prot_Ecto-sp13_S_contig17961.5489.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17961.5489.1
Unique Nameprot_Ecto-sp13_S_contig17961.5489.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17961.5489.1 vs. uniprot
Match: D7FXM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM6_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 5.710e-26
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 
Query:    1 MADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAPPRGDSESGDGTDGDDRA 59
            MADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAP RGD ESGDGTDGDDRA
Sbjct:  458 MADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAPRRGDGESGDGTDGDDRA 516
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BLAST of mRNA_Ecto-sp13_S_contig17961.5489.1 vs. uniprot
Match: A0A6H5L3A9_9PHAE (Rab3 GTPase-activating protein catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A9_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 2.730e-25
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0 
Query:    1 MADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAPPRGDSESGDGTDGDDRA 59
            MADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAPPRGD ESG GT GDDRA
Sbjct:  457 MADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAPPRGDGESGGGTHGDDRA 515
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17961.5489.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXM6_ECTSI5.710e-2696.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3A9_9PHAE2.730e-2594.92Rab3 GTPase-activating protein catalytic subunit n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17961contigEcto-sp13_S_contig17961:259..1299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17961.5489.1mRNA_Ecto-sp13_S_contig17961.5489.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17961 184..2176 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17961.5489.1 ID=prot_Ecto-sp13_S_contig17961.5489.1|Name=mRNA_Ecto-sp13_S_contig17961.5489.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
MADICSADAEAELSSARERARHIGAVLGPSTRELIARMTTAPPRGDSESG
DGTDGDDRAGAAAASQSRIAPHRVARATALFF*
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