mRNA_Ecto-sp13_S_contig1763.5330.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Match: D7G3Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y8_ECTSI) HSP 1 Score: 647 bits (1670), Expect = 2.590e-232 Identity = 357/398 (89.70%), Postives = 368/398 (92.46%), Query Frame = 1
Query: 1 MPSGSKNKQSASSRDEGTMFVEDSGSRVDATIGSNPVADGQGPATLPSESEQHIRDIVDKITSRNLNHGGGRKATGGAWLLEEDKVLRVIVVRDGEGVWKGKARELNSSMAPLHQKLALKAIARGESPVVYGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSAMALPESMKWSKVASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLKSGNAEISMQTSNLFVQRLKTSANNLDDAKQSKRENAASHKGPRVQSSRTSSSVSSERPKKRAKHHPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTSGPGNTVTQSDTSIHWKKAFLRLWLMEKRFTLHGFLPGARR 1194
MPSGSKNKQS SSRDEGTMFVED SRVDATIGS+PVA+G+GPATLPSESEQHIRDIVDKI SRNLNHGGGRKATGGAWL EEDKVLRVIVVRDGEG WKGKARELNSSMA LHQKL LKA ARGESPVVYGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQS MALPESMKWS +ASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLKSGNAE+SMQTSNLFVQRLK SA NLDDAKQSKR+NAA+HKGPRV+SSRTSSSVS XXXXXXXXXXXXXXXXXXXXXXXXXXXX ++GPG TVTQS TSIHWKKAFLRLWLME+RFTLHGFLP ARR
Sbjct: 1 MPSGSKNKQSLSSRDEGTMFVEDLVSRVDATIGSSPVAEGRGPATLPSESEQHIRDIVDKIASRNLNHGGGRKATGGAWLHEEDKVLRVIVVRDGEGGWKGKARELNSSMAALHQKLTLKATARGESPVVYGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSVMALPESMKWSNIASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLKSGNAEVSMQTSNLFVQRLKASAKNLDDAKQSKRKNAATHKGPRVRSSRTSSSVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNGPGITVTQSGTSIHWKKAFLRLWLMEQRFTLHGFLPRARR 398
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Match: A0A6H5LA90_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA90_9PHAE) HSP 1 Score: 260 bits (664), Expect = 8.990e-74 Identity = 129/219 (58.90%), Postives = 159/219 (72.60%), Query Frame = 1
Query: 130 ATLPSESEQHIRDIVDKITSRNLNHGGGRKATGGAWLLEEDKVLRVIVVRDGEGVWKGKARELNSSMAPLHQKLALKAIARGESPVV-YGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSAMALPESMKWSKVASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLKS 783
A+L +E++ I+ +VD+I SRN N+GGGR+A GG W EED LR IV RDGEG WK KA ELN MA ++ +A A A G+ V YGR AAQCLHRWKKVL+PG+ K HWTP ED + V SA A+ ++KWS VA +PGR+GKQCRERWFNHL PT+KK WT E++VLF+AQ FFG RWCEIS+ + PGRT N +KNR+NSSAR +W S
Sbjct: 197 ASLRTEAD--IQGVVDEIKSRNPNNGGGRQAKGGRWTAEEDNTLRNIVSRDGEGKWKEKAEELNYVMASHYEAMAAVAAAEGDHAVQQYGRAAAQCLHRWKKVLQPGLNKRHWTPEEDEIVRGTVLSAQAIG-AVKWSLVAMLLPGRLGKQCRERWFNHLDPTVKKTEWTPHEDEVLFNAQAFFGTRWCEISKFL-PGRTENAVKNRYNSSARQKWFSS 411
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Match: D8LKF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF8_ECTSI) HSP 1 Score: 259 bits (661), Expect = 2.970e-73 Identity = 128/219 (58.45%), Postives = 160/219 (73.06%), Query Frame = 1
Query: 130 ATLPSESEQHIRDIVDKITSRNLNHGGGRKATGGAWLLEEDKVLRVIVVRDGEGVWKGKARELNSSMAPLHQKLALKAIARGESPVV-YGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSAMALPESMKWSKVASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLKS 783
A+L +E++ I+ +VD+I RN N+GGGR+A GG W EED LR IV RDGEG WK K+ ELN MA ++ +A A A+G+ V YGR AAQCLHRWKKVL+PG+ K HWTP ED + AV SA A+ ++KWS VA +PGR+GKQCRERWFNHL PT+KK WT E++VLF+AQ FFG RWCEIS+ + PGRT N +KNR+NSSAR +W S
Sbjct: 197 ASLRTEAD--IQGVVDEIKKRNPNNGGGRQAKGGRWTAEEDDTLRSIVSRDGEGKWKEKSEELNYVMASHYEAMAAVATAKGDHAVQEYGRVAAQCLHRWKKVLQPGLNKRHWTPEEDEIVRGAVLSAQAIG-AVKWSLVAVLLPGRLGKQCRERWFNHLDPTVKKTEWTPHEDEVLFNAQAFFGTRWCEISKFL-PGRTENAVKNRYNSSARQKWFSS 411
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Match: D7FRA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA0_ECTSI) HSP 1 Score: 181 bits (459), Expect = 9.870e-47 Identity = 93/226 (41.15%), Postives = 127/226 (56.19%), Query Frame = 1
Query: 145 ESEQHIRDIVDKITSRNLNHGGGRKATGGAWLLEEDKVLRVIVVRDGEGVWKGKARELNSSMAPLHQKLALKAIARGESPVVYGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSAMALPESMKWSKVASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLKSGNAEISMQTSNLF 822
ESE+ + +V+K + + GG W EED LR IV G W+ A +L + R+ QCLHRW KVL PG+ KG WT ED+ + + V+ + A + +KWS VAS +PGR+GKQCRERWFNHL P++KK W+ +E+ ++F AQ + G RWCEI++ + PGRT N +KNRFNSSAR +WL S T +L
Sbjct: 67 ESEEWLTSLVEKSKAAGAKGARSKGPKGGKWTKEEDTRLREIVEHHGARNWRMVAEQLGTL-----------------------RSDVQCLHRWNKVLRPGLHKGPWTEEEDSIVRECVEHSGA--QKVKWSVVASRLPGRIGKQCRERWFNHLDPSIKKGEWSPEEDRIVFGAQAYMGNRWCEIAK-LLPGRTENAVKNRFNSSARKKWLDQNPGGASQLTPDLL 266
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Match: A0A7S1GEG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GEG8_9STRA) HSP 1 Score: 163 bits (412), Expect = 8.800e-45 Identity = 83/188 (44.15%), Postives = 106/188 (56.38%), Query Frame = 1
Query: 217 KATGGAWLLEEDKVLRVIVVRDGEGVWKGKARELNSSMAPLHQKLALKAIARGESPVVYGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSAMALPESMKWSKVASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLK 780
+ +GG W ED LRV V G WK A L +GR QCLHRW KVL+PG++KG W ED + D V ++WS +AS +PGR+GKQCRERWFNHL P +KK W +E+ ++F AQ+ G +WCEI+R + PGRT N +KNR+NSSAR RW K
Sbjct: 8 RKSGGNWTAAEDAELRVAVEAHGGRNWKRIAETLG-----------------------HGRTDVQCLHRWNKVLKPGLVKGPWLKEEDDVVRDMVMKYGV--GQVRWSVIASKLPGRIGKQCRERWFNHLDPAIKKGGWMEEEDLLIFQAQREVGNKWCEIAR-MLPGRTENAVKNRWNSSARRRWFK 169
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Match: A0A7S2BQG7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQG7_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.890e-44 Identity = 82/185 (44.32%), Postives = 105/185 (56.76%), Query Frame = 1
Query: 226 GGAWLLEEDKVLRVIVVRDGEGVWKGKARELNSSMAPLHQKLALKAIARGESPVVYGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSAMALPESMKWSKVASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLK 780
GG W EED LRVIV + G W+ A L + R QCLHRW KVL PG+ KG WT ED + D V M +KWS +A+ + GR+GKQCRERWFNHL P + K WT +E+ ++F AQ FG RW +I++ + PGRT N +KNR+NSSAR +WL+
Sbjct: 6 GGKWTKEEDASLRVIVEQHGAKNWRKVAELLGDT-----------------------RTDVQCLHRWNKVLRPGLHKGPWTEEEDGIVRDMV--LMYGAGKVKWSAIAAKLHGRIGKQCRERWFNHLDPNINKGEWTPEEDRIVFEAQNQFGNRWSDIAK-LLPGRTENSVKNRWNSSARKKWLR 164
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Match: A0A835YLN0_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLN0_9STRA) HSP 1 Score: 164 bits (414), Expect = 5.520e-44 Identity = 83/186 (44.62%), Postives = 111/186 (59.68%), Query Frame = 1
Query: 235 WLLEEDKVLRVIVVRDGEGVWKGKARELNSSMAPLHQKLALKAIARGESPVVYGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSAMALPESMKWSKVASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLKSGNA 792
W EED LR +V + G WK A EL +A + P R QCL+RWKK L PG+ KG WT +ED + ++V+ +KWS +A+ +PGR+GKQCRERWFNHL P LK++ WT +E+ V+F AQ G RWCEI++ + PGRT N +KNRFNSSA+ +W+ A
Sbjct: 36 WTSEEDARLRAVVDKHGSRNWKLVADEL------------AQAQPHAQPP----RTDVQCLNRWKKTLRPGLHKGAWTEAEDRVVRESVEECGIA--KVKWSTIAARLPGRIGKQCRERWFNHLDPALKRSTWTPEEDTVIFEAQARLGNRWCEIAK-LLPGRTENAVKNRFNSSAQKKWVSKNGA 202
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Match: A0A836C844_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C844_9STRA) HSP 1 Score: 159 bits (401), Expect = 8.110e-44 Identity = 80/179 (44.69%), Postives = 109/179 (60.89%), Query Frame = 1
Query: 229 GAWLLEEDKVLRVIVVRDGEGVWKGKARELNSSMAPLHQKLALKAIARGESPVVYGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSAMALPESMKWSKVASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSAR 765
G W +ED LR V R G W+ A ++ + R QCLHRW KVL PG+ KG WT +ED + ++V+ A+ + + +KWS VA+ +PGR+GKQCRERWFNHL P +K++PWT +E+ V+F AQ G RWCEI++ + PGRT N +KNRFNSSA+
Sbjct: 2 GTWAPDEDARLRDAVDRHGPRSWRAIAEDVGGA-----------------------RTDMQCLHRWNKVLRPGLHKGPWTETEDRVVRESVE-AVGIAK-VKWSAVAAKLPGRIGKQCRERWFNHLDPAIKRSPWTPEEDTVVFEAQLRLGNRWCEIAK-LLPGRTENAVKNRFNSSAQ 154
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Match: A0A7S2R561_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R561_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.140e-43 Identity = 91/194 (46.91%), Postives = 112/194 (57.73%), Query Frame = 1
Query: 214 RKATGGAWLLEEDKVLRVIVVRDGEGVWKGKARELNSSMAPLHQKLALKAIARGESPVVYGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSAMALPESMKWSKVASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLKSGNAE 795
R GG W EED LR IV + G WK A L PV R+ QCLHRW KVL PG+ KG WT ED + D V + ++KWS +A+ +PGR+GKQCRERWFNHL P++KK WT +E+ VLF AQ G RWCEI++ + PGRT N +KNR+NSSAR RWL+ E
Sbjct: 142 RPPIGGKWSREEDDKLRAIVEQHGAKNWKKVAELLG--------------------PV---RSDVQCLHRWNKVLRPGLHKGPWTEDEDRIVSDMVLAHGV--GNIKWSVIAAELPGRIGKQCRERWFNHLDPSIKKGEWTPEEDKVLFEAQLVVGNRWCEIAK-LLPGRTENAVKNRWNSSARKRWLQENGYE 309
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Match: A0A6U4HUA2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HUA2_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.590e-43 Identity = 94/241 (39.00%), Postives = 131/241 (54.36%), Query Frame = 1
Query: 82 VDATIGSNPVADGQGPATL-PSESEQHIRDIVDKI--TSRNLNHGGGRKATGGAWLLEEDKVLRVIVVRDGEGVWKGKARELNSSMAPLHQKLALKAIARGESPVVYGRNAAQCLHRWKKVLEPGVMKGHWTPSEDAALVDAVQSAMALPESMKWSKVASYIPGRMGKQCRERWFNHLSPTLKKAPWTSQEEDVLFHAQKFFGPRWCEISRCVFPGRTANDIKNRFNSSARGRWLKSGNAE 795
DA P D Q PA + ++ ++ I + ++ T + + + + GG W EED L+ IV G WK A L + R+ QCLHRW KVL+PG+ KG W +ED + D V +KWS +A+ +PGR+GKQCRERWFNHL P++ KAPWT +E+ ++F AQ+ FG RWCEI++ + PGRT N +KNR+NSSAR +W AE
Sbjct: 191 ADAVFQLQP-GDPQRPAGMNDTQWQKRILQLRSQLANTKKGVRLKPRKPSQGGKWSKEEDARLKGIVQEHGAKNWKKIAELLGHT-----------------------RSDVQCLHRWNKVLKPGLHKGPWQAAEDEVVRDMVIRHGV--GKVKWSDIAALLPGRIGKQCRERWFNHLDPSISKAPWTEEEDTIIFEAQQIFGNRWCEIAK-LLPGRTENMVKNRWNSSARKKWFADRKAE 404 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1763.5330.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig1763.5330.1 >prot_Ecto-sp13_S_contig1763.5330.1 ID=prot_Ecto-sp13_S_contig1763.5330.1|Name=mRNA_Ecto-sp13_S_contig1763.5330.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=399bp MPSGSKNKQSASSRDEGTMFVEDSGSRVDATIGSNPVADGQGPATLPSESback to top mRNA from alignment at Ecto-sp13_S_contig1763:8292..12588+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig1763.5330.1 ID=mRNA_Ecto-sp13_S_contig1763.5330.1|Name=mRNA_Ecto-sp13_S_contig1763.5330.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4297bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1763:8292..12588+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig1763:8292..12588+ >mRNA_Ecto-sp13_S_contig1763.5330.1 ID=mRNA_Ecto-sp13_S_contig1763.5330.1|Name=mRNA_Ecto-sp13_S_contig1763.5330.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1197bp|location=Sequence derived from alignment at Ecto-sp13_S_contig1763:8292..12588+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |