mRNA_Ecto-sp13_S_contig17249.5122.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17249.5122.1 vs. uniprot
Match: A0A6H5LFY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFY0_9PHAE) HSP 1 Score: 363 bits (932), Expect = 2.960e-120 Identity = 194/232 (83.62%), Postives = 200/232 (86.21%), Query Frame = 1
Query: 109 MSRVFVLLCFLLPAGVHTFVGHHQVVVGRRTASGSSGYDITQRAP------------PSTRCCTELRMASSKSKRSKKAKITTAGPTAAATVSRDEDLAGLLRWAGEEIGVKAPKLKGSFVDGLRGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKDFWASSPWQVRLALLLLREKQKGAASELEPWISRLPESFGTPVSWSAAELSELQYPHLEVVAREQREE 768
MSRVFVLLCFLLPAGVH+F+GH QVV+G RT SGS DITQ+AP P TR CTELRM SSKSKRS AGPTA ATVSRDEDLAG LRWAGEEIGVKAPKLKGSFVDGLRGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSK+FWASSPWQVRLALLLLREKQKGA SELEPWISRLPESFGTPVSWSAAEL ELQYPHLEVVA+EQREE
Sbjct: 1 MSRVFVLLCFLLPAGVHSFLGHPQVVIGSRTESGS---DITQQAPSAAWTQAATPPQPPTRYCTELRMTSSKSKRSXXXXXXXAGPTATATVSRDEDLAGFLRWAGEEIGVKAPKLKGSFVDGLRGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKEFWASSPWQVRLALLLLREKQKGAGSELEPWISRLPESFGTPVSWSAAELLELQYPHLEVVAKEQREE 229
BLAST of mRNA_Ecto-sp13_S_contig17249.5122.1 vs. uniprot
Match: D7G027_ECTSI (Protein N-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G027_ECTSI) HSP 1 Score: 353 bits (907), Expect = 6.700e-120 Identity = 189/230 (82.17%), Postives = 190/230 (82.61%), Query Frame = 1
Query: 109 MSRVFVLLCFLLPAGVHTFVGHHQVVVGRRTASGSSGYDITQRAPPS----------TRCCTELRMASSKSKRSKKAKITTAGPTAAATVSRDEDLAGLLRWAGEEIGVKAPKLKGSFVDGLRGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKDFWASSPWQVRLALLLLREKQKGAASELEPWISRLPESFGTPVSWSAAELSELQYPHLEVVAREQREE 768
MSRVFVLLCFLLPAGVHTFVGHH TRCCTELRMASSKSKRSKKA+ AGPTAAATVSRDEDLAG L WAGEEIGVKAPKLKGSFVDGLRGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKDFWASSPWQVRLALLLLREKQKGAASELEPWISRLPESFGTPVSWSAAELSELQYPHLE VAREQREE
Sbjct: 1 MSRVFVLLCFLLPAGVHTFVGHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRCCTELRMASSKSKRSKKARTAPAGPTAAATVSRDEDLAGFLHWAGEEIGVKAPKLKGSFVDGLRGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKDFWASSPWQVRLALLLLREKQKGAASELEPWISRLPESFGTPVSWSAAELSELQYPHLEAVAREQREE 230
BLAST of mRNA_Ecto-sp13_S_contig17249.5122.1 vs. uniprot
Match: A0A7S4T5D2_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4T5D2_9DINO) HSP 1 Score: 98.2 bits (243), Expect = 1.330e-19 Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 367 AGLLRWAGEEIGVKAPK-----LKGSFVDGLRGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKDFWASSPWQVRLALLLLREKQKGAASELEPWISRLPESFGT-PVSWSAAELSELQYPHLEVVAREQREE 768
AG WA E +GV APK L +F LRG+VA ++ ++ ++ VP+ AL TTT CP V W + PW +LA+LL+RE Q+G S L W++ LP F T P++WS AEL L+YP L R QR E
Sbjct: 104 AGWRGWA-EALGVAAPKVELDTLSDAFGAELRGMVARSSVESDEPLITVPAAHALQTTTGGNCPLGSEVVGACWQALPWWAQLAVLLVREGQRGRGSALASWVASLPHDFATVPLNWSDAELDLLEYPTLVERVRRQRRE 242
BLAST of mRNA_Ecto-sp13_S_contig17249.5122.1 vs. uniprot
Match: A0A7S1EFA4_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EFA4_HEMAN) HSP 1 Score: 79.7 bits (195), Expect = 5.690e-15 Identity = 51/130 (39.23%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 367 AGLLRWAGEEIGVKAPKLK-GSFVDGLRGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFP-EWVSKDFWASSPWQVRLALLLLREKQKGAASELEP---WISRLPESF-GTPVSWSAAELSELQYPHL 738
A L+WA ++ G+ APK+K F G RG+ A+ +I +E+V +P L Q P P E+ DFW+ VRLAL+L+ E+Q+ A L P W+ LP+S P WS AEL EL+ P L
Sbjct: 16 AAFLQWA-KQRGISAPKVKIAEFPGGYRGMAASTDIRAGEELVSLPRSICLSVGNRQPSPLPIEFAGTDFWSMQSQHVRLALVLIFERQRAAIDPLSPYKEWLDVLPQSHQDKPCRWSKAELEELRDPLL 144
BLAST of mRNA_Ecto-sp13_S_contig17249.5122.1 vs. uniprot
Match: C1MMF2_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MMF2_MICPC) HSP 1 Score: 72.8 bits (177), Expect = 5.240e-11 Identity = 44/112 (39.29%), Postives = 60/112 (53.57%), Query Frame = 1
Query: 445 RGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKDFWAS----SPWQVRLALLLLREKQKGAASELEPWISRLPESFGTPVSWSAAELSELQYPHLEVVAREQREE 768
RG+ A + I D +V +P ES LV D PFP++ + W+ + W +R+AL LL E KGAAS + S+LP+SF WS EL LQY + A QR+E
Sbjct: 88 RGVKAKKKINPGDVLVELPRESCLVLADDAELPFPDFCTNALWSKLVEKNKWALRVALNLLHETSKGAASPFHAYTSQLPKSFDLLSEWSDDELKMLQYAPVVRAAEGQRKE 199
BLAST of mRNA_Ecto-sp13_S_contig17249.5122.1 vs. uniprot
Match: A0A2P6TNY5_CHLSO (Fructose-bisphosphate aldolase-lysine N-chloroplastic n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TNY5_CHLSO) HSP 1 Score: 59.7 bits (143), Expect = 1.290e-6 Identity = 41/133 (30.83%), Postives = 64/133 (48.12%), Query Frame = 1
Query: 328 PTAAATVSRDEDLAGLLRWAGEEIGVKAPKLKGSFVDGLRGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKDFWASSPWQVRLALLLLREKQKGAASELEPWISRLPESFGTPVSWSAAELSELQ 726
P AA ++ E LA L AG + K + G GLV + + +++ VVP+ + + T + + PW + +AL LL E+ KGAAS P+++ LP G+P+ WS +L ELQ
Sbjct: 45 PVHAAATAQTEGLAAWLAAAGLDAA------KQAVAAGAGGLVCARPVKAGEQLFVVPAAAWITAETAAQSD----IGQHLQGLEPW-LAVALFLLHERAKGAASRWAPYLAALPADSGSPLQWSEEDLKELQ 166
BLAST of mRNA_Ecto-sp13_S_contig17249.5122.1 vs. uniprot
Match: A0A7S4DZW6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DZW6_9EUKA) HSP 1 Score: 57.8 bits (138), Expect = 2.360e-6 Identity = 50/153 (32.68%), Postives = 69/153 (45.10%), Query Frame = 1
Query: 331 TAAATVSRDEDLAGLLRWAGEEIGVKAPKLKGSFV-DGLRGLVATQNIAKNDEMVVVPSESAL-------VTTTDQL---------CPFPEWVS-KDFWASSPWQVRLALLLLREKQKGAASELEPWISRLPESFGT-PVSWSAAELSELQYP 732
T A+ S D + LLRW G P +K F D L AT +AKN+ +V PSE L ++ +D P W D W++RL L+LLRE+ +G S +I LPE+ T P+ +S E+ LQYP
Sbjct: 34 TVGASASTDYITSTLLRWFSSGEGYVNPNVKIRFEHDKGYHLYATGPLAKNEVLVTSPSEMHLRMSHSNPISKSDPRYEPSALADDVPMAYWEEIDDITRPEDWEIRLGLVLLRERFRGRMSPFHEFIQCLPENLPTIPMFYSVEEIEMLQYP 186
BLAST of mRNA_Ecto-sp13_S_contig17249.5122.1 vs. uniprot
Match: A0A6A6EZQ1_9PEZI (Ribosomal lysine N-methyltransferase 4 n=1 Tax=Cercospora zeae-maydis SCOH1-5 TaxID=717836 RepID=A0A6A6EZQ1_9PEZI) HSP 1 Score: 55.5 bits (132), Expect = 3.210e-5 Identity = 36/94 (38.30%), Postives = 54/94 (57.45%), Query Frame = 1
Query: 445 RGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKDFWASSPWQVRLALLLLREKQKGAASELEPWISRLPESFGTPVSWSAAELSELQ 726
RG+VAT+++A+++E+ +P S L T L P V K+ PW + L L ++ E KG S +P+ + LPESF + + WS ELS LQ
Sbjct: 43 RGVVATKDLAEDEELFSIPRSSILTAETSDL---PAAVRKEI--DHPW-LSLILAMVYEYLKGDDSPWQPYFNLLPESFDSLMFWSDDELSYLQ 130
BLAST of mRNA_Ecto-sp13_S_contig17249.5122.1 vs. uniprot
Match: A0A2S6C598_9PEZI (Ribosomal lysine N-methyltransferase 4 n=3 Tax=Cercospora TaxID=29002 RepID=A0A2S6C598_9PEZI) HSP 1 Score: 54.3 bits (129), Expect = 7.660e-5 Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 1
Query: 445 RGLVATQNIAKNDEMVVVPSESALVTTTDQLCPFPEWVSKDFWASSPWQVRLALLLLREKQKGAASELEPWISRLPESFGTPVSWSAAELSELQ 726
RG+VAT+++A+++E+ +P S L T L P V K+ PW + L L ++ E KG S P+ LPESF + + WS ELS LQ
Sbjct: 43 RGVVATKDLAEDEELFSIPRSSILTAETSDL---PAAVRKEI--DHPW-LSLILAMVYEYLKGDDSPWRPYFDLLPESFDSLMYWSDDELSYLQ 130 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17249.5122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17249.5122.1 >prot_Ecto-sp13_S_contig17249.5122.1 ID=prot_Ecto-sp13_S_contig17249.5122.1|Name=mRNA_Ecto-sp13_S_contig17249.5122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=256bp MLPLPAPLLLPAAADAAAGFWLLGSSCEFDGQSGSTMSRVFVLLCFLLPAback to top mRNA from alignment at Ecto-sp13_S_contig17249:467..3728+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17249.5122.1 ID=mRNA_Ecto-sp13_S_contig17249.5122.1|Name=mRNA_Ecto-sp13_S_contig17249.5122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3262bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17249:467..3728+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17249:467..3728+ >mRNA_Ecto-sp13_S_contig17249.5122.1 ID=mRNA_Ecto-sp13_S_contig17249.5122.1|Name=mRNA_Ecto-sp13_S_contig17249.5122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=768bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17249:467..3728+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |