mRNA_Ecto-sp13_S_contig10594.552.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig10594.552.1 vs. uniprot
Match: A0A6C0HCA8_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HCA8_9ZZZZ) HSP 1 Score: 67.4 bits (163), Expect = 6.900e-11 Identity = 28/73 (38.36%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 94 RWRVFNEQAKRRSIAVSISLDEYSSIVRTACSYCGEFTYEGYSGVDRVQNAGTYEIDNVVACCKTCNFMKGPL 312
++R++ + R + +S DE+ SIV C YCG + +G+DR+ + Y +DN VACCK CN+MK L
Sbjct: 228 KFRLYQKSCLERCLEFKLSFDEFISIVNNDCFYCGYKNSDFVNGIDRIDSKKGYILDNCVACCKMCNYMKASL 300
BLAST of mRNA_Ecto-sp13_S_contig10594.552.1 vs. uniprot
Match: A0A6C0B6K3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0B6K3_9ZZZZ) HSP 1 Score: 65.1 bits (157), Expect = 4.460e-10 Identity = 23/58 (39.66%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 139 VSISLDEYSSIVRTACSYCGEFTYEGYSGVDRVQNAGTYEIDNVVACCKTCNFMKGPL 312
+ ++++++ SI + C YCG +G++G+DR+ + YEIDN V+CC CN MKG +
Sbjct: 254 IDLTIEQFESITKQPCYYCGIIQDKGFNGIDRMDSTKGYEIDNCVSCCTECNMMKGAV 311
BLAST of mRNA_Ecto-sp13_S_contig10594.552.1 vs. uniprot
Match: A0A0F9TZ00_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9TZ00_9ZZZZ) HSP 1 Score: 59.3 bits (142), Expect = 3.960e-9 Identity = 30/79 (37.97%), Postives = 41/79 (51.90%), Query Frame = 1
Query: 100 RVFNEQAKRRSIAVSISLDEYSSIVRTACSYCG--------EFTYEGY---SGVDRVQNAGTYEIDNVVACCKTCNFMK 303
R + AKRR++ +SL + + C YCG + Y GY +G+DRV NA Y ++NVV CC CN MK
Sbjct: 17 RRYKYSAKRRNLEFDLSLGDCEKLFGNVCYYCGSNPQQIITQKNYNGYFEYNGIDRVNNAKGYTVENVVTCCVKCNSMK 95
BLAST of mRNA_Ecto-sp13_S_contig10594.552.1 vs. uniprot
Match: A0A6C0KWM1_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KWM1_9ZZZZ) HSP 1 Score: 59.7 bits (143), Expect = 3.010e-8 Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 106 FNEQAKRRSIAVSISLDEYSSIVRTACSYCGEFTYEG--YSGVDRVQNAGTYEIDNVVACCKTCNFMKGPL 312
+ +A +R + ++L+E+++I C YCG+ E +G+DR N Y I+N VACC CN+MKG L
Sbjct: 220 YKYRANKRILLFELTLEEFTNIRNNPCLYCGKENKEKTHQNGIDRKNNTVGYTIENSVACCGGCNYMKGEL 290
BLAST of mRNA_Ecto-sp13_S_contig10594.552.1 vs. uniprot
Match: A0A6C0LRQ9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LRQ9_9ZZZZ) HSP 1 Score: 57.8 bits (138), Expect = 1.660e-7 Identity = 25/79 (31.65%), Postives = 42/79 (53.16%), Query Frame = 1
Query: 76 KVDLVYRWRVFNEQAKRRSIAVSISLDEYSSIVRTACSYCGEFTYEGYSGVDRVQNAGTYEIDNVVACCKTCNFMKGPL 312
+ ++ ++ + + R + I+ DE+ +IV YCG G+DR ++ Y +DN +ACCK CN+MKG L
Sbjct: 220 RTNIYEKYNRYIKSCNERCLDFRITYDEFINIVXXXXXYCGYXXXXXXXGIDRKNSSIGYILDNCIACCKMCNYMKGSL 298
BLAST of mRNA_Ecto-sp13_S_contig10594.552.1 vs. uniprot
Match: A0A3C2CGI7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Nomurabacteria bacterium TaxID=2052152 RepID=A0A3C2CGI7_9BACT) HSP 1 Score: 53.5 bits (127), Expect = 2.180e-6 Identity = 23/80 (28.75%), Postives = 44/80 (55.00%), Query Frame = 1
Query: 97 WRVFNEQAKRRSIAVSISLDEYSSIVRTACSYCGEFTYEGY-----------SGVDRVQNAGTYEIDNVVACCKTCNFMK 303
++ + + AK R ++ ++ +E+ S++ +C YC E E + +G+DR+ ++ Y +NVV CCK CN+ K
Sbjct: 83 FKTYADSAKNRCLSFELTKEEFVSLISKSCFYCNEPPSERWHEARGNGHMLSNGLDRIDSSKGYTTNNVVPCCKKCNYAK 162
BLAST of mRNA_Ecto-sp13_S_contig10594.552.1 vs. uniprot
Match: A0A6C0ITL0_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ITL0_9ZZZZ) HSP 1 Score: 52.8 bits (125), Expect = 9.610e-6 Identity = 26/74 (35.14%), Postives = 41/74 (55.41%), Query Frame = 1
Query: 94 RWRVFNEQAKRRSIAVSISLDEYSSIVRTACSYCGEFTYEGY-SGVDRVQNAGTYEIDNVVACCKTCNFMKGPL 312
R++ + A ++ I +S DE ++ +C YC G+ +G+DR + Y DNVV CCK CN++KG L
Sbjct: 274 RFKYYERCAIQKGINFDLSKDECCNLFDKSCYYCKHKDDNGFLNGIDRKSSYLGYIKDNVVTCCKMCNYIKGSL 347
BLAST of mRNA_Ecto-sp13_S_contig10594.552.1 vs. uniprot
Match: A0A0F9F6T2_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9F6T2_9ZZZZ) HSP 1 Score: 50.8 bits (120), Expect = 4.100e-5 Identity = 27/77 (35.06%), Postives = 38/77 (49.35%), Query Frame = 1
Query: 115 QAKRRSIAVSISLDEYSSIVRTACSYCG---------EFTYEGY--SGVDRVQNAGTYEIDNVVACCKTCNFMKGPL 312
++K+R I ++S D + + C YCG E Y +G+DRV N Y DNVV CCK CN+ K +
Sbjct: 204 RSKKRKINFTLSFDTFVELTSQHCFYCGTKPSNITVNEAGNGDYVSNGIDRVDNNKGYIEDNVVPCCKVCNYAKNTM 280 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10594.552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10594.552.1 >prot_Ecto-sp13_S_contig10594.552.1 ID=prot_Ecto-sp13_S_contig10594.552.1|Name=mRNA_Ecto-sp13_S_contig10594.552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp IRRIRALQKKRYRRSLAYQRRLKARKVDLVYRWRVFNEQAKRRSIAVSISback to top mRNA from alignment at Ecto-sp13_S_contig10594:2139..2453+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig10594.552.1 ID=mRNA_Ecto-sp13_S_contig10594.552.1|Name=mRNA_Ecto-sp13_S_contig10594.552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=315bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10594:2139..2453+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10594:2139..2453+ >mRNA_Ecto-sp13_S_contig10594.552.1 ID=mRNA_Ecto-sp13_S_contig10594.552.1|Name=mRNA_Ecto-sp13_S_contig10594.552.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=315bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10594:2139..2453+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |