mRNA_Ecto-sp13_S_contig17367.5186.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig17367.5186.1
Unique NamemRNA_Ecto-sp13_S_contig17367.5186.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Match: D7G471_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G471_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 4.340e-173
Identity = 236/248 (95.16%), Postives = 240/248 (96.77%), Query Frame = 1
Query:    1 QPGADTDVDRLKLALAESVYRSTKREPLGKGYQREHLLPPKVKSDAFTFGVSSDKSEAAKSLLYPHPSAVDMEESGTRCGPGEQRRRGYIWDVDIENHRFGRPGSFASPLCLDSGSEPSRLVSNKLDDFRETQDTVGRANNLGHDPRNQLGKHVYGKEAVKRGPNEWDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAIAEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQVGNPSSPRNQG 744
            QPGADTDV+RLKLALAESVYRSTKREPLGKGYQR H LPPKVKSDAFTFGVSSDKSEAAKSLLYPHPSAVDMEESG RCGPGEQRRRGYIWDVDIENHRFGRPGS ASPLCLDSGSEPSRLVS KLDDFRETQDT+GRA NLGHDPR +LGKHVYGKEAVKRGPNEWDARSC+EGNYSWAEQQPDNDLGKSITPGFRNAIAEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQVG PSSPRNQG
Sbjct:   83 QPGADTDVNRLKLALAESVYRSTKREPLGKGYQRGHQLPPKVKSDAFTFGVSSDKSEAAKSLLYPHPSAVDMEESGARCGPGEQRRRGYIWDVDIENHRFGRPGSLASPLCLDSGSEPSRLVSKKLDDFRETQDTIGRAKNLGHDPRKKLGKHVYGKEAVKRGPNEWDARSCVEGNYSWAEQQPDNDLGKSITPGFRNAIAEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQVGIPSSPRNQG 330          
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Match: A0A7S2G5T3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5T3_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.820e-62
Identity = 117/253 (46.25%), Postives = 154/253 (60.87%), Query Frame = 1
Query:    4 PGADTDVDRLKLALAESVYRSTKREPLGKGYQREHLLPPKVKSDAFTFGVSSDKS-EAAKSLLYPHPSAVDME------ESGTRCGPGEQRRRGYIWDVDIENHRFGRPGSFASPLCLDSGS----------EPSRLVSNKLDDFRETQDTVGRANNLGHDPRNQLGKHVYGKEAVKRGPNE--WDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAIAEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSA 705
            PG D++  + K +  E++Y STK+EPLG+ Y R H+LP K   + F FG +S  S EAAK LLYP  +  D +      +S     PGEQ++R Y W +D+  H+FG      S   ++  S          EP R+ S K +DF+ T D +GR  NLGH  + +    VYGK ++   PN   WDARSC+EG+Y++ EQ PD DLGKS TPGFRN  AE RAFGVP++RSDI  YA RS+AD QNYGDD +A
Sbjct:  103 PGMDSEYSQAKYSQKEALYHSTKQEPLGRSYVRGHVLPGKTTENDFKFGKASVSSTEAAKPLLYPTVTEDDQQYKAQYIKSHKSYAPGEQKQRDYNWKIDMGTHKFGV--GVGSQTAMNGASFGVTGAMAQCEPPRITSKKTEDFKNTHDQLGRVRNLGHGSK-ESHPGVYGKASL---PNSKVWDARSCIEGDYTYDEQAPDADLGKSHTPGFRNITAESRAFGVPTVRSDIPKYATRSIADNQNYGDDVNA 349          
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Match: A0A7S2XTI8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTI8_9STRA)

HSP 1 Score: 208 bits (530), Expect = 2.270e-61
Identity = 114/268 (42.54%), Postives = 152/268 (56.72%), Query Frame = 1
Query:    1 QPGADTDVDRLKLALAESVYRSTKREPLGKGYQREHLLP-PKVKSDAFTFGVSSDKSEAAKSLLYPHPSAVDM--------EESGTRCGPGEQRRRGYIWD-VDIENHRFGRPG----------SFASPLCLDSGSEPSRLVSNKLDDFRETQDTVGRANNLGHDPRNQLGKHVYGKEAVKRGPNEWDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAIAEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQVGNPSSPRNQG 744
            Q G  ++   +K  +AE  Y   KREPLG  Y R+   P P      F +G+ +  SE AKSLLYP      +        + S     PGEQ++RGY W     ++  FGR G          S A  L  ++   P R+ + K++D++   DT+GRA NLGH PR       YG+  +  G +EWDA++C+EG+YS  EQ PD DLGKSITPGFRN   E RAFGVPS+R+DI PYA++S+AD+QNYGDD +AR +  P    N G
Sbjct:   91 QQGTMSEYQEIKHEMAEKTYYRAKREPLGASYVRDQKEPHPNATDPKFRYGIPTKSSEDAKSLLYPDEKVAALSYLNKDQYKRSHNAFEPGEQKQRGYNWGGTSAQDRVFGRSGGVLPLNGVSTSIAEALRCEADEPPKRITAKKVEDYKGMHDTLGRAKNLGHGPRGVDPNFRYGQSTL--GSDEWDAKACIEGDYSVPEQMPDRDLGKSITPGFRNVSTETRAFGVPSVRTDIPPYAKKSIADSQNYGDDVNARYLVQPGDFSNMG 356          
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Match: F0YA47_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YA47_AURAN)

HSP 1 Score: 187 bits (475), Expect = 2.100e-53
Identity = 111/266 (41.73%), Postives = 155/266 (58.27%), Query Frame = 1
Query:    1 QPGADTDVDRLKLALAESVYRSTKREPLGKGYQREHLLPPKVKSDAFTFGVSS--DKSEAAKSLLYPHPSAVDMEE------SGTRCGPGEQRRRGYIWDV-DIENHRFG-RPGS--------FASPLCLDSGSEPSRLVSNKLDDFRETQDTVGRANNLGHD---PRNQLGKHVYGKEAVKRGPNEWDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAIAEG---RAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQVGNPS 726
            QPGA+++  ++KL   ES Y S KREPLG+ + R H+LP  V    F FG  S  +  + +K L+Y   +AV   E      S     PGEQR RGY W   D+  HRFG   GS          +   L  G +   + S ++ +F   QD +G+  NLGH    PR+    H+YGK +V RG  EWDAR C+ G+Y+  +++PD+DLGK+ TPGFRN + +    R FG P++RSDI  YA+RS+AD QNYGDD++A+++  PS
Sbjct:   87 QPGAESEFAQVKLTQKESTYHSIKREPLGQSFTRGHVLPSCVAEPGFQFGKKSVREGGDGSKVLIYNPSAAVTAAEKQQYIKSHGSFEPGEQRTRGYDWGGRDMNAHRFGVGDGSHVALNGLALGASAALRQGMDTEPITSTRVQNFNSLQDKLGKTRNLGHGNHRPRD----HLYGKASV-RGFGEWDARCCITGDYAEEDREPDSDLGKTHTPGFRNILTDAQKERTFGTPTVRSDIPKYAKRSIADHQNYGDDANAQELLYPS 347          
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Match: A0A7S4E3N5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3N5_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.050e-52
Identity = 109/264 (41.29%), Postives = 160/264 (60.61%), Query Frame = 1
Query:    1 QPGADTDVDRLKLALAESVYRSTKREPLGKGYQREHLLPPKVKSDAFTFGVSS--DKSEAAKSLLY-PHPSAVDME-----ESGTRCGPGEQRRRGYIWD-VDIENHRFGRP-GSFASPLCLDSGS-------EPSRLVSNKLDDFRETQDTVGRANNLGHDPRNQLGK-HVYGKEAVKRGPNEWDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAIAE---GRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQVGNPSS 729
            QPGA+++  + KL  AE  Y ST+ EPLGK +   H+LP + ++    FG S+       +K+L+Y P    V  E     +S    GPGEQR R Y W   D++ HRFG   GS+ +   L  G+       +P  ++S ++ +F+  QD +G++  LGH    Q GK H YGK++V RG  EWDAR C+ G+Y+  + +P+ +LGK++TPG+RN + E   GR FGVPS+R+DI  YA RSVAD+QNYGDD + +++  PS+
Sbjct:   98 QPGAESEYAQTKLTQAERHYHSTRMEPLGKCFSHGHVLPEECRTREHKFGKSTITPGGNDSKTLIYMPSAKPVPGERAQYIKSHGSYGPGEQRSRDYDWKGCDLKTHRFGEGVGSYVALNGLALGATAAMEQLDPQPIISQRMRNFKALQDKLGQSRYLGHTGAYQFGKMHRYGKKSV-RGEGEWDARQCIAGDYAPEDCEPEPELGKTLTPGYRNILTEKSRGRTFGVPSVRTDIPKYAVRSVADSQNYGDDPTGKELLYPSA 360          
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Match: A0A5D6XQL5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQL5_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.720e-45
Identity = 97/252 (38.49%), Postives = 138/252 (54.76%), Query Frame = 1
Query:   16 TDVDRLKLALAESVYRSTKREPLGKGYQREHLLPPKVKSDAFTFGVSSDKSEAAKSLLYPHPSAVDMEE------SGTRCGPGEQRRRGYIWD---VDIENHRFGRPGS------FASPLCL----DSGSEPSRLVSNKLDDFRETQDTVGRANNLGHDPRNQLGKHVYGKEAVKRGPNEWDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAIAEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQV 714
            TD  R+ LA +E+ Y S KREPLGK Y R H+LP  ++   F FGVS    ++A+ LLYP  +  + ++      S     PGEQ+ R Y W+   +D    RFG   +        +  CL    D   +   + + +++D R T D +G+A +LG    N    H++G    K     WD   C++G+YS  EQQPD DLG+    G++NA  E R+FGVPSIR DI   ++RS+AD QNYGDDS A+ +
Sbjct:   93 TDYQRIALAKSEANYASHKREPLGKSYTRGHVLPANMQKPEFAFGVSGTFGDSARELLYPSTTLNNKQDEELYKRSHGSVAPGEQKNREYRWEAAKIDPGRFRFGVKTNAVGAEGLGASACLNPEMDETQQRPGVTAKQVEDMRSTYDQLGKARHLGASSSNLPPDHIFGAPLKKDPGCAWD---CIQGSYSADEQQPDADLGRPANYGWKNASTETRSFGVPSIRVDIPAPSRRSIADAQNYGDDSRAKDL 341          
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Match: A0A2D4CD04_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD04_PYTIN)

HSP 1 Score: 166 bits (420), Expect = 4.700e-45
Identity = 101/258 (39.15%), Postives = 150/258 (58.14%), Query Frame = 1
Query:    7 GADTDVDRLKLALAESVYRSTKREPLGKGYQREHLLPPKVKSDAFTFGVSSDKSEAAKSLLYPHPSAVDMEE------SGTRCGPGEQRRRGYIWD----VDIENHRFG----RPGS--FASPLCL-----DSGSEPSRLVSNKLDDFRETQDTVGRANNLGHDPRNQLGK-HVYGKEAVKRGPNEWDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAIAEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQV 714
            GA T+  R+     E+ Y S KREPLG  Y R H+LP  ++   F FG+S    ++A+ LLYP  S  + ++      S     PGEQ  R Y W+    VD    RFG     PG+    +  CL     D+ ++P+ +V+ +++D R T D +GR  +LG      L   HV+G   VK    +  AR+C++G+YS  EQQPD DLG++++ G++NA  E R+FGVP++RSDI   A+RS+AD QNYGDD+S++++
Sbjct:   89 GATTEYQRINQQKLEANYASHKREPLGVSYSRGHVLPAHMQRPEFAFGISGTFGDSARELLYPSTSFNNKQDEELYKRSHGAVAPGEQVNRQYKWEQTRIVDPTRFRFGVKTISPGTDGVGAAACLNPEMDDAVAKPA-IVAKQVEDQRSTTDQLGRVRHLGASSALTLPPDHVFG---VKLSKGDESARACIQGHYSEDEQQPDRDLGRAVSFGWKNATPESRSFGVPTVRSDIPAPARRSIADGQNYGDDASSKEL 342          
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Match: K3WNW0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNW0_GLOUD)

HSP 1 Score: 165 bits (417), Expect = 1.190e-44
Identity = 97/252 (38.49%), Postives = 147/252 (58.33%), Query Frame = 1
Query:   16 TDVDRLKLALAESVYRSTKREPLGKGYQREHLLPPKVKSDAFTFGVSSDKSEAAKSLLYPHPSAVDMEE------SGTRCGPGEQRRRGYIWD---VDIENHRFG-RPGSFA-----SPLCL----DSGSEPSRLVSNKLDDFRETQDTVGRANNLGHDPRNQLGKHVYGKEAVKRGPNEWDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAIAEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQV 714
            T+  R+ LA +E+ Y S KRE LGK Y R H+LP  ++   + FG+S    ++A+ LLYP     + ++      S     PGEQ+ R Y WD   +D + +RFG + G+       +  CL    D     S + + +++D R T D +G+  +LG    N    HV+G    K   + WD   C++G+YS+ EQQP+ DLG+++  G++N+ AE RAFGVPSIRSDI   ++RS+AD QNYGDDS+A+++
Sbjct:   93 TEYQRIALARSEANYASQKREVLGKSYSRGHVLPANMQKPDYAFGISGTFGDSARELLYPSTLFNNKQDEELYKRSHGSVAPGEQKNRDYHWDAAKIDPKKYRFGVKTGAIGIEGLGASACLNPEMDDTLPRSVITAKQVEDMRSTFDYLGKPRHLGASS-NLPPDHVFGAPLKKDTESTWD---CIQGHYSYDEQQPNADLGRAVNYGWKNSSAETRAFGVPSIRSDIPLPSKRSIADGQNYGDDSNAKEL 340          
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Match: A0A662X632_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X632_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.430e-44
Identity = 106/257 (41.25%), Postives = 143/257 (55.64%), Query Frame = 1
Query:    7 GADTDVDRLKLALAESVYRSTKREPLGKGYQREHLLPPKVKSDAFTFGVSSDKSEAAKSLLYP--HPSAVDMEE-------SGTRCGPGEQRRRGYIWD---VDIENHRFG-RP-------GSFA---SPLCLDSGSEPSRLVSNKLDDFRETQDTVGRANNLGHDPRNQL-GKHVYGKEAVKRGPNEWDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAIAEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSA 705
            G  T+  RL LA  E+ Y S KREPLGK Y R H+LP +++   F FG+     E+AK LLYP      ++ EE       S     PGEQ+ RGY W+   +D   HRFG +P       G  A   +P   +S + P  + S +L+D R   D +G+  +LG    + L   HV+G    +   + W    C++G YS  EQQPD DLG+++  G+RNA  + RAFGVP+IRSDI   A+RSVAD QNYGDD +A
Sbjct:   69 GPATEYQRLTLAKHEANYASHKREPLGKSYSRGHVLPTRMQQPEFVFGMGGTFCESAKELLYPSTRDGLLNSEENQALYKRSHGSVAPGEQKNRGYRWEAASIDPAKHRFGVKPVGIGAEGGEVAVILNPEMDESVAAPG-VASRQLEDRRSLYDHLGKPRHLGSAATDTLPSSHVFGV-TTQDSDSAW---QCIQGEYSADEQQPDADLGRAVNHGWRNATCDKRAFGVPTIRSDIPAPARRSVADGQNYGDDPNA 320          
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Match: A0A8K1CIL5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIL5_PYTOL)

HSP 1 Score: 162 bits (410), Expect = 1.150e-43
Identity = 98/272 (36.03%), Postives = 144/272 (52.94%), Query Frame = 1
Query:   16 TDVDRLKLALAESVYRSTKREPLGKGYQREHLLPPKVKSDAFTFGVSSDKSEAAKSLLYPHPSAVDMEE------SGTRCGPGEQRRRGYIWD---VDIENHRFG------RPGSFASPLCL----DSGSEPSRLVSNKLDDFRETQDTVGRANNLGHDPRNQLGKHVYGKEAVKRGPNEWDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAIAEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQVGNPSSPRNQGRQLSLRYVHR 774
            T+  R++   +ES Y S KREPLG+ Y R H LP  +    + FG+S    E+AK LLYP  +  + ++      S     PGEQ+ R Y WD   +D   +RFG            +  CL    D  +    +   ++++ R T D +G+  ++     N    HV+G   VK   ++  AR C++G Y+  EQQPD DLG+ ++ G+ N   E R+FGVPSIRSDI   ++RS+AD QNYGDDSS++++  P    + G Q S   V R
Sbjct:   90 TEYQRMQQQRSESTYASLKREPLGRSYSRGHTLPAHMTKPEYAFGISGTFGESAKELLYPSTTLNNKQDDELYKRSHGAVAPGEQKNRQYQWDNAKIDPAKYRFGVKTISLGSDGLGAATCLRPEIDENANKPVVTVKQVEEMRSTYDQLGKPRHVSAAATNLPSDHVFG---VKLSKDDETARGCIQGYYTEDEQQPDADLGRPVSYGWHNVTPETRSFGVPSIRSDIPMPSRRSIADCQNYGDDSSSKELLYPEEFASSGIQDSEFAVPR 358          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17367.5186.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G471_ECTSI4.340e-17395.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2G5T3_9STRA1.820e-6246.25Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2XTI8_9STRA2.270e-6142.54Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YA47_AURAN2.100e-5341.73Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4E3N5_9STRA2.050e-5241.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A5D6XQL5_9STRA1.720e-4538.49Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4CD04_PYTIN4.700e-4539.15Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3WNW0_GLOUD1.190e-4438.49Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A662X632_9STRA2.430e-4441.25Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A8K1CIL5_PYTOL1.150e-4336.03Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17367contigEcto-sp13_S_contig17367:320..2142 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score492.7
Seed ortholog evalue1.1e-136
Seed eggNOG ortholog2880.D7G471
Preferred nameEFHB
Model size795
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs2CJU2@1,2QV2M@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-02_001500.1
Cds size795
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462906.102064-CDS-Ecto-sp13_S_contig17367:319..6581681462906.102064-CDS-Ecto-sp13_S_contig17367:319..658Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17367 320..658 -
1681462906.1128218-CDS-Ecto-sp13_S_contig17367:861..10981681462906.1128218-CDS-Ecto-sp13_S_contig17367:861..1098Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17367 862..1098 -
1681462906.1231673-CDS-Ecto-sp13_S_contig17367:1672..17681681462906.1231673-CDS-Ecto-sp13_S_contig17367:1672..1768Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17367 1673..1768 -
1681462906.133269-CDS-Ecto-sp13_S_contig17367:2019..21421681462906.133269-CDS-Ecto-sp13_S_contig17367:2019..2142Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig17367 2020..2142 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17367.5186.1prot_Ecto-sp13_S_contig17367.5186.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig17367 320..2142 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig17367.5186.1

>prot_Ecto-sp13_S_contig17367.5186.1 ID=prot_Ecto-sp13_S_contig17367.5186.1|Name=mRNA_Ecto-sp13_S_contig17367.5186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=265bp
QPGADTDVDRLKLALAESVYRSTKREPLGKGYQREHLLPPKVKSDAFTFG
VSSDKSEAAKSLLYPHPSAVDMEESGTRCGPGEQRRRGYIWDVDIENHRF
GRPGSFASPLCLDSGSEPSRLVSNKLDDFRETQDTVGRANNLGHDPRNQL
GKHVYGKEAVKRGPNEWDARSCMEGNYSWAEQQPDNDLGKSITPGFRNAI
AEGRAFGVPSIRSDIQPYAQRSVADTQNYGDDSSARQVGNPSSPRNQGRQ
LSLRYVHRSPHPPN*
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mRNA from alignment at Ecto-sp13_S_contig17367:320..2142-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig17367.5186.1 ID=mRNA_Ecto-sp13_S_contig17367.5186.1|Name=mRNA_Ecto-sp13_S_contig17367.5186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1823bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17367:320..2142- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCCCGGTGCGGACACGGACGTAGATCGGCTAAAGCTCGCACTCGCCGA GTCTGTGTATCGCAGCACCAAGCGAGAACCTTTAGGCAAGGGCTACCAAA GAGAACATCTGCTACCACCGAAGGTACGACGTCCATGCCTGTTTTTTCAG CAAGTCGTTCCGCGGTTGTACGAGTTGATTGTGCGTTTTATGCACTCCCT GTCCATGCCAGTTTATTTATTGGTGCGGACTCGCGTTCAACTCAAGTGTA GGCGGCATTGTCAGTTTGAAGCGTGTCTCCTGGAATGAAAGATTTCCTTC TCGGTGACCCAATTTTAAAGAGGTTAAAACTCGCAGTGCACATTCAACAC CCACCACCGTTGCCCCTGAAACAGGTCAAAAGCGATGCGTTCACGTTCGG GGTTTCCTCAGACAAGAGTGAGGCGGCCAAGTCTTTGCTGTACCCACACC CATCAGCCGTGGACATGGAGGTATATCAATGTAATCCCCAAAGCGTAGCC GCTGGGGTTGACAAGGTAGAGGGGCAAATGAGCTAGCATGTGGTACCCTT TGTATCGCATACCACTGACCACAACAGGTAGTGATAGATCAGTCAAGCGT AACCTTGATTCTTCGCGGGACGTCTTGGGGTGCTGGAAGTTGGTTGTCCT CCGTATCACGTTGTTACATTCTTAACCTCGCTGCATTCCGCCATGATGGG GCGGAGGAAGGGGTGTCAGTCATGCTCCATCCAGGAGAACTCGAGATTGC GGGGACCTTAGGGTCGACACGAGAGGAACCGACAACGAACCCGTTTGCGC GGTCAGCATTCTACTAAAGACATGATCATCTGTGTCGACTACAGTTTAGG ACTCCTCTTGTAGTTCGATGATCCAGTTGCCTTCATGCATGAGGAGAACG AATGCCCACAGCCCTCGAGATATAACCAAACAGCCACCACAACGACGGCT TCAAGGCGACAGAAAGTGTGTGTTTTGTGAAGTCCTGCCCTGTCTTGGGA TTAACACTATCACCCTTCTTGCCACATGGACACCTCGCAACAAGGAAAGC GGCACTCGATGTGGACCCGGGGAACAACGTCGGCGCGGTTACATCTGGGA CGTGGATATCGAGAACCATCGATTTGGCCGTCCTGGAAGTTTCGCGTCTC CTCTTTGTCTGGACAGTGGAAGTGAACCCAGCAGGCTCGTGTCGAATAAG CTAGACGACTTCAGGGAGACGCAGGATACTGTTGGACGTGCCAACAACCT CGGCCATGACCCTCGGAACCAGCTTGGGAAGGTATTTCGAGTATCCGAAC AGCAGAGCTAAGCTCTCGACTCTGTCGTACTGTCATGAACTGATTTTGCG AAGAGTTTAACCTTGGTGCCCTTAACTTTTTCTGGTGCAATATCTCTTTG CCGGCTTTATTTCGCACTAAGCTTCTACCAGTCTATAGGGCAAAAACCCA GCATTGTGATGTGCTGTGATGTTTGGCGACGCAGCATGTGTACGGCAAAG AAGCGGTCAAGCGCGGGCCAAACGAATGGGATGCGAGAAGCTGCATGGAA GGCAACTACAGCTGGGCAGAACAACAACCAGACAACGACCTTGGCAAGTC TATTACGCCTGGTTTCCGCAACGCTATTGCAGAAGGGCGAGCATTTGGGG TTCCAAGCATCCGCTCGGACATCCAGCCTTATGCACAGCGCTCGGTTGCT GATACTCAGAACTACGGAGACGACTCCAGTGCCAGGCAAGTCGGAAATCC TTCTTCACCACGAAATCAAGGTCGGCAGCTTTCACTACGCTACGTCCATC GCTCCCCGCACCCCCCGAATTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17367:320..2142-

>mRNA_Ecto-sp13_S_contig17367.5186.1 ID=mRNA_Ecto-sp13_S_contig17367.5186.1|Name=mRNA_Ecto-sp13_S_contig17367.5186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=795bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17367:320..2142- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCCCGGTGCGGACACGGACGTAGATCGGCTAAAGCTCGCACTCGCCGA
GTCTGTGTATCGCAGCACCAAGCGAGAACCTTTAGGCAAGGGCTACCAAA
GAGAACATCTGCTACCACCGAAGGTCAAAAGCGATGCGTTCACGTTCGGG
GTTTCCTCAGACAAGAGTGAGGCGGCCAAGTCTTTGCTGTACCCACACCC
ATCAGCCGTGGACATGGAGGAAAGCGGCACTCGATGTGGACCCGGGGAAC
AACGTCGGCGCGGTTACATCTGGGACGTGGATATCGAGAACCATCGATTT
GGCCGTCCTGGAAGTTTCGCGTCTCCTCTTTGTCTGGACAGTGGAAGTGA
ACCCAGCAGGCTCGTGTCGAATAAGCTAGACGACTTCAGGGAGACGCAGG
ATACTGTTGGACGTGCCAACAACCTCGGCCATGACCCTCGGAACCAGCTT
GGGAAGCATGTGTACGGCAAAGAAGCGGTCAAGCGCGGGCCAAACGAATG
GGATGCGAGAAGCTGCATGGAAGGCAACTACAGCTGGGCAGAACAACAAC
CAGACAACGACCTTGGCAAGTCTATTACGCCTGGTTTCCGCAACGCTATT
GCAGAAGGGCGAGCATTTGGGGTTCCAAGCATCCGCTCGGACATCCAGCC
TTATGCACAGCGCTCGGTTGCTGATACTCAGAACTACGGAGACGACTCCA
GTGCCAGGCAAGTCGGAAATCCTTCTTCACCACGAAATCAAGGTCGGCAG
CTTTCACTACGCTACGTCCATCGCTCCCCGCACCCCCCGAATTAG
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