mRNA_Ecto-sp13_S_contig1782.5415.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Match: D7FJK5_ECTSI (UBX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK5_ECTSI) HSP 1 Score: 765 bits (1976), Expect = 3.040e-275 Identity = 397/423 (93.85%), Postives = 406/423 (95.98%), Query Frame = 1
Query: 13 MRTWRYYVLPLLGCFIGGLASNLQGAFDQIVSHHAKDLRALNRTLGSLTNIAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVRQALDLLSARCLHQSESGKPAAEDEPRQASGFNPFATAFSRKSRTRLQERAEQGLAHLSDSQAKRQQRFSTLEERQVTILLPQQQHEASAETEEQEEYGEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVFLQARFNSKESVETIYQVFGQVLSIEAGVDGQFGHNFELFMAPPTRVLPQDSTQSLEDSNILAPACVLHLRWKSGEAGLQTWAQNFEERLSRATMDGSALPRVPYSSRFDVPEAISSRRPQELPPAEKGGQDDGSESESAEEAPDQ 1281
MRTWRYYVLPLLGC IGGLASNLQGAFDQIVSHHAKDLRALNRTL SLTNIAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVRQALDLLSAR LHQSESG+PAAE EPR+ASGFNPF TAFSRKSRTRLQERAEQGLAHLS SQAKRQQRFSTLEER VTILLPQQ HEASAE EEQE+ GEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGV+LQARFNSKES+ETIYQVFGQVLS+EA VDGQ HNFELFMAPPTRVLP+DSTQSLEDSNILAPACVLHLRWKSGEAGLQTWAQNFEERLSRATMDG ALPRVPYSSR DVPEAISSRRPQELPPAE+G DDGSESESAEEAP+Q
Sbjct: 1 MRTWRYYVLPLLGCLIGGLASNLQGAFDQIVSHHAKDLRALNRTLDSLTNIAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVRQALDLLSARLLHQSESGRPAAEAEPREASGFNPFTTAFSRKSRTRLQERAEQGLAHLSYSQAKRQQRFSTLEERLVTILLPQQPHEASAEMEEQEQDGEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVYLQARFNSKESLETIYQVFGQVLSMEAEVDGQLCHNFELFMAPPTRVLPRDSTQSLEDSNILAPACVLHLRWKSGEAGLQTWAQNFEERLSRATMDGLALPRVPYSSRLDVPEAISSRRPQELPPAEEGADDDGSESESAEEAPEQ 423
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Match: A0A835YNR5_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR5_9STRA) HSP 1 Score: 106 bits (264), Expect = 4.660e-21 Identity = 114/398 (28.64%), Postives = 169/398 (42.46%), Query Frame = 1
Query: 139 RTLGSLTNIAENLFNEPENPKYRK-IRLLNKVVWERVGSVDGGISFMSALGFDLNP-GTGDGPCFQARTGAPVETDVRQALDLLSARCLHQSES-GKPAAEDEPRQA-------------------SGFNPFATAFSRKSRTRLQERAEQGLAHLSDSQAKRQQRFSTLEERQVTILLP---QQQHEASAETEEQEEYGEQGEADAEQR--------------------ELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVFLQARFNSKESVETIYQVFGQVLSIEAGVDGQFGH-NFELFMAPPTRVLPQDSTQSLEDSNILAPACVLHLRWKSGEAGLQTWAQNFEERLSRATM-DGSALPRVPYSSRFDVPEAIS 1191
+TL L + E + K IRL+N WE VGSV GGI M ALGF+L G G GP F R A R L+L A + + GK + S FNP+A+AFSRK++TR+Q+ + RF +E+R +T+L P + A+A + + EADA V Q R + + F + AA++L LR A+ Y L +R P GV LQAR+N++E +T+ V V + + + H F L PTR L D Q L+++ ++A A V+HL+W++GE + A + RA + G+ ++DVP I+
Sbjct: 9 KTLQLLQRVVEGALQQQNQESAAKSIRLMNSAFWESVGSVPGGIGLMMALGFELEDRGDGRGPAFVLRGDAD-----RSLLELAQALLQEELAALGKGSVSSSXXXXXXXXXXXXXIGAIAGASAQSDFNPYASAFSRKAKTRVQDXXXXXXXXXXXQRRAHLLRFDKMEDRNITVLQPLTGKPATGAAATSADANASLSSSEADAASSGDHSSEYDXXXXXXXXLSAATASAVLQAIRSSRARQQTQPFASAAARRLHALRAARLRAYALVNVRFPDGVQLQARYNAQE--DTVGHV---VDVVRHSLRREVRHLPFRLSALGPTRALLPD--QLLQEAGMVAAANVVHLKWEAGEEAKSSAAMAETMSVLRAELVQGARCLAAARREQYDVPPPIT 394
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Match: A0A6L5B8D6_APIGR (UBX domain-containing protein n=1 Tax=Apium graveolens TaxID=4045 RepID=A0A6L5B8D6_APIGR) HSP 1 Score: 65.1 bits (157), Expect = 1.950e-7 Identity = 76/335 (22.69%), Postives = 130/335 (38.81%), Query Frame = 1
Query: 163 IAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVRQALDLLSARCLHQSESGKPAAEDEPRQASGFNPFATAFSRKSRTRLQERAEQGLAHLSDSQAKRQQRFSTLEERQVTILLPQQQHEASAETEEQEEYGEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVFLQARFNSKESVETIYQVFGQVLSIEAGVDGQFGHNFELFMAPPTRVLPQ-----DSTQSLEDSNILAPACVLHLRWKSGEAGLQTWAQNFEERLSRATMDGSALPRV 1152
+ N+ EPEN K+RKIR+ N + E + V GG+ + LGF+L G+ + V+ A+ LL+ + L S+S DEP + + F FS E I+LP ++ SAE E++ A + R+++ ++ ++ K+ ++ K Y + RI+ P GV LQ F+ +E +YQ L E ++ FEL RV+P +LE+ + L PA ++ R ++ + T N + + SA+P +
Sbjct: 195 LLSNIVKEPENVKFRKIRMGNLKIKEAIADVVGGVELLEFLGFELQEEGGEMWAIMGAPSGDMIAVVKNAIALLTPQSLEDSKSSVSVKVDEPVEIKQVDRQTRVF-----------------------------FSVSENIADKIVLPDSFYKLSAE------------------EIKREADMKRKKIAESQL--LVPKSYKEKQVKAARKRYTRAVIRIQFPDGVVLQGVFSPREPTTALYQFVSPALK-EPSLE------FELLDPVLRRVIPHFPPAGKKIITLEEED-LVPAALIKFRPIETDSIVFTGLSNELLEIMEPLIPDSAVPAI 472
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Match: V7CQC8_PHAVU (UBX domain-containing protein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7CQC8_PHAVU) HSP 1 Score: 63.2 bits (152), Expect = 7.910e-7 Identity = 75/304 (24.67%), Postives = 129/304 (42.43%), Query Frame = 1
Query: 163 IAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVR---QALDLLSARCLHQSESGKPAAEDEPRQASGFNPFATAFSRKSRTRLQERAEQGLAHLSDSQAKRQQR--FSTLEERQVTILLPQQQHEASAETEEQEEYGEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVFLQARFNSKESVETIYQVFGQVLSIEAGVDGQFGHNFELFMAPPTRVLPQ-----DSTQSLEDSNILAPACV 1044
+ N+ EPEN K+R+IR+ N + E VG + GG+ +S LGF+L G+ A P E ++ +A+ LL ++ L Q + G P ED A++G A Q RQ + F+ E I LP ++ SAE E++ A L R+++ + ++ ++ K+ + + K Y + RI+ P GV LQA F E +Y+ L E G+ H + RV+P+ D+ +++E+ +++ A +
Sbjct: 193 LLRNIGREPENVKFRRIRMNNPKIKEAVGDIAGGVELLSFLGFELREENGE---TWAVMEVPREEQIKFIKEAIALLESQLLQQQQ-GPPKGEDA-----------------------NSAQRG-AKAEPKQVDRQVKVFFAVPESVAARIELPDSFYKLSAE------------------EVKREADLRRKKIADSQL--LIPKSLKEKQAKASRKRYTKTIIRIQFPDGVVLQAVFAPWEPTTALYEFVSSALK-EPGLQFDLMHP----VVVQRRVIPRFPKAGDNAKTIEEEDLVPSALI 443
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Match: A0A166EF88_DAUCS (UBX domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166EF88_DAUCS) HSP 1 Score: 62.8 bits (151), Expect = 1.060e-6 Identity = 57/250 (22.80%), Postives = 97/250 (38.80%), Query Frame = 1
Query: 163 IAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVRQALDLLSARCLHQSESGKPAAEDEPRQASGFNPFATAFSRKSRTRLQERAEQGLAHLSDSQAKRQQRFSTLEERQVTILLPQQQHEASAETEEQEEYGEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVFLQARFNSKESVETIYQVFGQVL 912
+ N+ EPEN K+RKIR+ N + E + V GG+ + LGF+L G+ V+ A+ LLS + + +S+S P EP + + F FS E I+LP ++ +AE E++ A + R+++ ++ ++ K+ ++ K Y + RI+ P GV LQ F+ +E +YQ L
Sbjct: 198 LLSNIVKEPENVKFRKIRMGNLKIKEAIADVVGGVELLEFLGFELQEEGGEMWAIMGAPSGDTIAAVKNAIALLSPQIVEESKSNIPVKAVEPVELKQVDRQTRVF-----------------------------FSVSENIAAKIVLPDSFYKLTAE------------------EIKREADMKRKKIAESQL--LVPKSYKEKQVKAARKRYTKAVIRIQFPDGVVLQGVFSPREPTTALYQFVSSAL 398
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Match: A0A7K6L4W0_9CORV (UBXN6 protein (Fragment) n=6 Tax=Passeriformes TaxID=9126 RepID=A0A7K6L4W0_9CORV) HSP 1 Score: 62.4 bits (150), Expect = 1.290e-6 Identity = 65/269 (24.16%), Postives = 100/269 (37.17%), Query Frame = 1
Query: 118 KDLRALNRTLGSLTNIAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLN----PGTGDGPCFQARTGAPVETDVRQALDLLSARCLHQSESGKPAAEDEPRQASGFNPFATAFSRKSRTRLQERAEQGLAHLSDSQAKRQQRFSTLEERQVTILLPQQQHEASAETEEQEEYGEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVFLQARFNSKESVETIYQVFGQVL 912
KD + + ++ +N++ PE KYRKI+L NKV ER+ ++G F A+GF+ PG G ++ ++ L+ L C Q S +P RQ + F P A +R L +L+ + +R+QR T E V + W R TRA ++ R + Y Y L R+R P G LQ F ++ESV +Y + L
Sbjct: 164 KDREKVRACVETMAKYLDNIYLHPEEEKYRKIKLQNKVFQERISCLEGTHKFFQAVGFETKTLPVPGQGKNSGQATEEYYVLKEEMLSRLEELKD-CKEQLLSSEPVRAQLHRQLTVFQPSPAA----ARFELPH----DFFNLTAEELRREQRLRT----------------------------------------EAVEKAWMLR----------TRAMREKEEQREMRKYNYTLLRVRFPDGYILQGTFYARESVSVLYNFVREAL 373
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Match: UPI000B8CB61C (plant UBX domain-containing protein 2 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CB61C) HSP 1 Score: 62.0 bits (149), Expect = 1.880e-6 Identity = 78/328 (23.78%), Postives = 131/328 (39.94%), Query Frame = 1
Query: 154 LTNIAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVR---QALDLLSARCLHQSESGKPAAEDEPRQASGFNPFATAFSRKSRTRLQERAEQGLAHLSDSQAKRQQRFSTLEERQVTILLPQQQHEASAETEEQEEYGEQGEADAEQRELELVAQLWRERMGNDEV---ERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVFLQARFNSKESVETIYQVFGQVLSIEAGVDGQFGHNFELF-------MAPPTRVLPQDSTQSLEDSNILAPACVLHLRWKSGEAGLQTWAQN 1098
+ + N+ EPENPK+RKIR+ N + E +G V G + + LGF+L G+ + GAP E + +A+ LL R E+EP++ F A S + + L + + + FS E I LP + SAE EL+ A ++++ ++ + ++ + AK R K Y + R++ P GV LQ F E +Y+ L E G++ FEL P+ P + ++L+D + L P+ ++ R ++ L T N
Sbjct: 197 ILRLLRNIVKEPENPKFRKIRMSNPKIREAIGEVGGAVELLEFLGFELKEEGGE---ICSMMGAPSEKGISLISKAIALLEPR----------KTEEEPKKTENFKSATPANSEE------------VVQLKKANRQIRIFFSVPESVAAKIELPDSFYNLSAE------------------ELKREADTRKKKIAESQLLIPKSYKEKQAKAAR-----KRYTKTVIRVQFPDGVVLQGIFFPWEPTSALYEFVSSALK-EPGLE------FELLDPVLVRRKVIPSFPAPGEKARTLDDED-LVPSALIKFRPIESDSILFTGLSN 468
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Match: A0A0K9Q8J0_SPIOL (UBX domain-containing protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9Q8J0_SPIOL) HSP 1 Score: 61.2 bits (147), Expect = 3.210e-6 Identity = 72/300 (24.00%), Postives = 122/300 (40.67%), Query Frame = 1
Query: 172 NLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVRQALDLL--SARCLHQSESGKPAAEDEPRQASGFNPFATAFSRKSRTRLQERAEQGLAHLSDSQAKRQQRFSTLEERQVTILLPQQQHEASAETEEQEEYGEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVFLQARFNSKESVETIYQVFGQVLSIEAGVDGQFGHNFELFMAPPTR-------VLPQDSTQSLEDSNILAPACV 1044
N EPENPK+R+IR+ N + E +G V GGI + +GF+L G+ A ++T + L +L S + Q++S S + S K ++++ ++ + D Q K FS E I LP ++ S+E E+ A+L +++M ++ ++ K+ + K Y + R++ P GV LQ F+ KES +Y+ L E G FEL P + P + +LE +++ A V
Sbjct: 197 NTVKEPENPKFRRIRMSNPKIREAIGEVTGGIELLEEVGFELKEEGGE-------MWAVMDTPSEEQLLMLKNSVNLIEQAKS------------SSLSSSLKVASDK--VEVEKKVKENEPLIIDRQIK--VFFSVSESVAARITLPDSFYKLSSE------------------EVRREAELRKKKMAESQL--LIPKSFKEKQAQAARKRYTRTIIRVQFPDGVVLQGVFSPKESTSALYEFVSVALKQE-------GLEFELIHPVPLKRRLIPCFPAPGERASTLEQEDLVPSALV 446
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Match: A0A803KY06_CHEQI (UBX domain-containing protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803KY06_CHEQI) HSP 1 Score: 60.8 bits (146), Expect = 4.460e-6 Identity = 66/278 (23.74%), Postives = 114/278 (41.01%), Query Frame = 1
Query: 163 IAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVRQALDLLSARCLHQSESGKPAAEDEPRQASGFNPFATAFSRKSRTRLQERAEQGLAHLSDSQAKRQQRFSTLEERQVTILLPQQQHEASAETEEQEEYGEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVFLQARFNSKESVETIYQVFGQVLSIEAGVDGQFGHNFELFMAPPT--RVLP 990
+ N+ EPENPK+RKIR+ N + E +G V GGI + +GF+L G+ + ++T L L ++ E KP G A + ++++ ++ + D + K FS E I+LP ++ S+E E+ A++ +++M + ++ ++ K+ + K Y + R++ P GV LQ F+ KE +Y+ L Q G FEL P RV+P
Sbjct: 212 LLRNIVKEPENPKFRKIRMGNPKIREAIGEVTGGIELLEEVGFELKEEGGE-------MWSVMDTPSEDRL-LKIKETVNIMEQAKP---------DGSVSSAPLVKVDEKVEVEKKVKENEPKIIDREIK--VFFSVSESVAARIVLPDSFYQLSSE------------------EVRREAEMRKKKMADSQL--LIPKSFKEKQAQAARKRYTRTIIRVQFPDGVVLQGVFSPKEPTSVLYEFVSSALK-------QQGLEFELIHPVPLKRRVIP 443
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Match: UPI0018AECCB7 (plant UBX domain-containing protein 2 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AECCB7) HSP 1 Score: 60.1 bits (144), Expect = 6.380e-6 Identity = 78/330 (23.64%), Postives = 133/330 (40.30%), Query Frame = 1
Query: 163 IAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVRQALDLLSA--RCLHQSESGKPAAEDEPRQASGFNPFATAFSRKSRTRLQERAEQGLAHLSDSQAKRQQRFSTLEERQVTILLPQQQHEASAETEEQEEYGEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVFLQARFNSKESVETIYQVFGQVLSIEAGVDGQFGHNFELFMAPPTRVLPQDSTQ-----SLEDSNILAPACVLHLRWKSGEAGLQTWAQNFEERLSRATMD 1131
+ N+ EPEN K+R+IR+ N + E VG V GG+ + +GF + DG A P E +R D +++ R S A EP++ F ++ QE+ ++ + F E I LP + SA+ E++ A L ++++ + ++ ++ ++ + L K Y L RI P V LQA F +E+ +Y+ L E G++ + H PP RV+P + Q +LED + L P V+ + E+ + T N ++S D
Sbjct: 136 LLRNVVREPENDKFRRIRMGNPKIKEAVGDVKGGVELLECVGFQIAE---DGGEIWATMEVPDEERIRVVKDAVASLERLSLDESSSATIAPKEPKE------FGSSVE-------QEKIDRQVRVF----------FCVSETAAEKIELPDSFYNLSAD------------------EIKREASLRKKKLEDSQL--LIPKSYREKQALAARKKYTKTLIRIHFPDNVVLQAVFLPRETTAELYKFVSAALK-EPGIEFELLHP-----TPPKRVVPHLAGQGEKLPTLEDVD-LVPKAVIRFKPIENESMVFTGLSNALLQISEPLTD 412 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1782.5415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1782.5415.1 >prot_Ecto-sp13_S_contig1782.5415.1 ID=prot_Ecto-sp13_S_contig1782.5415.1|Name=mRNA_Ecto-sp13_S_contig1782.5415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=428bp MAVCMRTWRYYVLPLLGCFIGGLASNLQGAFDQIVSHHAKDLRALNRTLGback to top mRNA from alignment at Ecto-sp13_S_contig1782:8871..12558+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1782.5415.1 ID=mRNA_Ecto-sp13_S_contig1782.5415.1|Name=mRNA_Ecto-sp13_S_contig1782.5415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3688bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1782:8871..12558+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1782:8871..12558+ >mRNA_Ecto-sp13_S_contig1782.5415.1 ID=mRNA_Ecto-sp13_S_contig1782.5415.1|Name=mRNA_Ecto-sp13_S_contig1782.5415.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1284bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1782:8871..12558+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |