prot_Ecto-sp13_S_contig1734.5177.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1734.5177.1
Unique Name	prot_Ecto-sp13_S_contig1734.5177.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	873

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1734.5177.1 vs. uniprot
Match: A0A6H5JNX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX8_9PHAE)

HSP 1 Score: 1570 bits (4064), Expect = 0.000e+0
Identity = 780/808 (96.53%), Postives = 793/808 (98.14%), Query Frame = 0

Query:   66 MWRLSQPASPDCGTSDRTEFEEALAAARSALEGRSWGALQSYETASIRPPAPDGAIESRQEKVANGPRISGLEGWGANKNLSFAGSFATIYTAADKNPLFLNPNSQEAINLVAGLKRSLGSSEASRAETTRSAEDEDGRAAIVTCLESVRFTNEDLRSLCMPYVVGLWRACSGPAVVLRHLLPVVFATGTRAIYECLAYVCRLTVRLESLTEDEKEGFEASEEFLISRSEMYSGVDEGVLTGYTCFLLNFIVEDVIGDSVSGPGPCFCGGLAGAVGWWPASWDRIPLGHVLSVMSLATGSDLYEQEGTLVYRYKFFKVRAVLSIDATSGTSAVPGHLVSAVLKFRNLASLIRGSWVSYPPFKAMKEGMVRRERYVGWVASGRGKTRISMTGGYTPTPRGQGGGVPAAGRPGRAPSWGGAWSAVGSRETVFSPGTPARGIGQKWTDVAGLSTPVAEHIVTAGRVVARGIWAAGSALSDFGRSTAEAARAVGGILSAYEVASVNRDVSNGPVALTFDVGKDSNAAREVWQSTQPASYDRGWGTWDWTSTDILAYWEANWGVFSLCLRLHGPDTAWGRTIRAVFDLTTAFDALPKDFLDRVLKLAWAARPSNDGLQEMISRNSTETISPYPRTQTPRAVMTTGQYKDLCKGDNGAGVRCLGLMLVQAALVPDGNSEVSPRGQCFAPDALCHIKGVVTGLARGGGPIMLGAMLAKKLGWGFRTASFSESGREGHAFMVTFPERTGYGNGRGLTFYCRRKGWGRCGHVLRPPVWTGPTEAEKAIYSAGGDSRPLVHYGIPDES-QEAPGSRLV 872
            MWRLS PASPDCGTSDRTEFEEALAAARSALEGRSWGALQSYETASIR PAPDGAIESRQEKVANGPRISGLEGWGANKNLSFAGSFATIYTAADKNPLFLNPNSQEAINLVAGLKRSLGSS+ASRAETTRSAE+EDGRAAIVTCLESVRFTNEDLRSLCMPYVVGLWRACSGPAVVLRHLLPVVFATGTRAIYEC AYVCRLTVRLESLTE EKEGFEASEEFLISRS MYSGVDEGVLTGYTCFLLNFIVEDVIGD VSGPGPCFCGGLAGAVGWWPASWDRIPLGHVLSVMSLATGSDLYEQ+G LVYRYKFFKVRAVLSIDATSGT AVPGHLVSAVLKFRNLASLIRGSWVSYPPFKAMKEGMVRRERYVGWVASGRG TRISMTGGYTP PRGQGGGVPAAGRPGRAPSWG  WSAV SR+TVFSPGTPARGIGQKWTDVAGLSTPVAEHIVTAGRVVARGIWAAGSALSDFGRSTAEAARAVGGILSAYEVASVNRDVSNGP+ALTF+VGKDSNAAREVWQSTQPASYDRGWGTWDWTSTDILAYWEANWGVFSLCLRLHGPDTAWGRTIRAV+DLTT FDALPKDFLDRVLKLAWAARPS+DGLQEMISRNST+TISPYPRTQTPR+VMTTGQYKDLCKGDNGAGVRCLGLMLVQAALVPDGNSEVSPRG+CFAPDALCH+KGVVTGLARGGGPIMLGAMLAKKLGWGFRTASFSESGREGHAFMVTFPERTGYGNGRGLTFYCRRKGWGRCGHVLRPPVWTGPTEAEKAIYSAGGDSRPLVHYGIPDES +EAPGSRLV
Sbjct:    1 MWRLSHPASPDCGTSDRTEFEEALAAARSALEGRSWGALQSYETASIRLPAPDGAIESRQEKVANGPRISGLEGWGANKNLSFAGSFATIYTAADKNPLFLNPNSQEAINLVAGLKRSLGSSDASRAETTRSAENEDGRAAIVTCLESVRFTNEDLRSLCMPYVVGLWRACSGPAVVLRHLLPVVFATGTRAIYECFAYVCRLTVRLESLTEGEKEGFEASEEFLISRSGMYSGVDEGVLTGYTCFLLNFIVEDVIGDRVSGPGPCFCGGLAGAVGWWPASWDRIPLGHVLSVMSLATGSDLYEQDGALVYRYKFFKVRAVLSIDATSGTRAVPGHLVSAVLKFRNLASLIRGSWVSYPPFKAMKEGMVRRERYVGWVASGRGNTRISMTGGYTPAPRGQGGGVPAAGRPGRAPSWGDDWSAVDSRDTVFSPGTPARGIGQKWTDVAGLSTPVAEHIVTAGRVVARGIWAAGSALSDFGRSTAEAARAVGGILSAYEVASVNRDVSNGPLALTFNVGKDSNAAREVWQSTQPASYDRGWGTWDWTSTDILAYWEANWGVFSLCLRLHGPDTAWGRTIRAVYDLTTGFDALPKDFLDRVLKLAWAARPSSDGLQEMISRNSTKTISPYPRTQTPRSVMTTGQYKDLCKGDNGAGVRCLGLMLVQAALVPDGNSEVSPRGKCFAPDALCHVKGVVTGLARGGGPIMLGAMLAKKLGWGFRTASFSESGREGHAFMVTFPERTGYGNGRGLTFYCRRKGWGRCGHVLRPPVWTGPTEAEKAIYSAGGDSRPLVHYGIPDESREEAPGSRLV 808

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1734.5177.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1734.5177.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JNX8_9PHAE	0.000e+0	96.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 871..872
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 21..872
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1734	contig	Ecto-sp13_S_contig1734:229..9767 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1734.5177.1	mRNA_Ecto-sp13_S_contig1734.5177.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1734 45..11066 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1734.5177.1 ID=prot_Ecto-sp13_S_contig1734.5177.1|Name=mRNA_Ecto-sp13_S_contig1734.5177.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=873bp
MNPLTEFFFTTCFAFSGAASEIANHQRGTLRELPQGLGQPRHRHDRSVVG
NGLGQPLGRRHCQQTMWRLSQPASPDCGTSDRTEFEEALAAARSALEGRS
WGALQSYETASIRPPAPDGAIESRQEKVANGPRISGLEGWGANKNLSFAG
SFATIYTAADKNPLFLNPNSQEAINLVAGLKRSLGSSEASRAETTRSAED
EDGRAAIVTCLESVRFTNEDLRSLCMPYVVGLWRACSGPAVVLRHLLPVV
FATGTRAIYECLAYVCRLTVRLESLTEDEKEGFEASEEFLISRSEMYSGV
DEGVLTGYTCFLLNFIVEDVIGDSVSGPGPCFCGGLAGAVGWWPASWDRI
PLGHVLSVMSLATGSDLYEQEGTLVYRYKFFKVRAVLSIDATSGTSAVPG
HLVSAVLKFRNLASLIRGSWVSYPPFKAMKEGMVRRERYVGWVASGRGKT
RISMTGGYTPTPRGQGGGVPAAGRPGRAPSWGGAWSAVGSRETVFSPGTP
ARGIGQKWTDVAGLSTPVAEHIVTAGRVVARGIWAAGSALSDFGRSTAEA
ARAVGGILSAYEVASVNRDVSNGPVALTFDVGKDSNAAREVWQSTQPASY
DRGWGTWDWTSTDILAYWEANWGVFSLCLRLHGPDTAWGRTIRAVFDLTT
AFDALPKDFLDRVLKLAWAARPSNDGLQEMISRNSTETISPYPRTQTPRA
VMTTGQYKDLCKGDNGAGVRCLGLMLVQAALVPDGNSEVSPRGQCFAPDA
LCHIKGVVTGLARGGGPIMLGAMLAKKLGWGFRTASFSESGREGHAFMVT
FPERTGYGNGRGLTFYCRRKGWGRCGHVLRPPVWTGPTEAEKAIYSAGGD
SRPLVHYGIPDESQEAPGSRLV*