prot_Ecto-sp13_S_contig17747.5378.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17747.5378.1
Unique Nameprot_Ecto-sp13_S_contig17747.5378.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length191
Homology
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 9.000e-127
Identity = 183/191 (95.81%), Postives = 188/191 (98.43%), Query Frame = 0
Query:    1 MPRSEAAEIEAAVTKVARSICPGVICQACGSYRRGKNNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGESRLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLNDKGLFKVDPFSGEEVPNSGYSCLREEDVFSALGMDWIEPKDRKGGG 191
            MPRSEAAEIEAAVTKVA+SICPGVICQACGSYRRGK+NCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGE ++HRRLD+KLYPTSMFAFAVLYFTGSGDFNMNMRCFAK KGLKLNDKGLFKVDPFSGEEVPNSGYSCLREEDVFSALGMDWIEPKDRKG G
Sbjct:  443 MPRSEAAEIEAAVTKVAQSICPGVICQACGSYRRGKSNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGEGQIHRRLDVKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKSKGLKLNDKGLFKVDPFSGEEVPNSGYSCLREEDVFSALGMDWIEPKDRKGVG 633          
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 4.830e-116
Identity = 175/203 (86.21%), Postives = 179/203 (88.18%), Query Frame = 0
Query:    1 MPRSEAAEIEAAVTKVARSICPGVICQA------------CGSYRRGKNNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGESRLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLNDKGLFKVDPFSGEEVPNSGYSCLREEDVFSALGMDWIEPKDRKGGG 191
            MPRSEAAEIEAAVTKVA+SICPGVICQA            CGSYRR K NCGDVDVLIRPPEGQEDS MFLEL+KELTET  ITDRLA+PEGPYTPGKPQTFMGVCKLPGE RLHRRLDIKLYP SMFAFAVLYF GSGDFNMNMRCF K KGLKLNDKGLFKVDPFSGEEVPNSGYSC REEDVF+ALGMDWIEPKDRKG G
Sbjct:  403 MPRSEAAEIEAAVTKVAQSICPGVICQASFLTSPRRRTEACGSYRRVKRNCGDVDVLIRPPEGQEDSSMFLELVKELTETRLITDRLAVPEGPYTPGKPQTFMGVCKLPGEGRLHRRLDIKLYPASMFAFAVLYFAGSGDFNMNMRCFGKSKGLKLNDKGLFKVDPFSGEEVPNSGYSCFREEDVFTALGMDWIEPKDRKGVG 605          
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Match: D7G2F8_ECTSI (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F8_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 3.520e-97
Identity = 144/190 (75.79%), Postives = 163/190 (85.79%), Query Frame = 0
Query:    1 MPRSEAAEIEAAVTKVARSICPGVICQACGSYRRGKNNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGESRLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLNDKGLFKVDPFSGEEVPN-SGYSCLREEDVFSALGMDWIEPKDRKG 189
            MPRSEAAEIEA VTKVA+SICPGVICQACGSYRRGK++CGDVDVLIRPPEGQEDSPMF +LIK L ETGFITD+L +  GP+ PGK Q+FMG+CKLPG  RLHRR+DIK YPTS+FAFAVLYFTGS  FN +MR FAK KGLKL+DKGL +V+  +GEEV     YSCLREEDVF+ALG++W EPKDR G
Sbjct:  184 MPRSEAAEIEAVVTKVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPPEGQEDSPMFDDLIKRLVETGFITDKLTLAGGPHRPGKSQSFMGICKLPGTGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSYSCLREEDVFTALGLEWREPKDRDG 373          
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 1.720e-85
Identity = 137/190 (72.11%), Postives = 159/190 (83.68%), Query Frame = 0
Query:    1 MPRSEAAEIEAAVTKVARSICPGVICQACGSYRRGKNNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGESRLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLNDKGLFKVDPFSGEEVPN-SGYSCLREEDVFSALGMDWIEPKDRKG 189
            MPRSEAAEIEA VT+VA+SICPG    ACGSYRRGK++CGDVDVLIRPPEGQEDSP+F +LIK L ETGFITD+L +   P+ PGK Q+FMG+CKLPG+ RLHRR+DIK YPTS+FAFAVLYFTGS  FN +MR FAK KGLKL+DKGL +V+  +GEEV     YSCLREEDVF+ALG++W EPKDR G
Sbjct:  660 MPRSEAAEIEAVVTRVAQSICPG----ACGSYRRGKSHCGDVDVLIRPPEGQEDSPVFDDLIKRLVETGFITDKLTLAGSPHKPGKSQSFMGICKLPGKGRLHRRVDIKFYPTSLFAFAVLYFTGSSHFNRSMRSFAKIKGLKLSDKGLCRVNTVNGEEVHRFPSYSCLREEDVFTALGLEWREPKDRDG 845          
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Match: A0A7S2HHH8_9STRA (DNA polymerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHH8_9STRA)

HSP 1 Score: 169 bits (427), Expect = 9.840e-49
Identity = 100/213 (46.95%), Postives = 124/213 (58.22%), Query Frame = 0
Query:    1 MPRSEAAEIEAAVTKVARSICPGVICQACGSYRRGKNNCGDVDVLIRPPE---GQEDSP-------MFLELIKELTETGFITDRLAMPEGPYTPGK----------------PQTFMGVCKLPGESRLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLNDKGLFKVDPFSGEEVPNSGYSCLREEDVFSALGMDWIEPKDR 187
            MPRSEA  I A VTK ARS+ PG     CGSYRRGK + GDVDVL+ PP    GQ+          +   L+++L  + F+TD L +P   YTP K                PQT+MGVCKL G   LHRRLDIK+YP  M AFA +YFTGS  FN +MRC A+R+G  L+DKGL K   F    V     +C  E+++F  +GMDW EP +R
Sbjct:   83 MPRSEATAIGAMVTKEARSLVPGCFAMVCGSYRRGKQSSGDVDVLLGPPPSATGQDSEADEAAMQSLLPNLLQQLHTSNFLTDDLTLP---YTPFKSSGRYPSDGNSAEGSLPQTYMGVCKL-GADHLHRRLDIKVYPREMIAFAQMYFTGSDYFNRSMRCLARRQGWSLSDKGLKKR--FGAGSV-----TCHSEKEIFEVMGMDWKEPHER 284          
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Match: UPI0016035DFB (DNA polymerase lambda-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016035DFB)

HSP 1 Score: 171 bits (433), Expect = 7.500e-47
Identity = 95/196 (48.47%), Postives = 124/196 (63.27%), Query Frame = 0
Query:    1 MPRSEAAEIEAAVTKVARSICPGVICQACGSYRRGKNNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGESRLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLND---------KGLFKVDPFSGEEVPNSGYSCLREEDVFSALGMDWIEPKDR 187
            MPR EAAEIE  V ++A SI PG++  ACGSYRRGK NCGDVDVLI  P+G+    +F +++  L ETGF+TD L   E     G+ + ++GVC+LPGE R HRRLDI + P S FA A++YFTGS  FN +MR  A +KG+ L++         KG  K+  F G  +P     C  EEDVF  LG+D+  P +R
Sbjct:  416 MPREEAAEIERTVREMAESINPGLMAMACGSYRRGKLNCGDVDVLITHPDGKSHKGIFQKVLNGLKETGFLTDDLVTQEDN---GEQKKYLGVCRLPGEGRKHRRLDIIVIPYSEFACALMYFTGSAHFNRSMRALAIKKGMSLSEHSLNTGVIRKGKEKI--FGGTPLP-----CQTEEDVFRHLGLDYRPPHER 601          
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Match: A0A6P4YBK9_BRABE (DNA polymerase lambda n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YBK9_BRABE)

HSP 1 Score: 171 bits (432), Expect = 1.000e-46
Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 0
Query:    1 MPRSEAAEIEAAVTKVARSICPGVICQACGSYRRGKNNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGESRLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLND---------KGLFKVDPFSGEEVPNSGYSCLREEDVFSALGMDWIEPKDR 187
            MPR EAAEIE  V ++A SI PG++  ACGSYRRGK NCGDVDVLI  P+G+    +F +++  L ETGF+TD L   E     G+ + ++GVC+LPGE R HRRLDI + P   FA A++YFTGS  FN +MR  A +KG+ L++         KG  K+  F G  +P     C  EEDVF  LG+D+  P +R
Sbjct:  413 MPRDEAAEIEKTVREMAESINPGLMAMACGSYRRGKTNCGDVDVLITHPDGKSHKGIFQKVLSGLRETGFLTDDLVTQEDN---GEQKKYLGVCRLPGEGRKHRRLDIIVVPYGEFACALMYFTGSAHFNRSMRALAIKKGMSLSEHSLNTGVIRKGKEKI--FGGTPLP-----CHTEEDVFKHLGLDYRPPHER 598          
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Match: C3YJ28_BRAFL (DNA polymerase (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YJ28_BRAFL)

HSP 1 Score: 168 bits (426), Expect = 1.950e-46
Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 0
Query:    1 MPRSEAAEIEAAVTKVARSICPGVICQACGSYRRGKNNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGESRLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLND---------KGLFKVDPFSGEEVPNSGYSCLREEDVFSALGMDWIEPKDR 187
            MPR EAAEIE  V ++A SI P ++  ACGSYRRGK NCGDVDVLI  P+G+    +F +++  L ETGF+TD L   E     G+ + ++GVC+LPGE R HRRLDI + P S FA A++YFTGS  FN +MR  A +KG+ L++         KG  K+  F G  +P     C  EEDVF  LG+D+  P +R
Sbjct:  323 MPREEAAEIERTVREMAESINPDLMAMACGSYRRGKLNCGDVDVLITHPDGKSHKGIFQKVLNGLKETGFLTDDLVTQEDN---GEQKKYLGVCRLPGEGRKHRRLDIIVIPYSEFACALMYFTGSAHFNRSMRALAIKKGMSLSEHSLNTGVIRKGKEKI--FGGTPLP-----CQTEEDVFRHLGLDYRPPHER 508          
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Match: A0A8D2LGY6_VARKO (DNA polymerase n=5 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2LGY6_VARKO)

HSP 1 Score: 162 bits (411), Expect = 2.010e-46
Identity = 87/190 (45.79%), Postives = 118/190 (62.11%), Query Frame = 0
Query:    1 MPRSEAAEIEAAVTKVARSICPGVICQACGSYRRGKNNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGESRLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLNDKGLFKV---DPFSGEEVPNSGYSCLREEDVFSALGMDWIEPKDR 187
            MPR EAAEIE  V + A+S+ PG++C ACGS+RRGK+ CGDVDVL+  P+G     +F +L+  L ++GF+TD L   E     G+ + ++GVC+LPG  R HRRLDI + P   FA A+LYFTGS  FN +MR  AK KG+ L++  L       P   + VP        E+DVF  LG+ + EP +R
Sbjct:   90 MPREEAAEIEQVVREAAQSMNPGLVCVACGSFRRGKSTCGDVDVLVTHPDGHSHQGVFKKLLDSLWKSGFLTDDLVSQEDN---GRQKKYLGVCRLPGPGRRHRRLDIIVVPYDEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTGVVRRPGGLKAVPGLPLLTRTEKDVFMHLGLPYREPHER 276          
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Match: A0A8C0G3I4_CHEAB (DNA polymerase n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0G3I4_CHEAB)

HSP 1 Score: 163 bits (412), Expect = 2.010e-46
Identity = 90/190 (47.37%), Postives = 119/190 (62.63%), Query Frame = 0
Query:    1 MPRSEAAEIEAAVTKVARSICPGVICQACGSYRRGKNNCGDVDVLIRPPEGQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGESRLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLNDKGLFK--VDPFSGEEV-PNSGYSCLREEDVFSALGMDWIEPKDR 187
            MPR EAAEIE  V+K A S+ PG++C ACGSYRRGK  CGDVDVL+  P+GQ    +F +L+  L  +GF+TD L + E     G  + ++GVC+LPG  R HRRLDI + P + FA A+LYFTGS  FN +MR  AK +G+ L++  L    V    G +V P        E DVF+ LG+ + EP +R
Sbjct:  103 MPREEAAEIEQTVSKAAWSLNPGLVCVACGSYRRGKATCGDVDVLVTHPDGQSHRGIFGKLLDSLRRSGFLTDDLVIQEDS---GNQKKYLGVCRLPGPGRRHRRLDIIVAPHAEFACALLYFTGSAYFNCSMRALAKTRGMSLSEHALHTAVVRAPGGRKVGPGLVLPTPTERDVFTLLGLAYREPTER 289          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17747.5378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2F7_ECTSI9.000e-12795.81DNA polymerase lambda n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JQ91_9PHAE4.830e-11686.21DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G2F8_ECTSI3.520e-9775.79DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JHQ3_9PHAE1.720e-8572.11DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A7S2HHH8_9STRA9.840e-4946.95DNA polymerase n=1 Tax=Dictyocha speculum TaxID=35... [more]
UPI0016035DFB7.500e-4748.47DNA polymerase lambda-like n=1 Tax=Branchiostoma f... [more]
A0A6P4YBK9_BRABE1.000e-4647.96DNA polymerase lambda n=1 Tax=Branchiostoma belche... [more]
C3YJ28_BRAFL1.950e-4647.96DNA polymerase (Fragment) n=1 Tax=Branchiostoma fl... [more]
A0A8D2LGY6_VARKO2.010e-4645.79DNA polymerase n=5 Tax=Varanus komodoensis TaxID=6... [more]
A0A8C0G3I4_CHEAB2.010e-4647.37DNA polymerase n=1 Tax=Chelonoidis abingdonii TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002008DNA polymerase family X, beta-likePRINTSPR00870DNAPOLXBETAcoord: 28..47
score: 51.0
coord: 104..112
score: 60.0
coord: 170..187
score: 44.44
coord: 119..126
score: 75.0
IPR022312DNA polymerase family XPRINTSPR00869DNAPOLXcoord: 27..41
score: 43.59
coord: 169..187
score: 44.94
coord: 41..49
score: 57.26
coord: 121..134
score: 46.7
coord: 105..114
score: 36.92
IPR028207DNA polymerase beta, palm domainPFAMPF14792DNA_pol_B_palmcoord: 1..112
e-value: 4.1E-33
score: 114.0
IPR029398DNA polymerase beta, thumb domainPFAMPF14791DNA_pol_B_thumbcoord: 119..187
e-value: 7.8E-20
score: 70.8
NoneNo IPR availableGENE3D3.30.460.10coord: 1..124
e-value: 3.6E-40
score: 138.7
NoneNo IPR availablePANTHERPTHR11276:SF28DNA POLYMERASE LAMBDAcoord: 1..187
NoneNo IPR availablePANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 1..187
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 1..188
IPR037160DNA polymerase, thumb domain superfamilyGENE3D3.30.210.10coord: 125..188
e-value: 4.1E-20
score: 73.5
IPR019843DNA polymerase family X, binding sitePROSITEPS00522DNA_POLYMERASE_Xcoord: 30..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17747contigEcto-sp13_S_contig17747:25..3139 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17747.5378.1mRNA_Ecto-sp13_S_contig17747.5378.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17747 2..3139 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17747.5378.1 ID=prot_Ecto-sp13_S_contig17747.5378.1|Name=mRNA_Ecto-sp13_S_contig17747.5378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
MPRSEAAEIEAAVTKVARSICPGVICQACGSYRRGKNNCGDVDVLIRPPE
GQEDSPMFLELIKELTETGFITDRLAMPEGPYTPGKPQTFMGVCKLPGES
RLHRRLDIKLYPTSMFAFAVLYFTGSGDFNMNMRCFAKRKGLKLNDKGLF
KVDPFSGEEVPNSGYSCLREEDVFSALGMDWIEPKDRKGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002008DNA_pol_X_beta-like
IPR022312DNA_pol_X
IPR028207DNA_pol_B_palm_palm
IPR029398PolB_thumb
IPR037160DNA_Pol_thumb_sf
IPR019843DNA_pol-X_BS