACCAAATGAATCCATAGCGTTAG CGGAGCCGGCCTAAATGTTTTTTATCTTTACCCCCCCAACCGTCCCCTCC TCGACAGCTTCCCGTCGTGGGAAAAGCCATCATTGCGGCGGCCCTGCTGA ACTCGGTCTACTCCTTCGCCTGGGACGTGAAGATGGACTGGGGGCTTGGC CAACGGGGGAGCCGCAGGTGGGGGCTCCGCAACACGCTGCTCATCTGCCA CGAGGCCCCCTGGCCGTACTACGTGGCGGTGGCAGTCGACTTGGTGCTGC GGCTCACGTGGGTGGCTCGGCTGGCGGAGGAACGGTTCAGGAGCGTGGAC ATGGTGCTAACGCTGGAGCTAGTAGAGGTTAGTGATGTTGGGGGCGGGAT GGGGATTCGGCACCGGAACGTGTTGTTGTGGCTGGCTGTCGTCTTCACAT CAGTTACCGTTCGATGTGTATGCACAATACCTGTATTTGTGGAGGAGCGA TGTGCGGCATGGTTTGTTCGAGGTCGGTTTGGGCGTGCACCGAACAAGAT CGTGCTTCGTTACGTGCCTCACGATTGGATGGGCCGTCGGTTCTTTCTTC TTGGTCGGTTCTCAAGGTTCTTGAAGGCTTTTCTGAAATTGATGAATCGA CGGGCAAAGACGCCATGCCACTGGTTGAAGCAGTGCAGCCTAAAGAGCCG TTGCTTGAGAGGTAGAAAACGTACCCATCAAGCGGACCCCCTGTCTCGTT CCTGCCTTCAGCAGCCCCCCCCCCCCTCCTCCAGCAAAGTGCCCCTCTTC GTAGGGGGGTGATACCACACACCCTGTCCGCGTCCTCTCCCCAATCGAGC CGTCTAACGTTTACCCTTTTCGCGCTGACCTGAACTTGTGGGACGTCTTG AAGCAGATCCTACGGCGTTCGATGTGGAACGTGTTCCGATTGGAGTGGGA GTGCATCCAGTGCCTCGGTGGCGCGAAGGCTGTCCGGCTAGACAAGGGAT CCGACGCCCTTCGTGTATGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig18018:505..3474-

>mRNA_Ecto-sp13_S_contig18018.5526.1 ID=mRNA_Ecto-sp13_S_contig18018.5526.1|Name=mRNA_Ecto-sp13_S_contig18018.5526.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=786bp|location=Sequence derived from alignment at Ecto-sp13_S_contig18018:505..3474- (Ectocarpus species13 EcNAP12_S_4_19m)
CCCCCGGTCGGCCCGGAACGCAGGCAACACACGGCGCTGTTCTTCACGTC
GCTGGCGGGCGTCTTCTTCCCGGCGACGGACGTGCACTTCGCCGAGGTGT
TGGTTGCTGACGCGTTGACGAGCCTTTCGAGGGTGTTCGCCGACGTTGCG
GTGACCTTCCTGCTCGTGGCCAAGGGCTGGGGGATGAGGTACCCCGGGTG
GGCATTCTTGTACACCCCCTGCGTGTTCGCCAGCTTTCCTTACTGGGTCC
GTGTGCGGCAGTGCGTGATGCAACTCACTTACGAGGTGGACCCGAAACGG
AAGTTGCTATTGGCAATAAACGTCGGCAAGTACCTCAGCGCCTTCCCGGT
GATCTGGCTCACCGGGTACCAGGCGATGCGGCACTACGACGGGGCTGCGT
ATCTTCCCGTCGTGGGAAAAGCCATCATTGCGGCGGCCCTGCTGAACTCG
GTCTACTCCTTCGCCTGGGACGTGAAGATGGACTGGGGGCTTGGCCAACG
GGGGAGCCGCAGGTGGGGGCTCCGCAACACGCTGCTCATCTGCCACGAGG
CCCCCTGGCCGTACTACGTGGCGGTGGCAGTCGACTTGGTGCTGCGGCTC
ACGTGGGTGGCTCGGCTGGCGGAGGAACGGTTCAGGAGCGTGGACATGGT
GCTAACGCTGGAGCTAGTAGAGATCCTACGGCGTTCGATGTGGAACGTGT
TCCGATTGGAGTGGGAGTGCATCCAGTGCCTCGGTGGCGCGAAGGCTGTC
CGGCTAGACAAGGGATCCGACGCCCTTCGTGTATGA
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