mRNA_Ecto-sp13_S_contig17429.5219.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI) HSP 1 Score: 378 bits (970), Expect = 3.990e-131 Identity = 181/187 (96.79%), Postives = 185/187 (98.93%), Query Frame = 1
Query: 1 YSGGQFGEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALSAEQYGDSLMCGACVEETASGSGSGNNPIPSTFKAFITDRCPECQKGDLDFSMSGDGRWDIEWKFIACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDVAAWSGAQTVVTTTVSGVTETAEVS 561
YSGGQ+GEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVAL+AEQYGDSLMCGACVE TASGSGSGNNPIPSTFKAFITD+CPECQKGDLDFSMSGDGRWDIEWKF+ACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHND AAWSGAQTVVTTTVSGVTETAEVS
Sbjct: 99 YSGGQYGEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVS 285
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE) HSP 1 Score: 235 bits (599), Expect = 7.820e-72 Identity = 114/187 (60.96%), Postives = 133/187 (71.12%), Query Frame = 1
Query: 4 SGGQFGEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALSAEQYGDSLMCGACVEETASGSGSGNNPIPSTFKAFITDRCPECQKGDLDFSMSGDGRWDIEWKFIACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEV-HNDVAAWSGAQTVVTTTVSGVTETAEVS 561
SGG +G + G+GTYY +AG C FFDD P +Y GM PVAL+A QYGDSLMCG+CVE +G G G+NPI TFK FI D+CPEC +GDLDF DGRWDIEW+F+ACPGEE SF PYYWK+QPRGT TPV SLT+ G++A RT DNHFE+ H W Q VVTTTV GV E E+S
Sbjct: 344 SGGVYGTTFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMS 529
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI) HSP 1 Score: 231 bits (590), Expect = 7.290e-71 Identity = 114/188 (60.64%), Postives = 135/188 (71.81%), Query Frame = 1
Query: 4 SGGQFGEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALSAEQYGDSLMCGACVEETASGSGSGNNPIPSTFKAFITDRCPECQKGDLDFSMSGDGRWDIEWKFIACP-GEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEV-HNDVAAWSGAQTVVTTTVSGVTETAEVS 561
SGG++G ++GEGTYY T+AG C FFDD P +YDGM PVAL+ QYGDSLMCGACVE +G GSG++P+ TFK FI D+CPEC +GDLDF DGRWDI+WKF+ CP GEE SF YYWK+QPRGT TPV SLT+ G++A RT DNHFE+ H W Q VVTTTV GV E E+S
Sbjct: 307 SGGEYGITFNGEGTYYTGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYEPQMVVTTTVGGVVEETEMS 493
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR) HSP 1 Score: 180 bits (457), Expect = 2.800e-53 Identity = 82/152 (53.95%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 28 YSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALSAEQYGDSLMCGACVEETASGSGSGNNPIPSTFKAFITDRCPECQKGDLDFSMSGDGRWDIEWKFIACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHN 483
+ GEGTYYG+TT G C+ +P MY+GM+PVA++ QY +S CGAC++ T G GSG NPI TFKA++ DRCPEC+ GD+D S GDGRW + WKFI CPGE F+ +N YY K+QPRG TPV +L+V GQ +T DN + V N
Sbjct: 29 FHGEGTYYGYTTRGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQN 180
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI) HSP 1 Score: 177 bits (450), Expect = 4.780e-53 Identity = 87/175 (49.71%), Postives = 113/175 (64.57%), Query Frame = 1
Query: 16 FGEEYSGEGTYYGHTTAG--MCSFFDDVPEMYDGMIPVALSAEQYGDSLMCGACVEETASGSGSGNNPIPSTFKAFITDRCPECQKGDLDFSMSGDGRWDIEWKFIACPG-EETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDVAAWSGAQTVVTTTV 531
+ E++SG+ TYYG T G C+ +PEMYDGMIPVAL+ EQY DS MCGAC+E G G G +P+ FKA++TDRCPEC GDLDF+ GDGRWDI W F+ C G + +F+ +N +YWK+QPRG +PV L ++G A R+ DN F + + G Q V T TV
Sbjct: 37 YDEQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEG--GPFDGEQEVHTKTV 209
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Match: A0A7S4IRK7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IRK7_9EUKA) HSP 1 Score: 130 bits (328), Expect = 3.890e-33 Identity = 72/184 (39.13%), Postives = 106/184 (57.61%), Query Frame = 1
Query: 16 FGEEYSGEGTYYGHTTAGMCSFFDDVP---EMYDGMIPVALSAEQYGDSLMCGACVEETASGSGSGNNPIPSTFKAFITDRCPECQKGDLDFSMSGDGRWDIEWKFIACPGE--ETSFVSPSANPYYWKVQPRGTTTPVVSLTV---DGQS--AMRTTDNHFEVHNDVAAWSGAQTVVTTTVSG 537
F SGEGTYYG +++G C+ ++P + + VA+++ QY SL CG C++ T G GSG +PI TF +++D CPEC GDLD + SGDGRW+IEW + CPG + ++ +N ++ KVQ R PV L + DGQS M T ++F + ++ SG+ TV +V G
Sbjct: 15 FSTPQSGEGTYYGPSSSGSCTLDFNLPPVAQTSEIFSTVAMNSPQYYGSLTCGMCIQMTGEGVGSGADPIDGTFIVYVSDLCPECASGDLDVAQSGDGRWEIEWTAVDCPGNYGDLQYLGQGSNDFFLKVQVRNHRVPVSQLYLLDADGQSRITMTPTSDNFFTYQSSSSLSGSYTVQVESVDG 198
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Match: A0A1S3HSP2_LINUN (uncharacterized protein LOC106157840 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HSP2_LINUN) HSP 1 Score: 102 bits (255), Expect = 1.550e-23 Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 1
Query: 22 EEYSGEGTYYGHT------TAGMCSFFDDVPEMYDGMIPVALSAEQYGDSLMCGACVEETASGSGSGNNPIPSTFKAFITDRCPECQKGDLDFSMSGDGRWDIEWKFIACP-GEETSFVSPSANPYYWKVQPRGTTTPVVSLTV-DGQSA-----MRTTDNHF 471
+ + GEGTYYG + T + S Y A++ EQ+ SL CG C+ T SG G G NP+ T+ ++TD CP C++GD+DF++ GDGRW+I++ + CP + S+ ++P+Y K+Q T PV + + +G S MRT D +
Sbjct: 32 KRFFGEGTYYGQSYNQAKETCQLRSMLPGKLSDYGIDSTAAINIEQFTGSLTCGICLRVTGSGQGLGLNPLTGTYLVYVTDLCPSCKQGDVDFALVGDGRWNIDFTAVPCPFNDNVSYRFQDSSPWYIKIQVGNTRLPVTGMALYNGASKEYVPMMRTNDGFW 194
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Match: A0A210QW07_MIZYE (Expansin-YoaJ n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QW07_MIZYE) HSP 1 Score: 99.8 bits (247), Expect = 2.100e-22 Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 1
Query: 28 YSGEGTYYGHTTAGMCSFFDDVPEM----YDGMIP--VALSAEQYGDSLMCGACVEETASGSGSGNNPIPSTFKAFITDRCPECQKGDLDFSMSGDGRWDIEWKFIACPGEETS--FVSPSANPYYWKVQPRGTTTPVVSLTV 432
++G+GTYY +T G CS+ PE+ Y I VAL++ Q+ S CG C SG G G NPI F+ D CPEC+KGD+DFS + DGRW+I + I CP TS + +N YY K+Q R P S V
Sbjct: 29 FTGDGTYYWNTEGGTCSY--PPPELPPVAYHPNITDLVALNSHQFFGSHACGMCFSVNGSGVGLGLNPIIGQHIVFVKDMCPECKKGDVDFSETADGRWNISIRAIQCPVGNTSIEYKFQGSNEYYLKLQVRNARIPATSFEV 169
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Match: A0A6B3NL91_9CYAN (Uncharacterized protein (Fragment) n=1 Tax=Symploca sp. SIO1C4 TaxID=2607765 RepID=A0A6B3NL91_9CYAN) HSP 1 Score: 80.5 bits (197), Expect = 2.880e-14 Identity = 56/151 (37.09%), Postives = 73/151 (48.34%), Query Frame = 1
Query: 19 GEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALSAEQYGDSLMCGACVEETASGSGSGNNPIPSTFKAFITDRCPECQKGDLDFSMSG--------DGRWDIEWKFIACPGEETSFVSP-------SANPYYWKVQPRGTTTPVVSL 426
G+ YSGEGT+YG T AG CSF + P + + A++A QY S CGA VE + +G P+ ITD CPECQ GD+D S DGR I W + + SP +NPY+ VQ R TP+ S+
Sbjct: 370 GKTYSGEGTFYGATGAGHCSF-NATP---NNRMVAAMNAVQYNKSQACGAYVEVSGPKQEAGAEPVV----VRITDECPECQPGDIDLSTEAFKLIANPVDGRVPISWNLV-----NPNLTSPIIYHFKEGSNPYWTAVQIRNHNTPIASV 507
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Match: A0A6B3M816_9CYAN (Endoglucanase n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A6B3M816_9CYAN) HSP 1 Score: 77.4 bits (189), Expect = 3.600e-13 Identity = 57/148 (38.51%), Postives = 76/148 (51.35%), Query Frame = 1
Query: 19 GEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALSAEQYGDSLMCGACVEETASGSGSGNNPIPSTFKAFITDRCPECQKGDLD-----FSMSGD---GRWDIEWKFI----ACPGEETSFVSPSANPYYWKVQPRGTTTPVVSL 426
G+ YSGEGT+YG T AG CSF D P ++ M+ A++A QY S CGA VE + +G +P+ ITD CPEC+ GD+D F + D GR I W + A P T +NPY+ VQ R P+ S+
Sbjct: 370 GKTYSGEGTFYGATGAGHCSF-DATP--HNRMV-AAMNAVQYNKSQACGAYVEVSGPKQEAGADPVV----VRITDECPECEPGDIDLSTEAFKLIADPVAGRVPISWNLVNPNLAAP--ITYHFKEGSNPYWTAVQIRNHNAPIASV 507 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17429.5219.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17429.5219.1 >prot_Ecto-sp13_S_contig17429.5219.1 ID=prot_Ecto-sp13_S_contig17429.5219.1|Name=mRNA_Ecto-sp13_S_contig17429.5219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=189bp YSGGQFGEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALSAEQYGDback to top mRNA from alignment at Ecto-sp13_S_contig17429:2629..3687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17429.5219.1 ID=mRNA_Ecto-sp13_S_contig17429.5219.1|Name=mRNA_Ecto-sp13_S_contig17429.5219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1059bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17429:2629..3687- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17429:2629..3687- >mRNA_Ecto-sp13_S_contig17429.5219.1 ID=mRNA_Ecto-sp13_S_contig17429.5219.1|Name=mRNA_Ecto-sp13_S_contig17429.5219.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=567bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17429:2629..3687- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |