mRNA_Ecto-sp13_S_contig17538.5280.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Match: D7FQ27_ECTSI (Chorismate mutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ27_ECTSI) HSP 1 Score: 444 bits (1142), Expect = 5.440e-154 Identity = 247/283 (87.28%), Postives = 251/283 (88.69%), Query Frame = 1
Query: 1 MSFYTMSPAVVRRTAFPSSAVVPSAGTAGAAAGGGVTGIAAERQDMLGVSGVDVLQPESSEDLEEEPLPPFSPDIAALNNSASNAINGRRTNRLRAAGANKDRAAAATAAATTAGARNRQPTRSLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRRDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 849
MSFYTMSPAVVRRT FP++ VVPSAG AGAAAGGGVTGIAA RQDMLGV+GVDVLQPESSEDLEEEP SPDIAALNNS SNA NG RTNR+R TA ARNRQPTRSLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNR DAADIYGRDASFLEYML ETEKLHATVRRY SLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK
Sbjct: 1 MSFYTMSPAVVRRTGFPTT-VVPSAGAAGAAAGGGVTGIAAGRQDMLGVNGVDVLQPESSEDLEEEPSSSLSPDIAALNNSGSNANNGGRTNRVRXXXXXXXXXXXXXXXX-TADARNRQPTRSLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRSDAADIYGRDASFLEYMLSETEKLHATVRRYMSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 281
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Match: A0A4D9CWZ2_9STRA (Chorismate mutase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWZ2_9STRA) HSP 1 Score: 192 bits (488), Expect = 1.110e-56 Identity = 99/160 (61.88%), Postives = 122/160 (76.25%), Query Frame = 1
Query: 370 SLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRRDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 849
SL+S+R +LIRQE++IIFALIER QFR N AIY +++ + + SFLEY+L ETEKLH VRRYTS EE AFFP LP+PIL PL FP LLAPN V+VN QIL Y++E+VP +C+ GDD+QHGSSV+ D+ LQALSRR+HLGKFVAE+K
Sbjct: 2 SLDSIRSTLIRQEDSIIFALIERAQFRQNQAIYAKGILQLDPSIPDYPFLKTLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPDPILTPLQFPALLAPNTVDVNAQILHLYINEVVPAVCKEGDDEQHGSSVLADITLLQALSRRIHLGKFVAETK 161
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Match: A0A836CAA2_9STRA (Chorismate mutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAA2_9STRA) HSP 1 Score: 186 bits (473), Expect = 5.040e-55 Identity = 86/122 (70.49%), Postives = 106/122 (86.89%), Query Frame = 1
Query: 484 RVNRRDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 849
R++R+ + ++ RDA+F+EY+LCETEK+HA VRRY S EEL FFP FLP P+LPPLDFP++LAPN VN+ND +LKRYV+E+VP IC GDD+QHGSSV+CD+NALQALSRRVH GKFVAESK
Sbjct: 2 RLHRQGSNTVFDRDATFVEYVLCETEKVHARVRRYMSPEELPFFPGFLPAPLLPPLDFPQILAPNSVNINDTLLKRYVAEVVPAICGAGDDEQHGSSVLCDINALQALSRRVHFGKFVAESK 123
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Match: W7U1H9_9STRA (Chorismate mutase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1H9_9STRA) HSP 1 Score: 192 bits (488), Expect = 8.620e-55 Identity = 99/160 (61.88%), Postives = 122/160 (76.25%), Query Frame = 1
Query: 370 SLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRRDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 849
SL+S+R +LIRQE++IIFALIER QFR N AIY +++ + + SFLEY+L ETEKLH VRRYTS EE AFFP LP+PIL PL FP LLAPN V+VN QIL Y++E+VP +C+ GDD+QHGSSV+ D+ LQALSRR+HLGKFVAE+K
Sbjct: 168 SLDSIRSTLIRQEDSIIFALIERAQFRQNQAIYAKGILQLDPSIPDYPFLKTLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPDPILTPLQFPALLAPNTVDVNAQILHLYINEVVPAVCKEGDDEQHGSSVLADITLLQALSRRIHLGKFVAETK 327
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Match: A0A6U1P8R8_9STRA (Chorismate mutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P8R8_9STRA) HSP 1 Score: 174 bits (442), Expect = 1.050e-48 Identity = 95/161 (59.01%), Postives = 113/161 (70.19%), Query Frame = 1
Query: 370 SLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRRDAADIYGR-DASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 849
SL S+R +LIRQEETIIFA+IER Q+ NN Y +++ R ASFLEY L ETEKLHA VRRYTS EE FF +P PILP L+FP LL P+ VN+N ILKRYV E+VP IC GDD+Q+GS+ + D+ ALQALSRR+H G FVAESK
Sbjct: 106 SLNSIRRTLIRQEETIIFAMIERAQYLQNNRNYESGPYKLIPEGLDGAKERTQASFLEYFLFETEKLHARVRRYTSPEEYPFFADMIPPPILPLLNFPHLLQPHSVNLNHVILKRYVDEVVPRICSAGDDEQYGSTALADITALQALSRRIHYGLFVAESK 266
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Match: A0A7S2SIA4_9STRA (Chorismate mutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIA4_9STRA) HSP 1 Score: 173 bits (438), Expect = 1.340e-48 Identity = 93/163 (57.06%), Postives = 116/163 (71.17%), Query Frame = 1
Query: 370 SLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRRDAAD--IYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLP-EPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 849
SL SVR SLIRQEETIIFALIER QF N IY +R + + D I + SFL +ML ETEKLHA RRY S EE FFP L +P+L PLD+P ++ D+N+ND+I+ Y+ ++VP IC+PGDD Q+GSS +CD+ LQALSRR+H+GKFVAESK
Sbjct: 28 SLASVRKSLIRQEETIIFALIERAQFVQNQRIY-ERGAQAWSSEEVDPWICDKQGSFLNFMLLETEKLHARARRYMSPEEHPFFPQVLDIDPVLAPLDYPPVVISQDININDEIMSLYIDKVVPSICDPGDDQQYGSSALCDIACLQALSRRIHIGKFVAESK 189
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Match: A0A8H7ELG1_9FUNG (Chorismate mutase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7ELG1_9FUNG) HSP 1 Score: 169 bits (429), Expect = 4.630e-48 Identity = 90/160 (56.25%), Postives = 112/160 (70.00%), Query Frame = 1
Query: 370 SLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRRDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 849
SL +R +LIR E+TIIFALIER QF N IYT + + SFLEY L ETEK+HA VRRYTS +E AF LPEPILPPLD+ + L PND+NVND+I++ Y++ IVP+IC+ GDD+ +GSS D+ LQALSRR+H GKF+AESK
Sbjct: 11 SLGKLRSTLIRLEDTIIFALIERAQFSSNECIYTPGALQFKGATG------ERSFLEYFLWETEKVHAKVRRYTSPDEYAFTSP-LPEPILPPLDYKQFLFPNDINVNDKIIEMYINSIVPVICQAGDDENYGSSATKDIECLQALSRRIHYGKFIAESK 163
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Match: R1DRS1_EMIHU (Chorismate mutase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRS1_EMIHU) HSP 1 Score: 173 bits (439), Expect = 1.950e-47 Identity = 95/160 (59.38%), Postives = 114/160 (71.25%), Query Frame = 1
Query: 370 SLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRRDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 849
SL+S+R +LIRQE+TIIFALIER Q+R N+ Y R A I G SFLE ML ETE++HA VRRYTS +E AFFP LP P LP LDFP LL P VN+N QIL+ Y+ +++P + +PGDD QHGSSVV DV LQA+S+RVH G FVAESK
Sbjct: 12 SLQSIRETLIRQEDTIIFALIERAQYRANDVCYQPGA-----RAFAAIAGPSESFLESMLLETERMHARVRRYTSPDEHAFFPRALPPPSLPLLDFPALLHPCSVNLNPQILEVYLHKVLPAVTQPGDDTQHGSSVVADVAVLQAISKRVHYGLFVAESK 166
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Match: M2X1P6_GALSU (Chorismate mutase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X1P6_GALSU) HSP 1 Score: 170 bits (430), Expect = 2.240e-47 Identity = 88/159 (55.35%), Postives = 110/159 (69.18%), Query Frame = 1
Query: 373 LESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRRDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 849
LE +R LIRQEE+IIFAL+ER QF N+ IY R +I G SF E++LCE EK +A VRRYTS +E AFFP LPEPILPPL FP + PN +N+N +I YV +IVP+ICE GDD +GSS + DV LQA+S+R+H GKF+AE+K
Sbjct: 84 LEDLRERLIRQEESIIFALVERAQFMTNDVIY--------RPGGIEIPGFSGSFTEFLLCELEKGYALVRRYTSPDEQAFFPDILPEPILPPLSFPETIVPNTINLNSKIYDVYVQDIVPVICEAGDDQNYGSSAMYDVACLQAISKRIHYGKFIAEAK 234
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Match: A0A1X2HVL1_SYNRA (Chorismate mutase n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HVL1_SYNRA) HSP 1 Score: 166 bits (421), Expect = 8.160e-47 Identity = 90/160 (56.25%), Postives = 106/160 (66.25%), Query Frame = 1
Query: 370 SLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRRDAADIYGRDASFLEYMLCETEKLHATVRRYTSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESK 849
+L+ +R +L+R E+TIIF LIER QF N IYT N D SFLEY L ETEK+HA VRRY S +E AF LPEPILPPL++P L PND+NVN QI+K Y IVP+ICE DD +GSS D+ LQALSRR+H GKFVAESK
Sbjct: 11 TLDKIRNTLVRLEDTIIFGLIERAQFALNKCIYTSGALEFNGATG------DRSFLEYFLWETEKVHAKVRRYQSPDEYAFTSP-LPEPILPPLEYPSFLHPNDINVNAQIMKVYTESIVPVICEDRDDSNYGSSATRDIECLQALSRRIHYGKFVAESK 163 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17538.5280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17538.5280.1 >prot_Ecto-sp13_S_contig17538.5280.1 ID=prot_Ecto-sp13_S_contig17538.5280.1|Name=mRNA_Ecto-sp13_S_contig17538.5280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=283bp MSFYTMSPAVVRRTAFPSSAVVPSAGTAGAAAGGGVTGIAAERQDMLGVSback to top mRNA from alignment at Ecto-sp13_S_contig17538:1..1653- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17538.5280.1 ID=mRNA_Ecto-sp13_S_contig17538.5280.1|Name=mRNA_Ecto-sp13_S_contig17538.5280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1653bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17538:1..1653- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17538:1..1653- >mRNA_Ecto-sp13_S_contig17538.5280.1 ID=mRNA_Ecto-sp13_S_contig17538.5280.1|Name=mRNA_Ecto-sp13_S_contig17538.5280.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17538:1..1653- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |