mRNA_Ecto-sp13_S_contig173.5160.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig173.5160.1
Unique NamemRNA_Ecto-sp13_S_contig173.5160.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: D7G8H5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8H5_ECTSI)

HSP 1 Score: 1142 bits (2953), Expect = 0.000e+0
Identity = 568/583 (97.43%), Postives = 576/583 (98.80%), Query Frame = 1
Query:    1 MKTVNNAVGRPLPEAKASKLPRHSKEKPEIRHTFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGASIPSPRGGSGAATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
            MKTVNNAVGRPLPEAKASKLPRHSKE P++RHTFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIK+RTYSQ MKELAGENGIIIVGFWNGNKFG+ALQYFY+KHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGAS PSPRGG G ATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPAT+FSTGLPAASFGFCFSQDALCHAGRQT KALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTS+AVHFKTLLEV AETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLR+
Sbjct:    1 MKTVNNAVGRPLPEAKASKLPRHSKENPDVRHTFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKSRTYSQ-MKELAGENGIIIVGFWNGNKFGEALQYFYYKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGASTPSPRGGGGVATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATFFSTGLPAASFGFCFSQDALCHAGRQTPKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSLAVHFKTLLEV-AETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRW 581          
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A836CC57_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC57_9STRA)

HSP 1 Score: 517 bits (1331), Expect = 5.690e-175
Identity = 283/573 (49.39%), Postives = 376/573 (65.62%), Query Frame = 1
Query:   97 TFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAH-PSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGAS--IPSP------RGGSGA-------ATAATFLPHPDTLSEDTLIAEEEAHSLNH-----YGDSFTQYFYRELWGG-LHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
            TF + GDWS M A+RWHD+MY+EG+YF +L+ DT VYT+   + YCG  A+  +VEVG GTGDVIL +A DF++S+G+DIN  FL Y++ +  K+L  ++ F +GSAT+L DI+    P++ + S   VVTCVNNTIGIFPDAIK  TY QQM+ELAG +GI+IVGFWNGNKFGDALQ+FY ++P+LCG++ GA ID E   L TA GY THW+TPEEAR VL   GF+V+D+TE+GVGVLCTC G AS  +P P      R G G+       A AAT   +  +++ D+  +  +  ++       Y D++ Q FYRE+WGG  +QH+GLY+  A   LPA  R VEACE +T+ L   A+P  G +  E GSG+G  +RYLA NF ATV CVD++R +N++NR+ T +AGL   V VG   ++F TG P ASF    SQD LCHA     +ALEE AR+L PGGV A TNI+   +A  EEL  VLARL+++ +++  S +  A  AGLE +E  D T S+  HF T+LEV+ E   A ++  TS  YV +    L  W  A   G LR+
Sbjct:    8 TFSKLGDWSTMTASRWHDAMYFEGAYFMKLWADTLVYTKEKAAKYCGGAAKCTNVEVGSGTGDVILGMAGDFRYSVGLDINSEFLRYSRARVAKDLDKRVKFIEGSATELTDIIMREVPTVRSGSV--VVTCVNNTIGIFPDAIKPATY-QQMQELAGPDGIVIVGFWNGNKFGDALQHFYARNPQLCGTMDGADIDWEGHTLTTAGGYRTHWSTPEEARTVLLRYGFDVVDVTEVGVGVLCTCKGRASGKVPPPQLAQPQRRGRGSSRDWTAVAAAATASSNNGSVNGDSRASSPDRRAIETAVAALYEDTYQQQFYREVWGGGRNQHIGLYDAAALGGLPAAARAVEACELATLRLVEKARPAHGARIAEFGSGFGGTARYLAANFDATVVCVDISRHANEVNRQQTREAGLQSKVLVGAERSFFETGEPDASFAMVVSQDTLCHAEDYAGRALEEGARILQPGGVMAFTNIVVDPQARPEELTRVLARLKMSCMDSPDSLIAAAEVAGLELVEFEDTTPSLVQHFSTILEVLDERCDA-LVATTSEAYVADTVGGLEAWRDAGINGALRW 576          
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A6H5KUA7_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA7_9PHAE)

HSP 1 Score: 399 bits (1024), Expect = 4.150e-134
Identity = 204/208 (98.08%), Postives = 207/208 (99.52%), Query Frame = 1
Query: 1126 MGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
            MGTKAVELGSGYGSGSRYLAVNFGATVDC+DLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEV AETRKADMLKHTSPEYVDEL+KDLRNWLSASNRGVLR+
Sbjct:    1 MGTKAVELGSGYGSGSRYLAVNFGATVDCIDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEV-AETRKADMLKHTSPEYVDELAKDLRNWLSASNRGVLRW 207          
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A7S3ZFK8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZFK8_9EUKA)

HSP 1 Score: 184 bits (468), Expect = 3.380e-49
Identity = 126/404 (31.19%), Postives = 199/404 (49.26%), Query Frame = 1
Query:  118 WSLMDAARWHDSMYYEGSYFWQ-LFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASD----FKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVLCTCSGGASIPSPRGGSGAATAATFLPHPDTLSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKR----VVEACENSTVVLFSIAKPTMG----TKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRV 1290
            W  M ++ W  +MY   S+F +    +T    R A     G P     VEVG GTG  +  +  +    FK  +G+D N  F+  A++  P        F  G   +L ++++ + S D   +  VV  VNNT GI P+ ++    ++ M +   ++G+II+G WNGN FGDA+Q+FY ++  LCGSL+GA  D ++  + TA  Y T WT PEE  ++++ES +NVLD+   G  +L           P+               +T  +D    E  A +  +Y       FY+  WGG + H+GLY++   +  P   +    V +A + S   L       MG     +A+++GS YG  +R +A  F   V CVD+++  ND+NR  T +AGL  LV++
Sbjct:   11 WREMSSSHWDQAMYENASFFNRHQVSNTDFIARHAVVNSRGKPI--VGVEVGTGTGKFLKIVLEEHPSLFKRLIGVDFNPNFIETARKAVPDA-----DFTLGDCRELKNVLNDNYSEDMQDSFKVVFSVNNTHGILPEKVRD-DINKAMADTTSDSGMIIIGLWNGNSFGDAVQHFYAQNDHLCGSLQGASFDWDECKMVTASNYTTKWTKPEELGKMIDES-WNVLDVVSSGPMLLIAAK-------PK---------------NTKVQDNASGEAGAETEYYYDTEDASRFYQNFWGGENVHIGLYDN---LEEPNESKDLETVFKASDKSLTRLLDHVYDHMGGLKIRRAMDMGSCYGGCAREMAQRFACEVLCVDMSKVENDINRERTLEAGLEKLVKI 380          
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: F2UCP4_SALR5 (Methyltranfer_dom domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UCP4_SALR5)

HSP 1 Score: 184 bits (468), Expect = 1.230e-48
Identity = 96/242 (39.67%), Postives = 143/242 (59.09%), Query Frame = 1
Query:   97 TFDRKGDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHPSIDNTSAPT--VVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGFNVLDITEIGVGVL 816
            T +  GDWSL    +W ++++   S+F QL+ DT  +  +      G       +EVGCGTG+ I+ LAS  K+ +GIDIN+ F+ Y+Q Q      D + F  G AT L +++S     D    P   +V CV NTIGI P+ ++   Y + M E+AG++G  +V +WNGN FG+A+Q+FY+++P+LCG  KG  +D +   L T  GY+T WT PEEAR +L+  G   L++ E G GV+
Sbjct:  195 TDEEGGDWSLFSVEKWRNAVFTTKSFFEQLYADTHTFIEQQVEKLGGRDNVCL-IEVGCGTGETIIPLASAAKYCIGIDINEDFIKYSQVQNKA---DNVRFVCGDATKLQELLSTSEVADWAGEPLRKLVICVGNTIGIIPEFLRDSIY-RNMAEVAGDDGACVVIYWNGNCFGEAVQHFYNENPQLCGPFKGKHVDFQACTLQTPSGYNTKWTKPEEARELLQSKGLTTLEVVEQGRGVM 431          
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A835YZA4_9STRA (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA4_9STRA)

HSP 1 Score: 164 bits (416), Expect = 9.190e-43
Identity = 90/256 (35.16%), Postives = 154/256 (60.16%), Query Frame = 1
Query:  982 FYRELWGGLHQHLGLYEDP-ATIALPANKRVVEACENSTVVLFSIAKPT-MGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVL 1743
            FY+++WGG   H+GLY+DP  T ++   +R+  A E S   LF+ A+P    +K +++GS YG  +R  A  +G TV C+D++ + N++NR  T   GL+D V +    ++F TG PA ++    SQD+L HAG +  +A+EEAAR+L PGG    T+I+++ +A   EL+ V  R+ +  + +  S+   A   GL+ +   D+T+++A H+  +  V+ E ++A+ L + SP YVD + + L  W++A+ +  L
Sbjct:   29 FYKQVWGGSFIHVGLYDDPQVTDSMDPMERIKLASELSAKRLFATAEPLDSSSKVMDMGSAYGGNARLCAKTYGCTVTCIDISCKENEVNRSTTAAEGLADKVLIPGERSFFETGEPAGAYDAVVSQDSLLHAGSERCRAIEEAARVLKPGGCLVFTDIMQSNDANTAELDAVYRRIHLEDMGSPASYQAWAERCGLKLVGFEDRTSNLAAHYGAVKGVL-EAKRAE-LTNISPAYVDNMIRGLDAWVNAAGKSNL 282          
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A9UZS4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UZS4_MONBE)

HSP 1 Score: 159 bits (402), Expect = 2.390e-37
Identity = 80/226 (35.40%), Postives = 130/226 (57.52%), Query Frame = 1
Query:  112 GDWSLMDAARWHDSMYYEGSYFWQLFHDTQVYTRRATSI---YCGPPARSFSVEVGCGTGDVILSLASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLID-IVSAHPSIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWNGNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEARRVLEESGF 777
            GDWS     +W  +++   S+F  L+ DT  +  +  +    +     +S  +EVGCGTG+ ++      ++ +G+D+N  F+ + ++QT ++   K+ F  G A  L   ++ A+          +VTCV NTIGI PD  K   Y   +K LAG +G+++V +WNGN FG+A+Q+FYHK+P+LCG+  G+ ID+ +  L T  GY T WTTP EA  +++ + F
Sbjct: 1098 GDWSEFSVNKWRSAVFTTKSFFNDLYEDTTAFINKYLAHLDDWFSGADQSCLIEVGCGTGESLIPHYDVARYCIGVDVNQVFVDFCKKQTTEKYAKKVGFACGDAEFLESMLLDANFGSFLNDTKKLVTCVGNTIGIIPDPKKTAIYRAMLK-LAGPDGVVVVVYWNGNCFGEAVQHFYHKNPQLCGTFDGSAIDLVNCSLTTPSGYSTKWTTPAEAETIIKVAIF 1322          
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A2E5MYM9_9PROT (SAM-dependent methyltransferase n=1 Tax=Magnetovibrio sp. TaxID=2024836 RepID=A0A2E5MYM9_9PROT)

HSP 1 Score: 142 bits (358), Expect = 8.980e-35
Identity = 87/267 (32.58%), Postives = 147/267 (55.06%), Query Frame = 1
Query:  955 HYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRV--GEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
            +Y  +    FY+ +WGG   H+GLY + A     A++R VE      V           T+ +++GSGYG  +RYLA  FG  V C++L+ + N+LNRRLT+ AGLSD +RV  G+         P  ++   ++QDA+ H+G +  + L+E  R+L PGG F  T+ ++ ++  N  L+ +L R+Q++SL +   +     S G +  E L  T  +  H+  + EV+ + R  +++K +  +YVD + K L+ W+  ++RG L +
Sbjct:   11 YYNSNEADNFYQIVWGGEDIHIGLYFNEADTIADASRRTVEQMATRLVDCKE------ATRVLDIGSGYGGSARYLAGRFGCQVTCLNLSEKQNNLNRRLTKNAGLSDKIRVVYGDFENILE---PDETYQIVWAQDAILHSGNR-KRVLDEVCRVLIPGGQFIFTDPMQTDDCPNGVLQPILDRIQLSSLASPIFYKTELNSRGFKEAEILLLTDHLRKHYWHVREVL-KFRYHEVVKFSGQKYVDNMIKGLQYWIDGADRGYLAW 266          
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: UPI0008F9D4B4 (methyltransferase domain-containing protein n=1 Tax=Geitlerinema sp. PCC 9228 TaxID=111611 RepID=UPI0008F9D4B4)

HSP 1 Score: 140 bits (353), Expect = 4.950e-34
Identity = 79/281 (28.11%), Postives = 152/281 (54.09%), Query Frame = 1
Query:  907 LSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
            +++ T  +E  + +  +Y  S  + FY  +WGG   H+G+Y+        A++R VE             K    TK +++G+GYG  +RYL   +G  VDC++L+   N+ NR+L ++ G++D + V +   + +  +  AS+   + QD++ H+  +T K LEEA R+L PGG F  T+ +++++   EE++ VL R+ + S+ +   +   A   G + ++ +D +  +  H+ ++L+ V E   A + K    EYV+ + K L +W++   +G L++
Sbjct:    1 MADPTTYSEAVSTAREYYNSSSAENFYSTIWGGEDIHVGIYQSENDTIFTASQRTVEKIAEQL-------KLAPSTKVLDIGAGYGGSARYLVKTYGCPVDCLNLSEVQNERNRKLNQEQGVADKIDVYD-GDFEALPMSDASYDVVWCQDSILHSSNRT-KVLEEAYRVLKPGGEFIFTDPMQSDDCNPEEIQPVLDRIHLPSMGSVGFYREVAARLGFDEVQFIDMSEQIPNHYGSVLKAVNENYDATV-KQCGEEYVENMRKGLNHWVNFGKQGKLKW 271          
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Match: A0A4Q7UW46_9PSEU (Sarcosine/dimethylglycine N-methyltransferase n=1 Tax=Pseudonocardia sediminis TaxID=1397368 RepID=A0A4Q7UW46_9PSEU)

HSP 1 Score: 137 bits (346), Expect = 4.220e-33
Identity = 86/273 (31.50%), Postives = 137/273 (50.18%), Query Frame = 1
Query:  931 EEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIALPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGATVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCFSQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLARLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRKADMLKHTSPEYVDELSKDLRNWLSASNRGVLRY 1749
            + EA + ++Y       FY  +WGG   H+GLY        PA++R VE        +  IA    GT+ ++LG+GYG   R LA   GA V C++L+   ND N RLT + GLSDLV V    +Y    LP AS    +SQDA  H+G +  K L+EA R+L PGG    T+ +  +     EL  +L R+Q++++ T   +       G+  +   D    +  H++ + E +   R++++    S +Y+  +   L++W+   N G L +
Sbjct:    5 QAEATARSYYDSEDADTFYSSVWGGEDIHVGLYATDDEEIAPASRRTVER-------MGEIAGIGKGTEVLDLGAGYGGAGRQLAKRLGAKVTCLNLSPVENDRNTRLTSEQGLSDLVSVST-GSYEDVPLPDASVDVVWSQDAFLHSGDR-DKVLDEAVRVLRPGGHVVFTDPMAVDGVDQSELTPILDRIQLSTMATPGFYTAGLEKRGMTGVTFHDHAAQLPTHYRRVREELV-ARESELRAAISEQYITNMKAGLQHWVDGGNAGNLTW 267          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig173.5160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8H5_ECTSI0.000e+097.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CC57_9STRA5.690e-17549.39S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A6H5KUA7_9PHAE4.150e-13498.08Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A7S3ZFK8_9EUKA3.380e-4931.19Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
F2UCP4_SALR51.230e-4839.67Methyltranfer_dom domain-containing protein n=1 Ta... [more]
A0A835YZA4_9STRA9.190e-4335.16Putative sarcosine-dimethylglycine methyltransfera... [more]
A9UZS4_MONBE2.390e-3735.40Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A2E5MYM9_9PROT8.980e-3532.58SAM-dependent methyltransferase n=1 Tax=Magnetovib... [more]
UPI0008F9D4B44.950e-3428.11methyltransferase domain-containing protein n=1 Ta... [more]
A0A4Q7UW46_9PSEU4.220e-3331.50Sarcosine/dimethylglycine N-methyltransferase n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig173contigEcto-sp13_S_contig173:24539..34503 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1143.6
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7G8H5
Model size1755
Hectar predicted targeting categoryother localisation
Exons10
EggNOG free text desc.sterol 24-C-methyltransferase activity
EggNOG OGsCOG0500@1,KOG1269@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-14_003050.1
Cds size1755
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig173.5160.1prot_Ecto-sp13_S_contig173.5160.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig173 24539..34503 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681462903.8279305-CDS-Ecto-sp13_S_contig173:24538..246781681462903.8279305-CDS-Ecto-sp13_S_contig173:24538..24678Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig173 24539..24678 +
1681462903.8408144-CDS-Ecto-sp13_S_contig173:26100..262081681462903.8408144-CDS-Ecto-sp13_S_contig173:26100..26208Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig173 26101..26208 +
1681462903.8505938-CDS-Ecto-sp13_S_contig173:28356..285011681462903.8505938-CDS-Ecto-sp13_S_contig173:28356..28501Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig173 28357..28501 +
1681462903.8608167-CDS-Ecto-sp13_S_contig173:28977..291301681462903.8608167-CDS-Ecto-sp13_S_contig173:28977..29130Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig173 28978..29130 +
1681462903.8707952-CDS-Ecto-sp13_S_contig173:29621..298311681462903.8707952-CDS-Ecto-sp13_S_contig173:29621..29831Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig173 29622..29831 +
1681462903.88022-CDS-Ecto-sp13_S_contig173:30614..308261681462903.88022-CDS-Ecto-sp13_S_contig173:30614..30826Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig173 30615..30826 +
1681462903.896512-CDS-Ecto-sp13_S_contig173:31641..317501681462903.896512-CDS-Ecto-sp13_S_contig173:31641..31750Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig173 31642..31750 +
1681462903.9055133-CDS-Ecto-sp13_S_contig173:32245..326771681462903.9055133-CDS-Ecto-sp13_S_contig173:32245..32677Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig173 32246..32677 +
1681462903.9138246-CDS-Ecto-sp13_S_contig173:33410..335331681462903.9138246-CDS-Ecto-sp13_S_contig173:33410..33533Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig173 33411..33533 +
1681462903.9227653-CDS-Ecto-sp13_S_contig173:34380..345031681462903.9227653-CDS-Ecto-sp13_S_contig173:34380..34503Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig173 34381..34503 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig173.5160.1

>prot_Ecto-sp13_S_contig173.5160.1 ID=prot_Ecto-sp13_S_contig173.5160.1|Name=mRNA_Ecto-sp13_S_contig173.5160.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=585bp
MKTVNNAVGRPLPEAKASKLPRHSKEKPEIRHTFDRKGDWSLMDAARWHD
SMYYEGSYFWQLFHDTQVYTRRATSIYCGPPARSFSVEVGCGTGDVILSL
ASDFKHSLGIDINDGFLAYAQEQTPKELKDKISFCKGSATDLIDIVSAHP
SIDNTSAPTVVTCVNNTIGIFPDAIKARTYSQQMKELAGENGIIIVGFWN
GNKFGDALQYFYHKHPELCGSLKGAVIDMEDRHLDTAEGYHTHWTTPEEA
RRVLEESGFNVLDITEIGVGVLCTCSGGASIPSPRGGSGAATAATFLPHP
DTLSEDTLIAEEEAHSLNHYGDSFTQYFYRELWGGLHQHLGLYEDPATIA
LPANKRVVEACENSTVVLFSIAKPTMGTKAVELGSGYGSGSRYLAVNFGA
TVDCVDLNRESNDLNRRLTEQAGLSDLVRVGEPATYFSTGLPAASFGFCF
SQDALCHAGRQTSKALEEAARLLAPGGVFACTNILRAEEATNEELEEVLA
RLQVTSLETHKSFVGHARSAGLEPLESLDKTTSMAVHFKTLLEVVAETRK
ADMLKHTSPEYVDELSKDLRNWLSASNRGVLRYV*
back to top

mRNA from alignment at Ecto-sp13_S_contig173:24539..34503+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig173.5160.1 ID=mRNA_Ecto-sp13_S_contig173.5160.1|Name=mRNA_Ecto-sp13_S_contig173.5160.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=9965bp|location=Sequence derived from alignment at Ecto-sp13_S_contig173:24539..34503+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAAACCGTCAACAATGCTGTTGGCCGACCTCTCCCGGAAGCCAAGGC CTCGAAGCTGCCCAGGCATTCCAAGGAGAAGCCGGAGATCAGGCACACGT TCGACAGGAAGGGAGACTGGAGCCTCATGGACGCGGCGAGGTGAGAGAGA GAGAGAGAGAGCAGAGTCTGCTGCGTTCCTCTATGTAGGCCTCACACTCC GAGCAAGAAGGGTGCGGCAGATGTCACACGAGGGAAAGCTGGAGCGACTT GATTGCGCGAAGACTTCCAATGTCAGGGATCTGTGACTTGACTGAAAATG TACGTGTGTACGTGTGAAGGGAGAGGTGTGCATGCATACGTGTGGTTTGA ATCATTCTTTCTTGCCGTGGCTAAACAAGATACCGCATGGTCAACAAAAT CATTCCTTCTCGTTTTTCTTTGGCCGTAAATTCCGTCGGAGATTTTCGCG CACCACGTCTGGAACCATCTCCCATCACAAGGAAAATGGAGATATTTCAC ATACCGCTTGCCTGTGGATGGTCAAGGTGCTATTCTCGCCCCTGAGAACC ACGCAACGTCGACTCCTGTCTTGGGCAATACACGGGGGGCAATCCCTCAG CTCATTAGTGTAATTCATGAAACATCTTTCACCCTTTCAGTCCACCCTTG GTTGATCTCGTGACCACCGTCGATCTTCGGTCAGTACCAGCCCTCCGGCG GACTCTGGGCTTTTTCCCTAGACTAGGTGCAACAGCCCTTTGTTGAGAGT TGCAGACTTTACCCATAAACCGGCTGTTTCCCCTCGGTTGGAGAGTCGGT TGCCGGGTCTTGCGTGGTGGATTATTTTTCTGGAGAACATTGGAAAGGTC GGTTGCTGCGAAATTGAAGCGCGTGCCCCGCTCATGTCGGCATGGCAGGC ACCAGATAGAAACAAAAACTGTTTTTTCCCCCCTTCCCTTGGAGGTGTGT TGTGTTCTAGGTTTGCGTTGAAATTCCATGTCGGCGTATTCGGCCGGGCA CCGTGAGTGTGTGGTCGGTGGTCAACGGTCTGTGGCCCCCTAGGAAAGCG CAGCAACAGCAATACCACGATACCACAGAGCGCATGATCATTAGGAAACA TGCGCAGGACAGCTTGTGAGCGCTTCATCATCGTGAAGCATAGGCTGCGA GTCCAGTCGGTCTTATGCCCCTCAGACCGAAACTTCAACGGTAACGTAAG TTGCTCCGAAGGGCATGTACTGCTGTTTGTCAAAGATCGGAGAGGAGGCG GACGAAAGGGCGCCAAGGGTGCAAAACGGAAACGATCCCTTTCTCACTTT TGGCATGGGCGGTTGATTTGTAGAGTGCGATCGATGACAAAAGAAAGAAC TACCCAGACGGGGACTAGAACGCAACAACAACAGCCATGGATTACTCTTT TGGCAGCCCTCTAGGCCGACTATCTTTTTATTCGAACAGATGCCCTTTCA CTCAGGCCCTGGACCATGTGCCGAAATTCGTAAACGCTCCTCGTTTCTGC TGCTGCTGCTGCTGCCGTTCCTTCGTACTCCTGGCTTTCGTCGACAAACT CCGACCCACCAGGTGGCACGACTCCATGTACTACGAGGGGAGCTACTTCT GGCAGCTGTTCCACGACACGCAGGTCTACACACGTCGTGCCACCTCCATC TATTGCGGCCCCCCGGCCAGGTACGTGCGTCCCATTATGTGCCTGCTTTG CTTGACCGTTACCGGACGGTGACGATCTCGTGCTGCTGCACTGTTAATTA AGAGTAATTTTTTTGCTGTCGGAGTTCTTTCTGCGAGCGGGCGTGTGTTG TTCGGTCTGACGTGTGGGGGTGGGTCTGCTGCAGTGTGCGTGTCATGTTG GTTTGGGGATGAGCGGGTGTCACCAGTCACCAGCTGCGTGGGATGTTGAG ATGCGACAGCGCAAGATGGGCCTTTTTTGCCGAGAAACTTCCTCAAGGTA CAGGCATCTTATCCATGAGCCTACCGGCGAGTTTCCTTACAAGTCCACTA CGTATGAGGTTAAATTTTCGGCGTTTGCAGCACCCCTCGCAGTAACCGAC CCCTTTCTCCAAGACTATGGGATTCGAAGGTGCAAAGGATACCATGCACG TCCAGGATCCCAAAGTTGTTGTCTTGTCCACGTTTAGAAAATTGTTCCGG TCTCTGCTGCTCAGCACCTGCTAACATCACCAGTCCATGACGCGGACGCC TGCCGTACAATGTAGTCAACAGCCCAAATGACGAAAGGGTACATGCAAAC TGCGAAGTACTTAACAAGACACCTACACACACAATTATACAAATGGAATT AGATTCGAAGGGTCTTTTTTGTCCGTTTCAAAACAATGTTCCCCACTCGT GCTGCTGTATCCTGCAATGATCTGTGATGTCCGTTCATATCGGGATGGGA ATGCTTCTTTGCGAATCCAACAACGAAAGCGCGCTCGACACCTGTCGTCC CGCGCATGTGTGAGGATGATGTTGCAAAATTTGTATCAATCGACGCCAGA TTTGATTGAATTGGGTGGCATACTAGTGTCGGGCGAATTCAACCATGATA CTTTGAGCAGGTTCTCTTTTGAGTTCACTCGGACTGACTTTAACTAGCTT GCTCAGGGCCTGTGTTTCGTGTTTTCGCCCTATTTATTATGGCGACAGCA GTCCATTTTTGCGTGGTTAGACCTATACCACACTACACTTTTCAGTGTAT TTATTCATAGAGTACTAGAGGGAATGGATTTTGGTAACATATTTATTTGC ATACCTATGCGTATTCATGGCTTTTGTGACTACAAAAAATCAGTATTTTG GCATAAATAGACCCAAAACAAGCCCAGTTACCAGCGGTTTTCTTCCCATT CACTGTCTGTCAAGACTTACACACATCCCCTGTATTGATGTATCTCAAAT GGGTAGTCTCTCTTTGATTGTACTTTCTATTTGCGCACCCGGTCAGCTCC ACCCGGTGCCATCTTCCCGACCAACCCGTTGCCATCTCTCCGACCGATGC CATCTCCCCGACCGGTGCCATCTCTCCGCATTTTAAGGCATGTCCTCCTC GTATGCTGTCTAACAGCAGCGCGACAAGTAGCAGCAGCAGCAGCAAGCTG CCACAATTCCGCAAGGATGTAAACCGCGGCATGTACCCTCGTTTGGGTTT TGCGCCCCTTCCCGTCGAAGTTATGCCATAGGGTGTTCCCCGCCCGCGCA GCTTTCGAGGGGCGGACTGCCCGTGGCCCCTTCTCCCATCACGATTGCAC GTCAGCGCAATCTCAACCACAGCTCATCCATTGTTGTGCCACACACTCAA CCTCCAACTCTAGGTTTGGTTTTGCAACAAAGCGTTTAGGACCCTTGATG TTTTTTACTCCCAGTTATTCCTGCATACGGATCGTTCCGCTCTACACTTT TGTCTGGGTGTAAAGTCTTGATGCACAAGTTGGGTCAAAGTCAAACTCTT CAAATGTCACTGCCCTTCCAAAAACAGTTTTCGCAACGCAAGTTTTATCT TGCAATATTGATGCCCGTTCTTTTCTCCGGATCATTATGAGTGTTTGCGG ATCCGACACGGAAACGCCTTCGACACCTGTCTCCCGGCGTACGTGTGATG ATGATCTTGCAGTATGTCTTGTTTAGTCGTCGCCAGGGGGGGTAATGTTG GGCAATGTGGGGCACACCCGGCCACCGTACTGTGTTTAGCAGTCGAACGC TCCCTGAGGATCGTTTTCTCTGCGAGTACGTCCGCGTGAACCCCACGCTT CTAATGTCCATGCGGTTCATTCACGTGTGTTTTCTTTTTTTTGTACCTCG GCTTTGTGACGATGACAGGAGCTTTTCCGTCGAGGTTGGTTGCGGGACGG GCGATGTTATCCTTAGCCTGGCGTCCGACTTCAAGCACAGCCTGGGAATC GACATCAACGACGGTTTCTTGGCGTACGCCCAGGAGCAGACCCCAAAAGA GCTCAAGGATAAGGTATGTGTCGGGGGGGGGGGGGCACTCTAGACAGTTC AGGTGTAAATAGACGGGGCGGCGTTGTTGTTGTTGCTGATTTTGCTGCTG CTGTTCGAATGTGGTTGTTTGGCCCGACCGGTTGGCATGCGCTCGATTGT GACGTGGGGTAACGCCGCGGCTGACGAACGCGTGTGGATTGGTTGATCTC GTCCTTGGTGTCTCGGATACCCGGGTGCATGGCGTGGCTCGACACATGCC TCGAAGCCTGCTGACCGCGAGTACAATACCGGCTTTTGCCGACCCGCTCA TCCACGCCACCCTTCAGCCGGTAGACCAAGCGTGCCGAGCAGCAAACAAC ACGTGAACGTACACGGACCTCGGCCTTTTTCATTGGCCGGCTGGTTTGCG CGGTCGATGCAAACCGAGAGAAGCACGCGCATACACGCACAAGCGCCGCC CCCACCCCCCCTCCCCTTGTTGTTCGGTGTGCCGCGCAGATATCGTTCTG CAAGGGGAGCGCGACCGACCTCATCGACATCGTCAGCGCCCATCCTTCCA TAGACAACACATCCGCGCCTACCGTGGTTACGTGCGTCAACAACACCATA GGGATATTCCCGGATGCGATCAAAGCCCGCACGTACTCACAGGTGTGTCT GCGAGCCTGCCCGCCCGTGTAAAGCGTTTGCTTGCGTTTGCGTGTGGTGG AAGGGTGCACTGAGGTGTCTAAGGTGCTTAATGCGCGTGCAATGTGTGTT TTTTCGTGACGACACAGCAGCGGATGTATAGGGCCGATGCGTTGTGGGTT TGGTGATGGTACGAAATTCCACGAGGGATAATGGCGAAATCTTGAAAGTG TGAGGGTTCCGTTTGGACGCAGGTGTTTTACTTTGTGTTGGTACGACATT CCAGGATGGGTATTGGTCAATTGACAAGAGAAATATGAAAGGCCGTTCCA TTGCGCGAGATCGCGCCCAAGCGTTGCAAGACAGAGACAACACGTGCACT CTGCTGGGCAGCACGACTTTCTGTTCGCACCTAGCCAAGGAACGACAACG TGTTTTGTTTAGCTCAAAAGACTCCCTGCCACTGCTATTGTCTTCGCGCC CCTCGGGACAACACAAACCAACGACGTCGAGAGCAGATGAAGGAGCTTGC TGGAGAGAACGGCATCATCATCGTCGGGTTCTGGAACGGGAACAAGTTCG GAGACGCCCTGCAGTACTTCTACCACAAGCACCCGGAGCTGTGCGGCTCG CTGAAGGGGGCCGTGATCGACATGGAGGACCGCCACCTCGACACGGCGGA GGGCTACCACACGCACTGGACCACCCCGGAAGAGGCTCGCAGGGTAAGCA CAGCGTCCATGTTTCTGCTTGCGGGACTTTGGAATATATTCGTCCTCTGC TCCGTCCTCTCGAGGACTCGTGGTCAATGGTCTAACCGCTAAGGCATGCA AAACATAAAGAGTACGCCCCCCTCCCTCTGCTCGGTGATGTGCTAGCCTG GTCCGGTGAAACCCGGCGTGCTGCGTGTCCGCCCCGGCCTTGTAGGGATG CGTACACCCCCCTCTTGCGGTTCTTCCCCGGTGGTTCTTTTCTGGCGTAA CTTTTTTACTCAAAAACCCTGAGGATGAGTCCAGGGACTAGATCAGGGCT AGGGTTGAGAGTACCCAACCACTTGTGACACGCGCAAGATTGGCGAGGGC AAGGTTGGTAAAGGCTCTACCTACCTCTACCTTGGGAGAGCGATTGATAT AGATGGGATGAGGGTTGGCCAACAATACGGTTAGGCGGAGGGAGGGTTGG GTTGCTTGCGGCCTCTGGGTCACTCCGCTGAAGAAGCTTGAGAGGTTGAA GACTTCTGGCGTTGTGCGTGGCCACAAATCGTTTCCCGTTTTTGCGGTTG CACAGCACAGGTATGCATGCATCATGCAGAGGCAATTGATTGTCAATCCA ACTTGTTTGGTTCTAAAGACTTTCGCCTAGTGCCGTTTTTTTTTGTCTTT TGGTGCAAACTTGTGCCCTTGCGTGAGCGAGCGTACAAGCGCGTGCTGCC CTGAAACACTTGGTTTCACGTCATCTACATCCGTCTTGTGACTGGTGACT GACTGTTGACGCTGCCCTGTCGCCAGGTGCTCGAGGAGAGCGGGTTTAAC GTCCTGGACATCACGGAGATCGGGGTGGGCGTGCTGTGCACCTGCTCCGG CGGCGCGTCCATTCCGAGTCCCAGGGGCGGCAGCGGCGCGGCGACGGCGG CGACTTTCTTGCCCCACCCGGATACCCTCTCAGAGGACACCCTTATAGCG GAGGAGGAAGCGCACTCCTTGAACCACTACGGCGACAGGTAAGGGGTCAA GAGGAAACAGCAGCTGACACAGTATAGGCTGCAAAGAGTCACCCACTCCC TCCCCTGGTGTGTGTGTGTGTTTGTATGTCCCCCCGTATAATCTGGACGC CAGTCCTTTCACCGACTCTGGCGGAAGGGGAAAAAAGATCCTGATCCCTG AGATATGGGGACGTAACTTACGCGACGAAACATAACCGCTCCTCATGGGA CCGTTATTTGGCGGTGATATGAGTTAAAAAAATTACAGGTCCCGCATCTG ATCATCGATGCCAATAGTCTACAGGTAGAAATTTCAACTCGAGAGGAGCG TGGTTTGTTGAGTGTGGTAGCTGCATATATAACCTGCCATAGGTTGGCTA GTTCTTTGGTGATATGTGGTGAGGAATGCCAAGCGGGACCGAGGGAACTC GGTCGAGCTCGATTCTGTTGCGGCGGACACACAGATTTTTCACGTTTTTT TCGTTTTCTTCCACCACTTGTGAGTCAGCGTCCACTGCAATTCTGCGGGG GTAGGACTCCATTCCGTAGGCATGGGAGAGGTTCCTCTCCGAGTGATCAG ATCGTTCTTGGGCATATTTCGAAAAACGAATATTCGTTCGCGTGACTTGA GCCGAGACTTGAACCCACGTTCCAAACCCCAGAAAGTTGCATTAGTCACA TACCATTACAGTACTCAAGCCACTCTGGTGTGGCTATTTATAGCTCCTCC CGTGCGATCGTTGACGAAACCGTTTGGTTATTGGCCGCCGTCTTTTGCTT GCGTGCGACCTCAACCTTGCCGTGGCAACGGGCGACCGGTCCCGCTCTTG CAGCTTCACGCAGTACTTCTACCGTGAGCTCTGGGGCGGGCTCCACCAGC ACCTGGGCTTGTACGAGGACCCCGCGACGATCGCCCTCCCCGCCAACAAA AGGGTGGTCGAGGTATGCACTTGAACAGGATAGCCCAGCGTGGTATCATA GTACGCCAGCGGTGGTGGTGCGGCGTACGGTACGCGTCCAGATGGAGGTC ATGCATATGCCGGCGCAACAATTTTTCACTATTGCTTGAGGTGTTTCGTG GCAGTTGACTCTCGTTTGCATGTTCTGCGGGAGTGGAGGTAGCGACGATC CAATCGAAGTAGGAAGGTAGGTGGCTGGTCCTTGTCCGTGGGTCCAGAAT ACAAAAATAAAGGGGTGCACAGGTTGAAGCGCGCAAGCTTGCTCCGTGAA ACAGCAACAATCCGAGGTTTGTGTCCGTGATCTTGTCGGGATCTTGCATC TGCTTGAGAACTCTAGCGTCGTGGTTCTAGAGAACAAACTTGCGGCACCA CGTGTTTGCTGTCGACTTCCTCTTGAGGTAGCAAGCTGAGACCACCTTCA ACTAAGAACCTCTCGCGTCCAAGCCTGACACCCCCCCCCGCCCCCCTCCC CTAACAGGCGTGCGAAAACAGCACCGTCGTCCTCTTCTCCATCGCCAAGC CCACCATGGGCACCAAGGCCGTCGAGCTCGGCTCCGGGTACGGCTCGGGC TCGCGGTACCTCGCGGTCAACTTCGGGGCGACGGTGGACTGCGTCGACCT CAACCGCGAGTCCAACGACCTCAACCGCCGCCTCACGGAACAGGCCGGCC TGTCCGACCTGGTCAGGGTCGGGGAGCCGGCCACCTATTTCAGCACCGGC CTGCCGGCGGCGTCGTTCGGCTTCTGCTTCTCACAGGACGCGCTGTGCCA CGCGGGGAGGCAGACGTCGAAGGCGCTCGAGGAGGCGGCTCGTCTGCTGG CCCCCGGGGGCGTTTTCGCCTGCACCAACATCCTCAGGGCGGAGGAGGCT ACGAACGAGGAGCTGGAGGAGGTGCTCGCGCGTCTGCAGGTGGGGTAATG GTCTGGGTCGTCATCGTTGGTTGATGACGATGATGATGGTTGTTGTTGTT GTTGTTGTTGTTGTTGGCGTTGGCTGATCGTACAAAACGCTCGCGAAGTC TGGTGTTGTCTTGTGGAGTACCATCTGTCTCACACACAAGAATGACCTGT TGGCTCTATCAAGGGAGCAGAAGCTGCCCGCCGTATCCCCACTTCACCTT TTGGTCGTAGCAGTAGGGTCGGCCTCAACTTTCACACATGAGCCCGTACA TACACCTGAGCAATGAAAGAGAGGCACAGAATCACGTTTTCCATCTCACG GAATCACAGCGTTGGTGGGCTATTGCGTTGGTCCAACTCGCCGGTAGACT TTGTCGAGGGCCCGATTTTCTTGTGCACCCTGTTGTATTGGTGCGAACCG CAGCACTTGCGAGGCTGTCGAACGAGATGGCGGCTAGGCTAGGCTAGGCT AGGCTAGGCTTACACGGCGAGACCCGGTGGGTGAAACGACCTACCTGCAC CACGCCTCTGAGTAGACTCGCTACATGCCCGAAGAAACAAGAAAAATCTC AACACAGAGTGAAAACGATGGTAAATAGCGTCCTCCGAATTCTAACACGC CAGAGAGCGAAATTTGCTGTGGAAGACAGTCACAGGGAAGGGGGTGTATA CTTATGTGCTTGTTGTTCGACGCGGTTACGCTCTCTCCTCCTCTCCCGGT CCCCGGCCTCCATTGTTATCAGGTGACCTCCCTGGAGACGCACAAGTCCT TCGTGGGGCACGCGCGCTCGGCCGGGCTGGAGCCTCTCGAGTCGCTCGAC AAGACCACGTCCATGGCCGTGCATTTCAAGACTCTCCTCGAGGTCGTGTT TCGTTCTAAAGTACACTTTTTGTGTGTGCGTGTTTTTTTTTTTTTTTTTT TTAGCGCTTTTCCCTCGGTGGCCCATCTGGGCCTGAGACAACATTGCAAC CACTACTGTCCTGGTGGAAGTTATCGAAGCTGCACGTAAGGGTTGTTTGT TGGAATCGTTCGCGATTTTCCTGCGCGTTCCTTGTCCGGTTTCTCGATGC TGTTGTGTACATCGCTGCTGTCGTTGTCGGCAATGTTACGGCGACGTCCA CGACCGGCAGTACGATGGTTGTGGTTTCGGTGGTGGGCCAGCTCTATAGT AGTTTGTTGAGGGCTGCTGCGCTATGATGTGCCGAGGAGAAGGGGATTGT TCTGTTTTTTGTGCCGGAGCACTTGAGGTCGCCCGCAGACATGGCTCTAT TGCACTGTGTAGGCTTCGCGAAGTGCCGGATGGAAATGTTCATCTGGTGT TCCTTGCAGCGTGCTTCGCCGAGACGTATACTAGTAGTGAGCAGCAAGTG AGGGTACTTTTCTGTGCTTAAGTGCGAGACCGCCGCCGCTGCTGCTGCTG AGGATGATCCTGTCGCTGTGGCGAAGATGGTGTGTAGCAACACGTTTACC ACGGATCATGCCGTCAGGCCAGGCTCATCGCCTAGTGTGGAGCACGCAGC GTGCAGGTTGGGCAAGAAACGCACGAGAAAGATTATTTTTGGCCGTCACC CTGCCTCTTAACATCGTCCACATACATCGCCGGACACGGTGTGCCTACTT GTCGCTCACCCTGTCTCTTGACCTATATACCCGGCTGAAACCCCTCTCTC TCGCTCGGCACCATCTCGTGGCGATGTATCGTATTGATTTAGGTTGCGGA AACGCGCAAGGCCGACATGCTGAAGCACACCTCTCCGGAGTACGTGGACG AGCTCTCGAAGGACCTTCGCAACTGGCTCTCAGCCTCGAACAGGGGTGTG CTCAGGTATGTGTAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig173:24539..34503+

>mRNA_Ecto-sp13_S_contig173.5160.1 ID=mRNA_Ecto-sp13_S_contig173.5160.1|Name=mRNA_Ecto-sp13_S_contig173.5160.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1755bp|location=Sequence derived from alignment at Ecto-sp13_S_contig173:24539..34503+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAAACCGTCAACAATGCTGTTGGCCGACCTCTCCCGGAAGCCAAGGC
CTCGAAGCTGCCCAGGCATTCCAAGGAGAAGCCGGAGATCAGGCACACGT
TCGACAGGAAGGGAGACTGGAGCCTCATGGACGCGGCGAGGTGGCACGAC
TCCATGTACTACGAGGGGAGCTACTTCTGGCAGCTGTTCCACGACACGCA
GGTCTACACACGTCGTGCCACCTCCATCTATTGCGGCCCCCCGGCCAGGA
GCTTTTCCGTCGAGGTTGGTTGCGGGACGGGCGATGTTATCCTTAGCCTG
GCGTCCGACTTCAAGCACAGCCTGGGAATCGACATCAACGACGGTTTCTT
GGCGTACGCCCAGGAGCAGACCCCAAAAGAGCTCAAGGATAAGATATCGT
TCTGCAAGGGGAGCGCGACCGACCTCATCGACATCGTCAGCGCCCATCCT
TCCATAGACAACACATCCGCGCCTACCGTGGTTACGTGCGTCAACAACAC
CATAGGGATATTCCCGGATGCGATCAAAGCCCGCACGTACTCACAGCAGA
TGAAGGAGCTTGCTGGAGAGAACGGCATCATCATCGTCGGGTTCTGGAAC
GGGAACAAGTTCGGAGACGCCCTGCAGTACTTCTACCACAAGCACCCGGA
GCTGTGCGGCTCGCTGAAGGGGGCCGTGATCGACATGGAGGACCGCCACC
TCGACACGGCGGAGGGCTACCACACGCACTGGACCACCCCGGAAGAGGCT
CGCAGGGTGCTCGAGGAGAGCGGGTTTAACGTCCTGGACATCACGGAGAT
CGGGGTGGGCGTGCTGTGCACCTGCTCCGGCGGCGCGTCCATTCCGAGTC
CCAGGGGCGGCAGCGGCGCGGCGACGGCGGCGACTTTCTTGCCCCACCCG
GATACCCTCTCAGAGGACACCCTTATAGCGGAGGAGGAAGCGCACTCCTT
GAACCACTACGGCGACAGCTTCACGCAGTACTTCTACCGTGAGCTCTGGG
GCGGGCTCCACCAGCACCTGGGCTTGTACGAGGACCCCGCGACGATCGCC
CTCCCCGCCAACAAAAGGGTGGTCGAGGCGTGCGAAAACAGCACCGTCGT
CCTCTTCTCCATCGCCAAGCCCACCATGGGCACCAAGGCCGTCGAGCTCG
GCTCCGGGTACGGCTCGGGCTCGCGGTACCTCGCGGTCAACTTCGGGGCG
ACGGTGGACTGCGTCGACCTCAACCGCGAGTCCAACGACCTCAACCGCCG
CCTCACGGAACAGGCCGGCCTGTCCGACCTGGTCAGGGTCGGGGAGCCGG
CCACCTATTTCAGCACCGGCCTGCCGGCGGCGTCGTTCGGCTTCTGCTTC
TCACAGGACGCGCTGTGCCACGCGGGGAGGCAGACGTCGAAGGCGCTCGA
GGAGGCGGCTCGTCTGCTGGCCCCCGGGGGCGTTTTCGCCTGCACCAACA
TCCTCAGGGCGGAGGAGGCTACGAACGAGGAGCTGGAGGAGGTGCTCGCG
CGTCTGCAGGTGACCTCCCTGGAGACGCACAAGTCCTTCGTGGGGCACGC
GCGCTCGGCCGGGCTGGAGCCTCTCGAGTCGCTCGACAAGACCACGTCCA
TGGCCGTGCATTTCAAGACTCTCCTCGAGGTCGTTGCGGAAACGCGCAAG
GCCGACATGCTGAAGCACACCTCTCCGGAGTACGTGGACGAGCTCTCGAA
GGACCTTCGCAACTGGCTCTCAGCCTCGAACAGGGGTGTGCTCAGGTATG
TGTAA
back to top