prot_Ecto-sp13_S_contig17293.5153.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17293.5153.1
Unique Nameprot_Ecto-sp13_S_contig17293.5153.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length407
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig17293.5153.1 vs. uniprot
Match: D7G528_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G528_ECTSI)

HSP 1 Score: 448 bits (1153), Expect = 1.760e-153
Identity = 340/401 (84.79%), Postives = 347/401 (86.53%), Query Frame = 0 
Query:    1 MKKKHKDEEKNDEKKTGEGAMDDDGRDDLEDNSDKQNLIMAIKLMESAHEQRYHRAVISKEDQAAATDTRLGAAGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAQRPGKSRRGAGGRVAALTGGKIRGKSGAIWDDWEQAVFFKDHPSDESEDDEETRASEQQARKVQAEDAQAQALSNGDVPKQKKTAKTGSARVRTFRTDPADG--ATELMSLMCKRLQRQDDSGGGXXXXXXGQNAGLDARVLSLETSSAKIVDLLGKTSSRMEHPQQATSPWTPGGYPVNWAPGGGWQAPAPXXPYGPTAGAAPWVQAGPAPTSXXXXXXXXXXXXXXXXXXXXXXXPLPGYHVGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAPWPAH 399
            MKK HKDEEKND KKTGEGAMDDD RDDLEDNSDKQNLIMAIKLMESAHEQR HRA ISKEDQ+AAT+TRLGAAGM    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     RAQRPGKS RGAGGRVAA  GGKIRGKSGAI+D+WE+AVFF DHPSDES DDEE RAS+QQARKVQA+DAQAQALSNGDVPKQKKTAK GSARVRTFRTDPADG  ATELMSLMCKRLQRQDDSGGGXXXXXXGQNAGLDARVLSLETSSAKIVDLLGK SSRMEH  QATSPW  GGYPVNWA GGGWQA AP  PYGPTAGAAPWVQAG     XXXXXXXXXXXXXXXXXXXXXXXPLPGYHVGAA  XXXXXXXXXXXX               TPAPWPAH
Sbjct:    1 MKKNHKDEEKNDAKKTGEGAMDDDQRDDLEDNSDKQNLIMAIKLMESAHEQRCHRASISKEDQSAATNTRLGAAGMPTQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGS-RAQRPGKSSRGAGGRVAAANGGKIRGKSGAIYDNWEEAVFFNDHPSDESGDDEEARASKQQARKVQADDAQAQALSNGDVPKQKKTAKAGSARVRTFRTDPADGDGATELMSLMCKRLQRQDDSGGGXXXXXXGQNAGLDARVLSLETSSAKIVDLLGKISSRMEHSPQATSPWGAGGYPVNWALGGGWQASAPGGPYGPTAGAAPWVQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPGYHVGAAGVXXXXXXXXXXXX---------------TPAPWPAH 385
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17293.5153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G528_ECTSI1.760e-15384.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17293contigEcto-sp13_S_contig17293:1044..2657 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17293.5153.1mRNA_Ecto-sp13_S_contig17293.5153.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17293 1044..2657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17293.5153.1 ID=prot_Ecto-sp13_S_contig17293.5153.1|Name=mRNA_Ecto-sp13_S_contig17293.5153.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=407bp
MKKKHKDEEKNDEKKTGEGAMDDDGRDDLEDNSDKQNLIMAIKLMESAHE
QRYHRAVISKEDQAAATDTRLGAAGMSTQSGAGALSSSRGAGRGDGNSSS
SRGSGGSGSRKGGGFRAQRPGKSRRGAGGRVAALTGGKIRGKSGAIWDDW
EQAVFFKDHPSDESEDDEETRASEQQARKVQAEDAQAQALSNGDVPKQKK
TAKTGSARVRTFRTDPADGATELMSLMCKRLQRQDDSGGGSGSGSGGQNA
GLDARVLSLETSSAKIVDLLGKTSSRMEHPQQATSPWTPGGYPVNWAPGG
GWQAPAPGGPYGPTAGAAPWVQAGPAPTSWPANAPGGAQGAPPGGQQGAP
AGPLPGYHVGAAGAAGAAGAAGAAGAVGAVGAAGAAGAVGATPAPWPAHA
TWGTQGA
back to top