prot_Ecto-sp13_S_contig17254.5125.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17254.5125.1
Unique Nameprot_Ecto-sp13_S_contig17254.5125.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length149
Homology
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.610e-16
Identity = 48/89 (53.93%), Postives = 52/89 (58.43%), Query Frame = 0
Query:    1 MATTDREALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEELRLASCAFAVVSCMSKLYPCHVFAGSIPKELDALANIRSL 89
            MA TDRE LV +F  T GT W  N NWNTTAEL TWYGIKVD  GRV EL L               P +   GSIPKEL  L N++SL
Sbjct:    1 MAATDREVLVAIFLLTDGTGWERNDNWNTTAELSTWYGIKVDGQGRVVELSL---------------PKNNLRGSIPKELGTLTNLKSL 74          
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Match: A0A6H5KQQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ0_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 2.220e-13
Identity = 41/91 (45.05%), Postives = 51/91 (56.04%), Query Frame = 0
Query:    1 MATTDREALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEELRLASCAFAVVSCMSKLYPCHVFAGSIPKELDALANIRSLDL 91
            MA+ DR+ALV LF STGG  W    NWNT A+  TW+G+KV+  GRV ++ L S               +   G IPKEL ALA + SL L
Sbjct:    1 MASKDRDALVALFCSTGGAGWTRRDNWNTDADRATWFGVKVNDQGRVVDVDLGS---------------NNLQGPIPKELGALAKLASLCL 76          
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Match: A0A6H5KQP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP2_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 8.080e-12
Identity = 39/89 (43.82%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    1 MATTDREALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEELRLASCAFAVVSCMSKLYPCHVFAGSIPKELDALANIRSL 89
            M +TDREALV+LF STGG  W    NW+T A+L TW G+ V++ GRV  L L                 +   GSIP EL  LA +R+L
Sbjct:    1 MVSTDREALVSLFRSTGGAGWIRRDNWDTDADLATWNGVNVNVQGRVVNLDLQY---------------NNLQGSIPPELGKLAALRAL 74          
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.090e-11
Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    1 MATTDREALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEELRLASCAFAVVSCMSKLYPCHVFAGSIPKELDALANIRSL 89
            MA+TDREALV LF STGG  W   GNW+T A + TW+G++V+  GRV  L L                 +   G IP EL AL+ ++ L
Sbjct:    1 MASTDREALVALFRSTGGAGWRQRGNWDTDAAIATWHGVEVNAQGRVVNLSLGG---------------NSLRGHIPPELGALSELQEL 74          
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Match: A0A6H5KCH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCH6_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.440e-11
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 MATTDREALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEELRL 52
            MA+TDREAL+TLF S GG  W+   NW T+  L TWYG++V+  GRV +LR+
Sbjct:    1 MASTDREALITLFRSAGGARWFRRNNWLTSDGLATWYGVEVNDQGRVVKLRV 52          
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Match: D7FPS8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS8_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 9.520e-11
Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 0
Query:    1 MATTDREALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEELRLASCAFAVVSCMSKLYPCHVFAGSIPKELDALANIR 87
            MA+ DR+ALV LFH+TGG NW    NW T+A+L TW G+KV+ +GRV EL L+                +   G+IP EL  L  +R
Sbjct:  187 MASPDRDALVALFHATGGDNWTRKSNWCTSAKLGTWKGVKVNEEGRVVELDLSD---------------NNLRGTIPVELGKLGALR 258          
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Match: D7FHA4_ECTSI (Hypothetical leucine rich repeat protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA4_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 3.800e-10
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 MATTDREALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEELRLA 53
            M + DR ALV LF STGGT W  N  W+T A+L  WYG+ V+ DGRV+ELRL+
Sbjct:    1 MPSEDRAALVALFRSTGGTLWKHNAYWDTDAKLSQWYGVYVNQDGRVKELRLS 53          
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Match: A0A6H5JBQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBQ0_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 6.080e-10
Identity = 37/88 (42.05%), Postives = 48/88 (54.55%), Query Frame = 0
Query:    1 MATTDREALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEELRLASCAFAVVSCMSKLYPCHVFAGSIPKELDALANIRS 88
            MA+ DR+ALV LFH+TGG NW    NW T A L TW G++V+  GRV EL L+                +   G+IP EL  L  +R+
Sbjct:  189 MASPDRDALVALFHATGGDNWTRKSNWCTAARLGTWEGVQVNQQGRVVELDLSD---------------NNLRGAIPGELGKLGALRN 261          
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Match: A0A6H5KKN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN5_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 6.220e-10
Identity = 35/91 (38.46%), Postives = 51/91 (56.04%), Query Frame = 0
Query:    8 ALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEELRLASCAFAVVSCMSKLYPCHVFAGSIPKELDALANIRSLDLVDHELTG 98
            AL+ LFHST G+NW    NWNT A L TW G++++  GRV  L L               P +   GSIP+ L AL+ +  +++ +++LTG
Sbjct:   70 ALIALFHSTDGSNWKRKSNWNTDAGLATWEGVELNHAGRVVGLFL---------------PNNNLHGSIPEALGALSELEKINMSNNKLTG 145          
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 3.850e-9
Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 0
Query:    1 MATTDREALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEELRLASCAFAVVSCMSKLYPCHVFAGSIPKELDALANIRSLDL 91
            MA+TDR+ALV LF S GG  W    NW+T A+L +W+G+ ++  GRV EL+LA                +   G IP+++ AL  I  L L
Sbjct:    1 MASTDRDALVALFRSAGGATWRRKENWDTAADLESWFGVILNNQGRVAELKLAV---------------NNLQGVIPEKIGALNKIEILTL 76          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17254.5125.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL98_ECTSI1.610e-1653.93LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KQQ0_9PHAE2.220e-1345.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQP2_9PHAE8.080e-1243.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX56_ECTSI1.090e-1142.70LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KCH6_9PHAE1.440e-1155.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPS8_ECTSI9.520e-1143.68Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FHA4_ECTSI3.800e-1058.49Hypothetical leucine rich repeat protein (Partial)... [more]
A0A6H5JBQ0_9PHAE6.080e-1042.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKN5_9PHAE6.220e-1038.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUC9_ECTSI3.850e-939.56LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..148
e-value: 2.2E-19
score: 71.0
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 43..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17254contigEcto-sp13_S_contig17254:712..3717 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17254.5125.1mRNA_Ecto-sp13_S_contig17254.5125.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17254 712..3717 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17254.5125.1 ID=prot_Ecto-sp13_S_contig17254.5125.1|Name=mRNA_Ecto-sp13_S_contig17254.5125.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp
MATTDREALVTLFHSTGGTNWYCNGNWNTTAELFTWYGIKVDLDGRVEEL
RLASCAFAVVSCMSKLYPCHVFAGSIPKELDALANIRSLDLVDHELTGIA
LEECGPGCYWTEVNVVYSFLTASSIPKELGTLTKMLRLNLTRNKLAGKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf