mRNA_Ecto-sp13_S_contig10033.54.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig10033.54.1
Unique NamemRNA_Ecto-sp13_S_contig10033.54.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Match: D7FWM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWM9_ECTSI)

HSP 1 Score: 1123 bits (2906), Expect = 0.000e+0
Identity = 632/733 (86.22%), Postives = 639/733 (87.18%), Query Frame = 3
Query:   33 MAKSSKKQCRTPKPSRKGGGLVVVSQRNLHSNSTPQQHPQAKKGKPGXXXKKKRGLGLADLIAPGDADHSDDFDAPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGEGGSILDAPTAVEGGCHALVFVETTAVAQELVGELKALNLVAFAVHDRTPKVQTQEHVKRFLAATSSERSSVLVLTNSAISRTPPSIGSVKPGHGKLLRVVHFDAPEGKKNAAARARVAGGFFRGRGAGAAEEVYLRGGAEAAGLAPFSFDSTAMGGIRSRLAVAKKLSRAIALSAGEGEERGMQRAAAAAGLEWDEQSS-NESGAEATKREKKRAHAQQAVALRQKVSVLLCQPLLPPLPPPSAALGESGSAAAFTPAP-NAHQSAKELRKKMVILGMIDGPPQHQAANSGPLAXXXXXXXXXXXXXXXAGAAEGRAAAQTRWLDGATGKLFGGSWGGSVRTGASCDTASLELRARVEDAKKGEARGRGAAGEDVAGRGVATVALAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLPALRFLVKNMRSFTVCGGGQTPPKEVARAVICSAGWGAKQSLFGPLSAELSRRVMSFVLSGDLATWRSISAGFGVGVGRQAGGSGQAAPKDTLAFASKKKRKNFNL 2225
            MAKSSKKQCRTPKPSRKGGGLVVVSQRNLHSNSTPQQHPQAKKG   XXX  KRGLGLADL APGD D SDDFDAPPS                       XXXXX                           GEGG I DAPTAVEGGCHALVFVETTAVAQELVGELKAL+LVAFAVHDRTPK QTQEHVKRFLAATSSERSSVLVLTN AISRTPPSIGSVKPGHGKL RVVHFDAPEGKK+AAARARVAGGFFRGRGAGAAEEVYLRGGAEA GLAPFSFDS AMGGIRSRLAVAKKLSRAIALSAGEGEERGMQRAAAAAGLEWDEQSS NE GAEATKREKKRAHAQQAVALRQKVSVLLCQPLLPPLP   AALG SGSAAAF PAP NAHQSAKELRKKMVILGMI GPPQHQAA+SGPLAXXXXXXXX        GAAE RAAAQTRWLDGATGKLFGGSWGG VRTGASCDTASLELRARVEDAKKGE   RGA GEDVAGRGVATVALA+WKPNPDT DPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLP LRFLVKNMRSFTVCGGGQTPP+EVARAV+ SAGWGAKQS FGPLSAELSRRVMSFVLSGDLATWRSISAGFGVG+G QAGG GQAAPKDTLAFASKKKRKNFNL
Sbjct:    1 MAKSSKKQCRTPKPSRKGGGLVVVSQRNLHSNSTPQQHPQAKKGXXXXXXXXKRGLGLADLSAPGDGDDSDDFDAPPSASAVASTGGVAEYIFSSKHHSREXXXXXLLTTRTSDMCATRGQQQHQP-------GEGGGIPDAPTAVEGGCHALVFVETTAVAQELVGELKALSLVAFAVHDRTPKAQTQEHVKRFLAATSSERSSVLVLTNLAISRTPPSIGSVKPGHGKLQRVVHFDAPEGKKDAAARARVAGGFFRGRGAGAAEEVYLRGGAEAVGLAPFSFDSGAMGGIRSRLAVAKKLSRAIALSAGEGEERGMQRAAAAAGLEWDEQSSSNERGAEATKREKKRAHAQQAVALRQKVSVLLCQPLLPPLPXXXAALGGSGSAAAFPPAPKNAHQSAKELRKKMVILGMIHGPPQHQAADSGPLAXXXXXXXX--------GAAEDRAAAQTRWLDGATGKLFGGSWGGIVRTGASCDTASLELRARVEDAKKGETGMRGADGEDVAGRGVATVALARWKPNPDTPDPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLPTLRFLVKNMRSFTVCGGGQTPPREVARAVLHSAGWGAKQSQFGPLSAELSRRVMSFVLSGDLATWRSISAGFGVGIGLQAGGRGQAAPKDTLAFASKKKRKNFNL 718          
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Match: A0A5D6XHR1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHR1_9STRA)

HSP 1 Score: 212 bits (539), Expect = 1.490e-55
Identity = 115/263 (43.73%), Postives = 156/263 (59.32%), Query Frame = 3
Query: 1359 AGAAEGRAAAQTRWLDGATGKLFGGSWGGSVRTGASCDTASLELRARVEDAKKGEA--------RGRGAAGEDVAGRGVATVALAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLH-VPLPALRFLVKNMRSFTVCGGGQTPPKEVARAV-ICSAGWGAKQSLFGPLSAELSRRVMSFVLSGDLATWRSIS 2117
            A  A+ R +AQTRW+D A+G+  GG W G +R GAS D +SL LRA      KG+         RG G       G     + L +WKPN    D +KWGG++GK CGHNEVV+Q LRPF P EV+N+RVCS+  PAPGN GFDGCLE L L CRA  RA+T+WD   F+++   G  +   K  +L  + L AL+ L+ N+RS+T+   G+ PPK + RA+ +C A  G +Q     L   L +R++SF + G    W+ I+
Sbjct:  375 AALADERFSAQTRWMDAASGRQHGGDWDGDIRHGASKDASSLALRAAFCAVLKGDRKRTTMPLQRGEG-------GSSTPLLLLREWKPNRAPVDVDKWGGEFGKACGHNEVVMQSLRPFFPQEVLNSRVCSRLFPAPGNQGFDGCLEHLRLQCRAQQRAMTLWDADCFVYIAATGQVTWTKKNQLLQGLSLAALQCLMVNLRSWTLASRGEVPPKRLVRALQLCCALGGGEQPA-SRLEPALLKRIVSFAVGGSARLWKQIT 629          
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Match: A0A225VZW7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VZW7_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.570e-54
Identity = 108/251 (43.03%), Postives = 142/251 (56.57%), Query Frame = 3
Query: 1377 RAAAQTRWLDGATGKLFGGSWGGSVRTGASCDTASLELRARVEDAKKGEARGRGAAGEDVAGRGVATVA--LAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLPALRFLVKNMRSFTVCGGGQTPPKEVARAV--ICSAGWGAKQSLFGPLSAELSRRVMSFVLSGDLATWRSIS 2117
            R +AQTRW+D A GK  GG W G VR GAS D  SL +R ++                  A RG  T +  L+KW PN +  D EKWGG +GK CGHNEVV+  LR F PLEV+N++VCSK  PAPGN GFDGCLE L   C   G ++T+WD   F+ +   G  +   K  +L + L +L  LV  +RS+TV  GG  PP  V R++   C  G G K  + G +S ++ +R+M+F   G    WR I+
Sbjct:  333 RTSAQTRWMDFAEGKAHGGQWEGDVRHGASKDATSLAMRTKI-----------------CATRGTTTSSTFLSKWTPNKEPVDTEKWGGVFGKVCGHNEVVMNELRAFYPLEVLNSKVCSKLFPAPGNQGFDGCLEHLRYACMDQGVSMTLWDAEYFVFISSHGRVNWSKKSQLLSLSLGSLLCLVPALRSWTVLSGGHMPPNAVLRSIQLCCQLGSGDKHPVDGTMSPKVLKRIMTFAFGGSARLWRQIA 566          
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Match: A0A067CWH8_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CWH8_SAPPC)

HSP 1 Score: 196 bits (497), Expect = 1.080e-53
Identity = 104/254 (40.94%), Postives = 141/254 (55.51%), Query Frame = 3
Query: 1377 RAAAQTRWLDGATGKLFGGSWGGSVRTGASCDTASLELRARVEDAKKGEARGRGAAGEDVAGRGVATVALAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLPALRFLVKNMRSFTVCGGGQTPPKEVARAV----ICSAGWGAKQSLFGPLSAELSRR----VMSFVLSGDLATWRSI 2114
            R +AQT+WLD A+G  FGG W GSVR GAS D+ SL++RA + D KK                       + W+PNP  +D  +WGG +GKPCGHNEVVL  LRPF P EV+N R+CS+  PAPGN G+DGCLE L   C + G+A+TVWD   ++ V K G    + K A L +PL  L++++ N R  T+   GQ PP  +   +     C    G +Q +  P    L RR    V+ +++SG    W  +
Sbjct:   21 RLSAQTQWLDAASGAAFGGEWDGSVRHGASKDSTSLQVRAELFDKKK----------------------KSTWEPNPKPSDAAEWGGPYGKPCGHNEVVLHRLRPFFPQEVLNARICSRDKPAPGNDGYDGCLEHLKWRCASSGKAMTVWDAEQWVFVAKDGQVRRINKTAALQLPLSRLKWMMANFREHTLRCEGQIPPAHLLETISYLGFCG---GVQQDVDAPQVWGLPRRARQMVVGYLVSGSPDQWMRL 249          
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Match: A0A3R7KVT4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KVT4_9STRA)

HSP 1 Score: 202 bits (515), Expect = 6.630e-53
Identity = 109/252 (43.25%), Postives = 141/252 (55.95%), Query Frame = 3
Query: 1377 RAAAQTRWLDGATGKLFGGSWGGSVRTGASCDTASLELRAR---VEDAKKGEARGRGAAGEDVAGRGVATVALAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLPALRFLVKNMRSFTVCGGGQTPPKEVARAV--ICSAGWGAKQSLFGPLSAELSRRVMSFVLSGDLATWRSIS 2117
            R +AQT+W+D A GK +GG W G+VR GAS D  SLELR +   V+D  K                      L+KW PN +  D  KWGG +GK CGHNEVV+  LR F P EV+N++VCSK  PAPGN GFDGCLE L L C A   ++T+WD   FI +   G  +   K  +L + L +L+ LV  +RS+T   GG TPP  V RA+   C  G G K S    L ++  +R+MSF   G    W+ I+
Sbjct:  314 RTSAQTQWMDAAEGKFYGGQWEGAVRHGASKDETSLELRKKLCAVQDQTK------------------KLGFLSKWFPNKEPVDTAKWGGAFGKACGHNEVVMHSLRAFYPQEVLNSKVCSKLFPAPGNQGFDGCLEHLRLACAAKKTSMTLWDAEYFIFISSHGRVTWAKKSQLLSLSLTSLQCLVLALRSWTTACGGHTPPNAVLRAIQLCCQLGSGDKHSSDEKLPSKALKRIMSFAFGGSARLWKQIA 547          
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Match: A0A1V9YH54_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH54_9STRA)

HSP 1 Score: 201 bits (511), Expect = 6.890e-52
Identity = 103/250 (41.20%), Postives = 144/250 (57.60%), Query Frame = 3
Query: 1377 RAAAQTRWLDGATGKLFGGSWGGSVRTGASCDTASLELRARVEDAKKGEARGRGAAGEDVAGRGVATVALAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLPALRFLVKNMRSFTVCGGGQTPPKEVARA----VICSAGWGAKQSLFGPLSAELSRRVMSFVLSGDLATWRSI 2114
            R +AQTRWLD A G  FGG+W G+VR GA+ D  SL +R                       +     A  +W+PNP+ +D  +WGG +GKPCGHNEVV+ HLRPF P EV+N R+C K  PAPGN GFDGCLE L L C+  GRA+TVWD   ++++   G  + L K   LH+PLP L++ + N+R  T+   GQ PP ++ RA    V C    G K  ++G L   + + ++ F+++G    W+ +
Sbjct:  387 RLSAQTRWLDVADGAAFGGAWSGAVRHGATKDETSLAVR-----------------------QAHFQAAAREWQPNPEPSDATEWGGPFGKPCGHNEVVMHHLRPFFPQEVLNARICCKDKPAPGNDGFDGCLEHLQLKCKRDGRAMTVWDAEQWVYITPDGQVARLSKTRALHLPLPLLKWTMNNLRMHTLRCEGQVPPAQLIRALQYLVFCGGVDGDK--VWG-LPQAVRQMIVGFLVTGSSNEWKRL 610          
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Match: A0A7S2WIF0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIF0_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.460e-51
Identity = 137/352 (38.92%), Postives = 174/352 (49.43%), Query Frame = 3
Query: 1104 RQKVSVLLCQPLLPPLPPPSAALGESGSAAAFTPAPNAHQSAKELRKKMVILGMIDGPPQHQAANSGPLAXXXXXXXXXXXXXXXAGAAEGRAAAQTRWLDGATGKLFGGS-WGGSVRTGASCDTASLELRARVEDAKKGEARGRGAAGEDVAGRGVATVALAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLPALRFLVKNMRSFTVCGGGQTPPKEVARAV-----ICSAGW------------GAKQSLFGPL-----SAELSRRVMSFVLSG 2090
            +QK+ VLL +PL P   P    +G  G + A        +S K  R KM +L M        AA+   L                    + R AA+TRWLDGA G+  G   W G  R GA+ D  SL +RA  E       RG   +G      GV      +W+PNP  +   +WGG +GKPCGHNEVV+Q LRPF P+EV NTR+CSKA PAPGN G++GCLE L L CR   RALTVWD S+F H+ + G    LPK  +L  PLP L  L+  MR  T+   G   P +V R V     +  +G             GAKQ   G       S  ++R V+SF+L G
Sbjct:   39 QQKLEVLLARPLFPA--PHGKGVGTGGQSRA--------ESKKVTRAKMEVLAMCGA--SEAAASRRRL--------------------DERVAARTRWLDGALGEHVGCCCWEGEERLGAAKDRISLGVRALHE-------RGVAKSG------GVQPTPSKRWRPNPAPSSVAEWGGPYGKPCGHNEVVMQVLRPFFPMEVTNTRLCSKADPAPGNQGYEGCLEFLQLQCRRRRRALTVWDISAFHHISRDGKHEPLPKADLLAEPLPRLELLIPAMRLVTMHSRGALSPHQVIRCVDWLVLLGVSGMPLDPQLQERESNGAKQHALGARHQDRPSKAITRHVVSFLLPG 345          
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Match: A0A6A3RW30_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3RW30_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.730e-51
Identity = 105/249 (42.17%), Postives = 140/249 (56.22%), Query Frame = 3
Query: 1377 RAAAQTRWLDGATGKLFGGSWGGSVRTGASCDTASLELRARVEDAKKGEARGRGAAGEDVAGRGVATVALAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLPALRFLVKNMRSFTVCGGGQTPPKEVARAV--ICSAGWGAKQSLFGPLSAELSRRVMSFVLSGDLATWRSIS 2117
            R +AQTRW+D A G+  GG W G+VR GAS D  SL +R ++  A+               G+      L+KW PN +  D  KWGG +GK CGHNEVV+  LR F P EV+N++VCSK  PAPGN GFDGCLE L L C A G+++T+WD   F+ +   G  S   K  +L + L +L+ LV  +RS+T    G  PP  V RA+   C  G G K+S    L  +  +R+M+F   G    WR I+
Sbjct:  388 RTSAQTRWMDFAEGRAHGGQWEGAVRHGASKDVTSLAVREKLCAAR---------------GKAKDATFLSKWAPNKEPVDAAKWGGAFGKVCGHNEVVMNALRSFYPQEVLNSKVCSKLFPAPGNQGFDGCLEHLRLACMAQGKSMTLWDAEYFVFISSRGRVSWSKKSQLLSLSLASLQCLVPALRSWTTGCEGHLPPNAVLRAIQLCCQLGSGDKRSSDDKLPPKALKRIMTFAFGGSARLWRQIA 621          
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Match: A0A484ED46_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ED46_BRELC)

HSP 1 Score: 199 bits (507), Expect = 2.150e-51
Identity = 106/251 (42.23%), Postives = 146/251 (58.17%), Query Frame = 3
Query: 1371 EGRAAAQTRWLDGATGKLFGGSWGGSVRTGASCDTASLELRARVEDAKKGEARGRGAAGEDVAGRGVATVALAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLPALRFLVKNMRSFTVCGGGQTPPKEVARAV--ICSAGWGAKQSLFGPLSAELSRRVMSFVLSGDLATWRSIS 2117
            +GR +AQTRW+D A GK + G W G+VR GA+ D+ SLELR +V  A++                   +  L +W+PN +  D  +WGG +GK CGHNEVV+  LR F P EV+NT+VCSK  PAPGN GFDGCLE L   C  H  ++T+WD   F+ +   G  +   K  +L + L +L+ LV  +RS+T    G+ PP  V RA+   C  G GAK+S  G LS ++ +R+MSF   G    W+ I+
Sbjct:  361 DGRTSAQTRWMDYAEGKRYKGQWLGTVRHGATKDSTSLELRKQVSAAQQTI---------------DPSSFLCQWQPNKEPIDSIQWGGAFGKVCGHNEVVMHELRAFYPQEVLNTKVCSKLFPAPGNQGFDGCLEHLRYACIHHRTSMTLWDAEFFLFLSSNGRVTWSKKHQLLSLSLASLQCLVPALRSWTAACEGRMPPNAVLRAIQLCCQLGSGAKKSSDGKLSLKILKRIMSFEFGGSTRLWQQIA 596          
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Match: G5AIM1_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AIM1_PHYSP)

HSP 1 Score: 200 bits (509), Expect = 2.150e-51
Identity = 104/249 (41.77%), Postives = 141/249 (56.63%), Query Frame = 3
Query: 1377 RAAAQTRWLDGATGKLFGGSWGGSVRTGASCDTASLELRARVEDAKKGEARGRGAAGEDVAGRGVATVALAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQHLRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDDSSFIHVDKAGACSTLPKQAMLHVPLPALRFLVKNMRSFTVCGGGQTPPKEVARAV--ICSAGWGAKQSLFGPLSAELSRRVMSFVLSGDLATWRSIS 2117
            R +AQTRW+D A G+  GG W G+VR GAS D  SL +R ++  A+               GR      L+KW PN +  D +KWGG +GK CGHNEVV+  LR F P EV+N++VCSK  PAPGN GFDGCLE L L C A G+++T+WD   F+ +   G  +   K  +L + L +L+ LV  +RS+T    G  PP  V RA+   C  G G K+S    L  +  +R+++F   G    WR I+
Sbjct:  402 RTSAQTRWMDFAEGRAHGGQWEGAVRHGASKDATSLAVREKLCAAR---------------GRAKDDTFLSKWAPNKEPVDADKWGGAFGKVCGHNEVVMNTLRSFYPQEVLNSKVCSKLFPAPGNQGFDGCLEHLRLACMAQGKSMTLWDAEYFVFISSRGRVTWSKKSQLLSLSLASLQCLVPALRSWTTACEGHMPPSAVLRAIQLCCQLGSGDKRSSDDNLPPKALKRIVTFAFGGSARLWRQIA 635          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10033.54.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWM9_ECTSI0.000e+086.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5D6XHR1_9STRA1.490e-5543.73Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A225VZW7_9STRA3.570e-5443.03Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A067CWH8_SAPPC1.080e-5340.94Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A3R7KVT4_9STRA6.630e-5343.25Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A1V9YH54_9STRA6.890e-5241.20Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S2WIF0_9STRA1.460e-5138.92Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6A3RW30_9STRA1.730e-5142.17Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A484ED46_BRELC2.150e-5142.23Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G5AIM1_PHYSP2.150e-5141.77Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10033contigEcto-sp13_S_contig10033:1273..5577 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1132.9
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FWM9
Model size2331
Hectar predicted targeting categoryother localisation
Exons6
EggNOG OGs28Q49@1,2QWT3@2759
Cds size2196
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10033.54.1prot_Ecto-sp13_S_contig10033.54.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig10033 1305..5474 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462501.8983912-UTR-Ecto-sp13_S_contig10033:1272..13041681462501.8983912-UTR-Ecto-sp13_S_contig10033:1272..1304Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10033 1273..1304 +
1681462501.9764652-UTR-Ecto-sp13_S_contig10033:5474..55771681462501.9764652-UTR-Ecto-sp13_S_contig10033:5474..5577Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig10033 5475..5577 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462501.9097095-CDS-Ecto-sp13_S_contig10033:1304..18651681462501.9097095-CDS-Ecto-sp13_S_contig10033:1304..1865Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10033 1305..1865 +
1681462501.9192145-CDS-Ecto-sp13_S_contig10033:2246..25691681462501.9192145-CDS-Ecto-sp13_S_contig10033:2246..2569Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10033 2247..2569 +
1681462501.9287922-CDS-Ecto-sp13_S_contig10033:2858..29721681462501.9287922-CDS-Ecto-sp13_S_contig10033:2858..2972Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10033 2859..2972 +
1681462501.9382105-CDS-Ecto-sp13_S_contig10033:3546..41831681462501.9382105-CDS-Ecto-sp13_S_contig10033:3546..4183Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10033 3547..4183 +
1681462501.947256-CDS-Ecto-sp13_S_contig10033:4592..49521681462501.947256-CDS-Ecto-sp13_S_contig10033:4592..4952Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10033 4593..4952 +
1681462501.9628303-CDS-Ecto-sp13_S_contig10033:5273..54741681462501.9628303-CDS-Ecto-sp13_S_contig10033:5273..5474Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig10033 5274..5474 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig10033.54.1

>prot_Ecto-sp13_S_contig10033.54.1 ID=prot_Ecto-sp13_S_contig10033.54.1|Name=mRNA_Ecto-sp13_S_contig10033.54.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=732bp
MAKSSKKQCRTPKPSRKGGGLVVVSQRNLHSNSTPQQHPQAKKGKPGKKG
KKKRGLGLADLIAPGDADHSDDFDAPPSSSAVVSTGGVAEYIFSSKHHSL
EQQLYYLLTTRSSELYATSGQQPGQQQQQQQQSGEGGSILDAPTAVEGGC
HALVFVETTAVAQELVGELKALNLVAFAVHDRTPKVQTQEHVKRFLAATS
SERSSVLVLTNSAISRTPPSIGSVKPGHGKLLRVVHFDAPEGKKNAAARA
RVAGGFFRGRGAGAAEEVYLRGGAEAAGLAPFSFDSTAMGGIRSRLAVAK
KLSRAIALSAGEGEERGMQRAAAAAGLEWDEQSSNESGAEATKREKKRAH
AQQAVALRQKVSVLLCQPLLPPLPPPSAALGESGSAAAFTPAPNAHQSAK
ELRKKMVILGMIDGPPQHQAANSGPLAAAAAAAAAAAAGGRRAGAAEGRA
AAQTRWLDGATGKLFGGSWGGSVRTGASCDTASLELRARVEDAKKGEARG
RGAAGEDVAGRGVATVALAKWKPNPDTADPEKWGGKWGKPCGHNEVVLQH
LRPFAPLEVINTRVCSKASPAPGNTGFDGCLELLSLTCRAHGRALTVWDD
SSFIHVDKAGACSTLPKQAMLHVPLPALRFLVKNMRSFTVCGGGQTPPKE
VARAVICSAGWGAKQSLFGPLSAELSRRVMSFVLSGDLATWRSISAGFGV
GVGRQAGGSGQAAPKDTLAFASKKKRKNFNL*
back to top

mRNA from alignment at Ecto-sp13_S_contig10033:1273..5577+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10033.54.1 ID=mRNA_Ecto-sp13_S_contig10033.54.1|Name=mRNA_Ecto-sp13_S_contig10033.54.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4305bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10033:1273..5577+ (Ectocarpus species13 EcNAP12_S_4_19m)
CTGGGACACCATGCCAAATACACCCAAATACCATGGCCAAGTCCAGCAAG AAGCAGTGCCGAACACCCAAACCCTCCAGGAAAGGTGGCGGGTTGGTCGT GGTATCGCAGCGGAATCTCCACTCCAATTCCACGCCGCAACAACATCCTC AAGCCAAGAAGGGCAAACCGGGCAAGAAGGGCAAGAAGAAACGAGGGCTA GGGCTAGCAGACTTGATTGCCCCCGGCGACGCTGATCACAGCGACGACTT CGATGCTCCTCCCTCTTCGTCTGCTGTCGTCAGCACTGGCGGGGTCGCTG AGTACATTTTTTCATCCAAGCACCACTCCCTCGAGCAGCAGCTGTACTAT CTCTTGACGACACGATCATCAGAGCTGTATGCAACATCAGGGCAACAGCC AGGGCAACAGCAGCAGCAGCAGCAGCAGTCCGGCGAGGGTGGGAGTATTC TCGATGCTCCTACCGCCGTAGAAGGGGGGTGCCATGCGCTGGTTTTTGTG GAGACGACCGCCGTTGCACAGGAGCTGGTCGGGGAGCTGAAGGCGCTAAA CCTCGTGGCCTTTGCTGTCCACGACCGCACGCCGAAAGTACAGGTAGACA GGCGACAGCAGACAGCAGTGGTGTGTTGCGCTTGTTGTCGAAATAGCTGC AGCGTGTTTACCCCAGCTCTGGAGATGCAGTACTGATATTGCTGTACCAC CGTCGTGAGCTCACGTAACACTCTTGTAGCAAGGTCAGCAGAGACACGTA CACACATACGAGCCCCCGTGGGTCAGTCAAACCTTACAAACTCCCCGGTT TGGAAGCAGAACAAGGATACCTGTGGAGGACGCGAAGCGATGGCGCACAG TCAAATATGCGCCAACTAAGACGCGCTCGGTACAGCCGTCAAAGGCACGC ACCCCTCGACGCCTACTATATTCTGTTTCGGTGCTCGCCCACCGTCTTTG TCTCGTCGGTCGGCTAAAAAACAGACCCAGGAACATGTCAAGCGTTTCCT GGCGGCGACCTCCTCGGAGAGAAGTTCTGTCCTGGTTCTGACCAACTCGG CGATATCCCGCACGCCGCCGTCCATCGGATCGGTCAAGCCAGGCCACGGG AAACTCCTGAGGGTCGTTCATTTCGACGCGCCAGAGGGCAAAAAGAACGC GGCGGCGAGGGCTCGTGTCGCCGGAGGCTTTTTTCGTGGGCGGGGTGCAG GGGCGGCGGAGGAGGTGTACCTGCGGGGAGGAGCGGAGGCGGCGGGCTTG GCCCCATTTTCGTTCGACAGCACGGCGATGGGGGGCATTCGCTCGAGGTG TAAAAAGGGCCTTTCTGTCCTCACGCCATGCTGTAGTGTGCCGAACGGCT CGGGTGTTTGTGTGGTGAACGTCGACTCCCATCGGCCCTAGCTCTTGCTT CTTGAGCACGGTGGGGAATCGTACGTTTTCGTACCTCTGGCATGGTCCCT GGCGGCACGCTTACGTTGTTATTCACGTTGGCTCATCACCAAAAACCTAT CGCGCGGGTATAAACCTAGTCACGAAGATTTGAGTTCCATGCGGCATCTG GTGACAACTTTCGATTGTGGGGCGTGCGTGCGTCAGGCTCGCCGTTGCCA AGAAGCTGTCGAGGGCGATAGCTTTGAGTGCTGGCGAGGGGGAGGAGAGG GGCATGCAGCGAGCCGCTGCCGCTGCGGGTCTAGAGTGGGATGAGCAGAG GTGAGCGGTGAAACCTGGTGGAAACACAGTCTTGAACTTCTTCTGAATCT ATGGAGAGGGACTGGAGGTGGCCGTGCTCCTCCCGTTTCTTTTGGGATAA GCCGAACAGCACACTCGCATTCCGCCCGTTGTTGTACATCTTCTACGACA CATCCATTGATCGTGATTTGTCACCGGCCTTCAAAGCAATCTCGCATTCA GCGGGAAACATTGCCATGTCTTCATACCCCGGCCGTAGACCATACTTTTG CTTGTTCGGCTGTCTCTGCTGATCCAGATATTCATGATATCACTCCCCCC GTCTGTGTTACATCTCTTCCGTTTAGTTCATTATGGAGGAAGAAATTCGC GTCTGGTTCGATGCCACGTCCTCCGTCCAGAGTAAACTTGAGGAAGACAT TCGCGCCTGGTTTGACATCACCTCCTCAAGTCAATGTTTCGCTAAAGAAC TGAAGCGGTAGTTTTGACACCACTTCTCCGTTCAGTTTTTACCCAGGGAA GAATTTCGCCGCGCCTGGATCACCGATGTTTCGTCGCCCTCCAACCCTCC GTGTCCGTCCTTTTTCAACAACAGCAGCAACGAGAGCGGGGCAGAGGCCA CCAAGCGCGAGAAAAAACGTGCCCACGCGCAGCAGGCGGTCGCCCTCCGA CAAAAGGTTAGCGTGTTACTCTGCCAGCCGCTGCTGCCGCCCCTTCCCCC GCCTTCGGCGGCGCTGGGGGAGAGCGGCTCCGCGGCTGCCTTTACCCCCG CGCCGAACGCACACCAATCCGCTAAGGAACTCCGCAAGAAGATGGTCATC TTGGGCATGATCGACGGACCGCCTCAGCACCAAGCAGCCAACAGCGGGCC GTTAGCTGCTGCTGCTGCTGCTGCCGCTGCTGCTGCTGCCGGAGGAAGAA GGGCGGGGGCGGCCGAGGGCAGAGCTGCCGCACAGACCCGCTGGCTCGAC GGGGCCACCGGGAAGCTCTTCGGCGGGAGCTGGGGCGGCAGCGTCAGGAC GGGAGCCAGCTGCGACACCGCTTCTCTGGAGCTGCGCGCACGAGTTGAGG ACGCCAAGAAGGGGGAGGCGCGGGGGCGAGGTGCCGCTGGAGAAGACGTG GCGGGACGGGGGGTGGCGACGGTAGCGTTGGCCAAGTGGAAACCGAATCC TGACACGGCGGACCCTGAAAAGTGGGGCGGGAAGTGGGGAAAGCCGTGCG GGCACAACGAGGTGCGTGGAGATGGCGTCGGCGTGGGTGGTGTGGTGTGG TTTCGGACTCGGACTGGATTGCGGATGAAAGTCGAGAGATGTGACGGGTG TTTCATTCGCCCTCGGCTGCGAACGAGTGCTAGAGGATGAGTTAAAGATG TGGAGACTTTGGAGCAGCAACGCGTCACACGGACACACAAGAGGCCTGTT GGAAACGGAACCGGTGCACTGACTATACCACGGCATGAATTTTTCGTTGG AAGCATACAAGAAAAGAAAGCAACTTTGACTCGAAAAAGTTGGAATCTGC AGACCCCGAATTCTCCTCTGGTCTCTGCCGTAAAGGAACGCGATTTTTGC CAGTGAGGTCACGTGTAACCAAACCACGCAACGAAAATCCGCCGCCACCA TATCCGTTGATGTCGGGCAGGTGGTGCTACAGCACTTGCGACCGTTCGCA CCGTTGGAAGTGATCAACACCCGTGTGTGCTCGAAGGCCTCGCCCGCCCC GGGCAACACAGGCTTCGACGGCTGCCTGGAGCTGCTCTCTCTGACCTGCC GGGCACACGGGCGGGCTCTCACGGTCTGGGACGACTCATCCTTCATCCAC GTCGACAAGGCCGGGGCGTGCTCCACGCTGCCGAAGCAGGCGATGCTGCA CGTGCCCCTGCCGGCGCTAAGGTTCCTCGTGAAGAACATGAGGAGCTTTA CGGTGTGCGGCGGAGGCCAGACTCCACCGAAAGAGGTCGCAAGGGCGGTT ATCTGCTCGGCGGGGTGGGGGGCCAAGCAGGTGAGGGGCTCGGCGTTTGG TGGACTCGGGGCATCCGTGGAGGGGGTAGGGGTAGGGGTCTGTAGTCCCT CTTTTTGGTAGACGCGGGGTAAGTTGCTTCTCAACCGTCCTCTCCATCTG TGGCGTCGTCAGTCAGCCGTGTACTTGCCACGAGGAAAGTTGGAGAGGTG GTTTGTAGATAATGGGCATGCACACACAAGGAAGTGCTACTCTTGCAGCT GTCGGTCGGGTTGCTTTTTAGTGGTGGCTCATCCTCTTCCGGCCCCCTGC CCCCCCCTTTCATCTTCAAACAATCTTCGCACGGAACCATGCTGTCAACA GTCGCTATTCGGACCCTTATCCGCCGAGCTCTCTAGGCGAGTCATGTCCT TCGTCTTGTCCGGCGATCTAGCGACTTGGAGGTCAATCTCGGCAGGGTTC GGTGTGGGCGTTGGGCGGCAAGCAGGCGGCAGCGGACAGGCGGCGCCCAA AGACACGCTAGCGTTCGCCAGCAAAAAGAAAAGAAAGAACTTCAACCTGT GAAAGTTTCTGCGCGCATGCAGCAGCAGCAGTGCCTGGATTTGGGGTAAA GGGGAAACGGTTCGAAAGTGAAGACGAGGATGACGGCCAACGCATTTGAC GTGTA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10033:1273..5577+

>mRNA_Ecto-sp13_S_contig10033.54.1 ID=mRNA_Ecto-sp13_S_contig10033.54.1|Name=mRNA_Ecto-sp13_S_contig10033.54.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2196bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10033:1273..5577+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCCAAGTCCAGCAAGAAGCAGTGCCGAACACCCAAACCCTCCAGGAA
AGGTGGCGGGTTGGTCGTGGTATCGCAGCGGAATCTCCACTCCAATTCCA
CGCCGCAACAACATCCTCAAGCCAAGAAGGGCAAACCGGGCAAGAAGGGC
AAGAAGAAACGAGGGCTAGGGCTAGCAGACTTGATTGCCCCCGGCGACGC
TGATCACAGCGACGACTTCGATGCTCCTCCCTCTTCGTCTGCTGTCGTCA
GCACTGGCGGGGTCGCTGAGTACATTTTTTCATCCAAGCACCACTCCCTC
GAGCAGCAGCTGTACTATCTCTTGACGACACGATCATCAGAGCTGTATGC
AACATCAGGGCAACAGCCAGGGCAACAGCAGCAGCAGCAGCAGCAGTCCG
GCGAGGGTGGGAGTATTCTCGATGCTCCTACCGCCGTAGAAGGGGGGTGC
CATGCGCTGGTTTTTGTGGAGACGACCGCCGTTGCACAGGAGCTGGTCGG
GGAGCTGAAGGCGCTAAACCTCGTGGCCTTTGCTGTCCACGACCGCACGC
CGAAAGTACAGACCCAGGAACATGTCAAGCGTTTCCTGGCGGCGACCTCC
TCGGAGAGAAGTTCTGTCCTGGTTCTGACCAACTCGGCGATATCCCGCAC
GCCGCCGTCCATCGGATCGGTCAAGCCAGGCCACGGGAAACTCCTGAGGG
TCGTTCATTTCGACGCGCCAGAGGGCAAAAAGAACGCGGCGGCGAGGGCT
CGTGTCGCCGGAGGCTTTTTTCGTGGGCGGGGTGCAGGGGCGGCGGAGGA
GGTGTACCTGCGGGGAGGAGCGGAGGCGGCGGGCTTGGCCCCATTTTCGT
TCGACAGCACGGCGATGGGGGGCATTCGCTCGAGGCTCGCCGTTGCCAAG
AAGCTGTCGAGGGCGATAGCTTTGAGTGCTGGCGAGGGGGAGGAGAGGGG
CATGCAGCGAGCCGCTGCCGCTGCGGGTCTAGAGTGGGATGAGCAGAGCA
GCAACGAGAGCGGGGCAGAGGCCACCAAGCGCGAGAAAAAACGTGCCCAC
GCGCAGCAGGCGGTCGCCCTCCGACAAAAGGTTAGCGTGTTACTCTGCCA
GCCGCTGCTGCCGCCCCTTCCCCCGCCTTCGGCGGCGCTGGGGGAGAGCG
GCTCCGCGGCTGCCTTTACCCCCGCGCCGAACGCACACCAATCCGCTAAG
GAACTCCGCAAGAAGATGGTCATCTTGGGCATGATCGACGGACCGCCTCA
GCACCAAGCAGCCAACAGCGGGCCGTTAGCTGCTGCTGCTGCTGCTGCCG
CTGCTGCTGCTGCCGGAGGAAGAAGGGCGGGGGCGGCCGAGGGCAGAGCT
GCCGCACAGACCCGCTGGCTCGACGGGGCCACCGGGAAGCTCTTCGGCGG
GAGCTGGGGCGGCAGCGTCAGGACGGGAGCCAGCTGCGACACCGCTTCTC
TGGAGCTGCGCGCACGAGTTGAGGACGCCAAGAAGGGGGAGGCGCGGGGG
CGAGGTGCCGCTGGAGAAGACGTGGCGGGACGGGGGGTGGCGACGGTAGC
GTTGGCCAAGTGGAAACCGAATCCTGACACGGCGGACCCTGAAAAGTGGG
GCGGGAAGTGGGGAAAGCCGTGCGGGCACAACGAGGTGGTGCTACAGCAC
TTGCGACCGTTCGCACCGTTGGAAGTGATCAACACCCGTGTGTGCTCGAA
GGCCTCGCCCGCCCCGGGCAACACAGGCTTCGACGGCTGCCTGGAGCTGC
TCTCTCTGACCTGCCGGGCACACGGGCGGGCTCTCACGGTCTGGGACGAC
TCATCCTTCATCCACGTCGACAAGGCCGGGGCGTGCTCCACGCTGCCGAA
GCAGGCGATGCTGCACGTGCCCCTGCCGGCGCTAAGGTTCCTCGTGAAGA
ACATGAGGAGCTTTACGGTGTGCGGCGGAGGCCAGACTCCACCGAAAGAG
GTCGCAAGGGCGGTTATCTGCTCGGCGGGGTGGGGGGCCAAGCAGTCGCT
ATTCGGACCCTTATCCGCCGAGCTCTCTAGGCGAGTCATGTCCTTCGTCT
TGTCCGGCGATCTAGCGACTTGGAGGTCAATCTCGGCAGGGTTCGGTGTG
GGCGTTGGGCGGCAAGCAGGCGGCAGCGGACAGGCGGCGCCCAAAGACAC
GCTAGCGTTCGCCAGCAAAAAGAAAAGAAAGAACTTCAACCTGTGA
back to top