mRNA_Ecto-sp13_S_contig17465.5235.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE) HSP 1 Score: 361 bits (926), Expect = 2.210e-123 Identity = 173/181 (95.58%), Postives = 177/181 (97.79%), Query Frame = 1
Query: 1 DGQAAFEELCNNYDRVTDEVIRAKMEELENNHMNPGENPDDYFNQKHLLRTQLEKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKRWKGRIAGRGFAMATTASDIVCHSCYEPGHIRRNCPKTKNRTKKKTKPAGATKWCSKHNTTSHSDEECYRQ 543
DGQAAFEELCNNYDRVTDEVIRAKMEELENN MNPGENPD+YFNQKHLLRTQL+KMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRK WKGRIAGRGFAMATTASDI+CHSCYEPGHIRRNCPK KNR KKKTKPAGATKWCSKHNTTSHSDEECY+Q
Sbjct: 114 DGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDNYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 294
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE) HSP 1 Score: 360 bits (924), Expect = 9.140e-119 Identity = 173/181 (95.58%), Postives = 176/181 (97.24%), Query Frame = 1
Query: 1 DGQAAFEELCNNYDRVTDEVIRAKMEELENNHMNPGENPDDYFNQKHLLRTQLEKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKRWKGRIAGRGFAMATTASDIVCHSCYEPGHIRRNCPKTKNRTKKKTKPAGATKWCSKHNTTSHSDEECYRQ 543
DGQAAFEELCNNYDRVTDEVIRAKMEELENN MNPGENPDDYFNQKHLLRTQL+KMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDM STMRNIFLDEQSRK WKGRIAGRGFAMATTASDI+CHSCYEPGHIRRNCPK KNR KKKTKPAGATKWCSKHNTTSHSDEECY+Q
Sbjct: 132 DGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 312
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE) HSP 1 Score: 332 bits (850), Expect = 1.260e-111 Identity = 161/182 (88.46%), Postives = 169/182 (92.86%), Query Frame = 1
Query: 1 DGQAAFEELCNNYDRVTDEVIRAKMEELENNHMNPGENPDDYFNQKHLLRTQLEKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNI-FLDEQSRKRWKGRIAGRGFAMATTASDIVCHSCYEPGHIRRNCPKTKNRTKKKTKPAGATKWCSKHNTTSHSDEECYRQ 543
DGQAAFEELCNNYDRVTDEVIRAKMEELENN MNPGENPDDYFNQKHL+R QL+KMGEPISDRR KDI VQGFSDEY+DVKLMVFRDPTFN L MQST+RN + +EQSRK WKGRIAGRGFAMATTASDI+CHSCYEPGHIRRNCPK KNR KKKTKPAGATKWC KHNTTSHSDEECY+Q
Sbjct: 72 DGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLIRAQLDKMGEPISDRRCKDIWVQGFSDEYRDVKLMVFRDPTFNALGMQSTIRNTSWTNEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCCKHNTTSHSDEECYQQ 253
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE) HSP 1 Score: 348 bits (893), Expect = 1.520e-110 Identity = 168/181 (92.82%), Postives = 172/181 (95.03%), Query Frame = 1
Query: 1 DGQAAFEELCNNYDRVTDEVIRAKMEELENNHMNPGENPDDYFNQKHLLRTQLEKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKRWKGRIAGRGFAMATTASDIVCHSCYEPGHIRRNCPKTKNRTKKKTKPAGATKWCSKHNTTSHSDEECYRQ 543
DGQAAFEELCNNYDRVTDEVIRAKMEELENN MNPGENPDDYFNQKHLLRTQL+KMGEP SDRR KDI VQGFSDEYKDVK+M FRDPTFNVLDMQSTMRNIFLDEQS KRWKGRIAGRGFAMATTASDI+CH CYEPGHIRRNCPK KNR KKKTKPAGATKWCSKHNTTSHSDEECY+Q
Sbjct: 125 DGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPNSDRRVKDIFVQGFSDEYKDVKVMAFRDPTFNVLDMQSTMRNIFLDEQSCKRWKGRIAGRGFAMATTASDIICHRCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 305
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Match: A0A6H5K0G3_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G3_9PHAE) HSP 1 Score: 340 bits (873), Expect = 2.640e-108 Identity = 165/181 (91.16%), Postives = 170/181 (93.92%), Query Frame = 1
Query: 1 DGQAAFEELCNNYDRVTDEVIRAKMEELENNHMNPGENPDDYFNQKHLLRTQLEKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKRWKGRIAGRGFAMATTASDIVCHSCYEPGHIRRNCPKTKNRTKKKTKPAGATKWCSKHNTTSHSDEECYRQ 543
DGQAA EELCNNYDRVTDEVIRAKMEELENN MNPGE+PDDY NQKHLLRTQL+ MGEPISDRRFKDICVQG SDE+KDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRK WKG IAGRGFAMATTASDI+CHSCYEPGHIRRNCP KNR KKKTKPAGAT WCSKHNTTSHSDEECY+Q
Sbjct: 50 DGQAACEELCNNYDRVTDEVIRAKMEELENNPMNPGEDPDDYCNQKHLLRTQLDTMGEPISDRRFKDICVQGISDEHKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKGWKGCIAGRGFAMATTASDIICHSCYEPGHIRRNCPMIKNRAKKKTKPAGATTWCSKHNTTSHSDEECYQQ 230
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Match: A0A6H5KZM5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM5_9PHAE) HSP 1 Score: 316 bits (809), Expect = 2.350e-106 Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 1
Query: 73 MEELENNHMNPGENPDDYFNQKHLLRTQLEKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKRWKGRIAGRGFAMATTASDIVCHSCYEPGHIRRNCPKTKNRTKKKTKPAGATKWCSKHNTTSHSDEECYRQ 543
MEELENN MNPGENPDDYFNQKHLLRTQL+KMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRK WKGRIAGRGFAMATTASDI+CHSCYEPGHIRRNCPK KNR KKKTKPAGATKWCSKHNTTSHSDEECY+Q
Sbjct: 1 MEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKEWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 157
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Match: A0A6H5K8X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X5_9PHAE) HSP 1 Score: 324 bits (831), Expect = 1.360e-104 Identity = 157/181 (86.74%), Postives = 164/181 (90.61%), Query Frame = 1
Query: 1 DGQAAFEELCNNYDRVTDEVIRAKMEELENNHMNPGENPDDYFNQKHLLRTQLEKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKRWKGRIAGRGFAMATTASDIVCHSCYEPGHIRRNCPKTKNRTKKKTKPAGATKWCSKHNTTSHSDEECYRQ 543
DGQAAFEELCNNYDRVTDEVIRAKMEELEN MNPGENPDDYFNQKHLLR L+KMGEPISDRRFK+ICVQGFSDEYK KLMV RDPTFN LDMQSTMRNIF DEQSRK WKGRI GR FA A+TASDI+CHSCYEPGHIRRNCPK KNR KK+TKPAGATK CSKHNTT HSD+ECY+Q
Sbjct: 114 DGQAAFEELCNNYDRVTDEVIRAKMEELENKPMNPGENPDDYFNQKHLLRAHLDKMGEPISDRRFKNICVQGFSDEYKGFKLMVVRDPTFNALDMQSTMRNIFSDEQSRKGWKGRIGGREFATASTASDIICHSCYEPGHIRRNCPKFKNRAKKRTKPAGATKRCSKHNTTFHSDKECYQQ 294
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Match: A0A6H5K783_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K783_9PHAE) HSP 1 Score: 302 bits (773), Expect = 6.190e-102 Identity = 146/166 (87.95%), Postives = 153/166 (92.17%), Query Frame = 1
Query: 46 VTDEVIRAKMEELENNHMNPGENPDDYFNQKHLLRTQLEKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKRWKGRIAGRGFAMATTASDIVCHSCYEPGHIRRNCPKTKNRTKKKTKPAGATKWCSKHNTTSHSDEECYRQ 543
+T + RAKMEELEN+ MNPGENPDD FNQKHLLR QL+K+GEPIS RRFKDICVQGFSDE KDVKLMVFRDPTFNVLDMQSTMRNIFLDEQS K WKGRIAGRGFAMATTASDI+CHSCYEPGHIRRNCPK KNR KKKTKPAGATKWC KHNTTSHSDEECY+Q
Sbjct: 1 MTGKRTRAKMEELENSPMNPGENPDDNFNQKHLLRAQLDKIGEPISGRRFKDICVQGFSDEDKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSHKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCFKHNTTSHSDEECYQQ 166
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Match: A0A6H5K9Y0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Y0_9PHAE) HSP 1 Score: 323 bits (827), Expect = 4.630e-101 Identity = 164/204 (80.39%), Postives = 167/204 (81.86%), Query Frame = 1
Query: 1 DGQAAFEELCNNYDRVTDEVIRAKMEELENNHMNPGENPDDYFNQKH-----------------------LLRTQLEKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKRWKGRIAGRGFAMATTASDIVCHSCYEPGHIRRNCPKTKNRTKKKTKPAGATKWCSKHNTTSHSDEECYRQ 543
DGQAAFEELCN YDRVTDE IRAKMEELENN MNPGENPDD LLRTQL+KMGEPISDRRFKDICVQGFSDEY DVKLMVFR PTFNVLDMQSTMRNIFLDEQSRK WKGRIAGRGFAMATTASDI+CHSCYEPGHIRRNCPK KNR KKKTKPAGATKWCSKHNTTSHSDEECY+Q
Sbjct: 94 DGQAAFEELCNKYDRVTDEDIRAKMEELENNPMNPGENPDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRTQLDKMGEPISDRRFKDICVQGFSDEYNDVKLMVFRYPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 297
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Match: A0A6H5JLQ5_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ5_9PHAE) HSP 1 Score: 297 bits (760), Expect = 1.350e-100 Identity = 141/151 (93.38%), Postives = 146/151 (96.69%), Query Frame = 1
Query: 1 DGQAAFEELCNNYDRVTDEVIRAKMEELENNHMNPGENPDDYFNQKHLLRTQLEKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKRWKGRIAGRGFAMATTASDIVCHSCYEPGHIRRNCPKTKNR 453
DGQAAFEELCNNYDRVTDEVIRAKMEELENN MNPGENPDDYFNQKHLLRTQL+KMGEPISDRRFKDICVQGFSDEYKDVKL+V RDPTFNVLDMQSTMRNIFLDEQSRK WKGRIAGRGF+M TTAS+I+CHSCYEPGHIRRNCPK KNR
Sbjct: 47 DGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLIVLRDPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFSMVTTASEIICHSCYEPGHIRRNCPKIKNR 197 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17465.5235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17465.5235.1 >prot_Ecto-sp13_S_contig17465.5235.1 ID=prot_Ecto-sp13_S_contig17465.5235.1|Name=mRNA_Ecto-sp13_S_contig17465.5235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=181bp DGQAAFEELCNNYDRVTDEVIRAKMEELENNHMNPGENPDDYFNQKHLLRback to top mRNA from alignment at Ecto-sp13_S_contig17465:2896..3438- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17465.5235.1 ID=mRNA_Ecto-sp13_S_contig17465.5235.1|Name=mRNA_Ecto-sp13_S_contig17465.5235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17465:2896..3438- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17465:2896..3438- >mRNA_Ecto-sp13_S_contig17465.5235.1 ID=mRNA_Ecto-sp13_S_contig17465.5235.1|Name=mRNA_Ecto-sp13_S_contig17465.5235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=543bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17465:2896..3438- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |