prot_Ecto-sp13_S_contig1724.5115.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1724.5115.1
Unique Nameprot_Ecto-sp13_S_contig1724.5115.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1137
Homology
BLAST of mRNA_Ecto-sp13_S_contig1724.5115.1 vs. uniprot
Match: A0A6H5JRL3_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL3_9PHAE)

HSP 1 Score: 1201 bits (3106), Expect = 0.000e+0
Identity = 855/1075 (79.53%), Postives = 881/1075 (81.95%), Query Frame = 0
Query:   62 AMAVDGGGDMDTVDDADDNYDTNGDGGEINSPPESPIGLGLDDGSGGANVGGYSASGGRQGSSTKLGFGRKGRSMGPSDHSHQSEQEARACDLCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKTVFSPNQLYRKGMVFWEMFRPYMTFFKEVDAIDSWGRPRRSLMWMLAVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXRSSGGQDGGLSTSLLGTPWLGDSVGTGGGSRRQSLLFLPAAFASSPVSPARVGREGQEGXXXXXXXXXXXXXXXXXXXTTGVSMSMRSTSRSQWKSSTTLFSLSRTLTRGNRGTPVRRRVSDPDPVTANAVGSATAGVALRNSSSAPSRTAPWRAKAPRSAPPSTISTPTTMARTSIFPASSGAPQSPSTPRDLSVSNGAATSRNNVNTGAGVGAGVSRDVVHAAGVAKGGMISAAGAGSKKIKKLLPVRGTRDPELRELYERLGSTKRVPAVVNQLGKVFFTKSGPSIQRGLDKMGMMLIKIRQRFHPLHARDLGVTLTALFAHMVLQLWLYLSGRFNLYFVLLVVGQSLSKLYKRWGKALVMGLKQARRSCRTRQALSHAMSAIAANAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMVIRNPFKFDAANPPAFAPPGTTPALEPHLNGDGPQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFSXXXXAESDTATPRGRGGNVPSLSVLVSPPRARSIAVFRGSSSXXXXXXXXXARPGAPDGSGRRQPNPESDVGXXXXXXXIEGQRRGGAXGGKPRRWSILRGKRTKSXXXXXXXXXXXXXLAARGQEEADRDQGRVVRPTSPVPPRGGNPHGVRARGKIRMRWGRVIGATVALVCGLAALSAVAGTFFSPPQESVEEPVPSLAAMWQAVAVALSGMTAFFSFGGNGGLGEAAWRGAGTKMTTVWGSGRERLWWEGASAPTGYEDDEGDANDHDEAASSTLPLSAVLK 1136
            A AVDGGGDMDTVDDAD        GGEINSPPESPIGLGLDDGSGG N GGYS SG                SMGPSDHSHQSEQEARACD+CIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPK VFSPNQLYRKGMVFWEMF+PY+TF KEVDAI+SWGRPRRSLMWMLAVV                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                      SGGQ+ GLS SLLGTPWLGD+ GTGGGSRRQSL FLPA FASSPVSPARVG      XXXXXXXXXXXXXXX        SMSMRSTSRSQ KSSTTLFSLSRTLTRG       RRVSDPDPVTAN VGS+TAGVALRNSSSAPSRTAPWRAKAPRSAPPST++ PTTMARTSIF ASSGAPQSP TPRDLS+SN A +S NNVNTG GVGAGVSRDVVHAAGVAKGGMISAAGAGSKKIKKLLPV GTRDPELRELYERLGSTKRVPAVVNQLGKVFFTKSGPS+Q GLDKMG+MLIKIRQRFHPLHARDLGVT+TALFAHMVLQLWLY+SGRFNLYFVLLVV QSLS LYKRWGKA V+GLK+ARRSCRTRQALSHAMSA AANA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      N F FDAANPPAFAPPGTTPALEP+ NGDGPQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXX    TATPR RGG VPSL VLVSPPRARS AVFRG SS XXX     ARPGA DGSGRRQP+PESDVG       IEGQRRGGA GGKPRRW +L GKRTK+ XXXXXXXXX   LAARGQEEADR+QG  +R  SPVPPRGGN HGVRARGKIRMRWGRVIGATVALVCGLAALSAV GTFFSPPQESVEEPVPSLAA+WQAVAV LSGM AF SFGGNGGLGEAAWR AG KMTTVWGSGRERLW EGASA  GY+DDEGDAN+HDEAASSTLPLSAVLK
Sbjct:  130 ATAVDGGGDMDTVDDADXXXXXXXXGGEINSPPESPIGLGLDDGSGGGNGGGYSLSGXXXXXXXXXXXXXXXGSMGPSDHSHQSEQEARACDVCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKIVFSPNQLYRKGMVFWEMFKPYVTFLKEVDAINSWGRPRRSLMWMLAVVGMLVVPPVLIVVVNVALMHIAVSAYLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAPASTDPTSNDPSPSSLVTAPAVT---------DERSGGQEEGLS-SLLGTPWLGDNAGTGGGSRRQSLFFLPA-FASSPVSPARVGXXXXXXXXXXXXXXXXXXXXXEP------SMSMRSTSRSQRKSSTTLFSLSRTLTRG-------RRVSDPDPVTANTVGSSTAGVALRNSSSAPSRTAPWRAKAPRSAPPSTMTMPTTMARTSIFAASSGAPQSPFTPRDLSISNAAGSSSNNVNTGPGVGAGVSRDVVHAAGVAKGGMISAAGAGSKKIKKLLPVWGTRDPELRELYERLGSTKRVPAVVNQLGKVFFTKSGPSMQLGLDKMGVMLIKIRQRFHPLHARDLGVTMTALFAHMVLQLWLYVSGRFNLYFVLLVVSQSLSNLYKRWGKAFVLGLKEARRSCRTRQALSHAMSATAANAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------NTFMFDAANPPAFAPPGTTPALEPYHNGDGPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATPRRRGGTVPSLPVLVSPPRARSFAVFRGGSSSXXXGSGS-ARPGASDGSGRRQPSPESDVGDGGAG--IEGQRRGGAGGGKPRRWRMLWGKRTKTGXXXXXXXXX---LAARGQEEADREQGGDLRSPSPVPPRGGNSHGVRARGKIRMRWGRVIGATVALVCGLAALSAVPGTFFSPPQESVEEPVPSLAAIWQAVAVMLSGMRAFLSFGGNGGLGEAAWRVAGAKMTTVWGSGRERLWREGASAAAGYDDDEGDANNHDEAASSTLPLSAVLK 1168          
BLAST of mRNA_Ecto-sp13_S_contig1724.5115.1 vs. uniprot
Match: D7FL70_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL70_ECTSI)

HSP 1 Score: 599 bits (1544), Expect = 2.170e-199
Identity = 359/590 (60.85%), Postives = 377/590 (63.90%), Query Frame = 0
Query:   88 GEINSPPESPI--GLGLDDGSGGANVGGYSASGGRQGSSTKLGFGRKGRSMGPSDHSHQSEQEARACDLCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKTVFSPNQLYRKGMVFWEMFRPYMTFFKEVDAIDSWGRPRRSLMWMLAVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXRSSGGQDGGLSTSLLGTPWLGDSVGTGGGSRRQSLLFLPAAFASSPVSPARVGREGQEGXXXXXXXXXXXXXXXXXXXTTGVSMSMRSTSRSQWKSSTTLFSLSRTLTRGNRGTPVRRRVSDPDPVTANAVGSATAGVALRNSSSAPSRTAPWRAKAPRSAPPSTISTPTTMARTSIFPASSGAPQSPSTPRDLSVSNGAATSRNNVNTGAGVGAGVSRDVVHAAGVAKGGMISAAGAGSKKIKKLLPVRGTRDPELRELYERLGSTKRVPAVVNQLGKVFFTKSGPSIQRGLDKMGMMLIKIRQRFHPLHARDLGVTLTALFAHMVLQLWLYLSGR 675
            GEINSPPESPI  GLG+DD   G N GGYSASGGRQGSSTKLGFGRKG SMGPSDHSHQSEQEARACD+CIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPK VFSPNQLYRKGMVFWEMFRPY+TF KEVDAI SWGRPR+                                                                                                             + GG+     G   +   VG  GG             +                                               RSQ KSSTT FSLSR+L RGNRG P+RRRVSDPDPVTANAVGSA+AGVALRNSSSAPSRTAPWRAKAPRSAPPSTI+TPTTMARTSIF ASSGA Q PSTPR LS+SN AA   NN  TG GVG+GVSRDVVHAAGVAKGG+ISAAGAGSKKIKKLLPVRGTRDPELRELYERLG TKRVPAVVNQLGKVFFTKSGPSIQ GLDKMGMMLI IRQRFHPL ARDLG+T+TALFAHMVLQLWLY+SGR
Sbjct:  154 GEINSPPESPIHVGLGVDDDFAGGNGGGYSASGGRQGSSTKLGFGRKGGSMGPSDHSHQSEQEARACDVCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKIVFSPNQLYRKGMVFWEMFRPYVTFLKEVDAISSWGRPRK-------------------------------------------------------------------------------------------------------------RQGGV----FGARRIRFDVGQEGGXXXXXXXXXXXQLSMXXXXXXXXXX------------------------------------RSQRKSSTTFFSLSRSLIRGNRGAPIRRRVSDPDPVTANAVGSASAGVALRNSSSAPSRTAPWRAKAPRSAPPSTITTPTTMARTSIFAASSGASQPPSTPRALSISNAAAIDSNNSYTGPGVGSGVSRDVVHAAGVAKGGVISAAGAGSKKIKKLLPVRGTRDPELRELYERLGGTKRVPAVVNQLGKVFFTKSGPSIQLGLDKMGMMLIMIRQRFHPLRARDLGLTMTALFAHMVLQLWLYVSGR 594          
BLAST of mRNA_Ecto-sp13_S_contig1724.5115.1 vs. uniprot
Match: D7G4V0_ECTSI (Protein kinase C, beta 1, like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V0_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 2.550e-23
Identity = 54/116 (46.55%), Postives = 76/116 (65.52%), Query Frame = 0
Query:  129 FGRKGRSMGPS-DHSHQSEQEARACDLCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKTVFSPNQLYRKGMVFWEMFRPYMTFFKEVDAIDSWGRPRRSLMWMLAVV 243
             GRKG +     DH H   +E+ +C+ CIE RRKRFGEVRL L ++++EFAE CSH WPEEP +P +  FSPN++Y   M+  ++ +PY+   +E  AI  W  P +SL W +A+V
Sbjct:  217 LGRKGATAEDRIDHDHGPREESPSCEACIEVRRKRFGEVRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQEASAIVHWVHPWKSLAWFIALV 332          
BLAST of mRNA_Ecto-sp13_S_contig1724.5115.1 vs. uniprot
Match: A0A6H5JW30_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW30_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.700e-21
Identity = 53/116 (45.69%), Postives = 74/116 (63.79%), Query Frame = 0
Query:  129 FGRKGRSMGPS-DHSHQSEQEARACDLCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKTVFSPNQLYRKGMVFWEMFRPYMTFFKEVDAIDSWGRPRRSLMWMLAVV 243
             GRKG +     DH H   +E+ +C+ CIE RRKRFGEVRL L  +++EFAE CSH WPEEP +P +  FSPN++Y   M+  ++ +PY+   +   AI  W  P +SL W +A+V
Sbjct:  248 LGRKGATAEDRIDHDHGPREESPSCEACIEVRRKRFGEVRLQLRVEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQGASAIVHWVHPWKSLAWFVALV 363          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1724.5115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JRL3_9PHAE0.000e+079.53C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FL70_ECTSI2.170e-19960.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4V0_ECTSI2.550e-2346.55Protein kinase C, beta 1, like n=1 Tax=Ectocarpus ... [more]
A0A6H5JW30_9PHAE2.700e-2145.69C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 18..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1053..1073
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1034..1052
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 650..670
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1074..1136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 671..675
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 694..1011
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 676..693
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 266..649
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1012..1033
NoneNo IPR availableTMHMMTMhelixcoord: 238..260
NoneNo IPR availableTMHMMTMhelixcoord: 720..742
NoneNo IPR availableTMHMMTMhelixcoord: 653..672
NoneNo IPR availableTMHMMTMhelixcoord: 1052..1074
NoneNo IPR availableTMHMMTMhelixcoord: 1015..1037

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1724contigEcto-sp13_S_contig1724:763..12964 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1724.5115.1mRNA_Ecto-sp13_S_contig1724.5115.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1724 757..15099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1724.5115.1 ID=prot_Ecto-sp13_S_contig1724.5115.1|Name=mRNA_Ecto-sp13_S_contig1724.5115.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1137bp
MDMWYVLEAPRGRATASRTSAERKLRRQEKQQQQQQQQQQQHEGQQRRRA
GASKGKGGEEEAMAVDGGGDMDTVDDADDNYDTNGDGGEINSPPESPIGL
GLDDGSGGANVGGYSASGGRQGSSTKLGFGRKGRSMGPSDHSHQSEQEAR
ACDLCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKTVFSPN
QLYRKGMVFWEMFRPYMTFFKEVDAIDSWGRPRRSLMWMLAVVAMLVVPP
VLIVVINGALMHIVVSAYLKRRSGGGGGGGIFGQDDGTDNATTTVTAAAA
TAATAAATTAAATATATDPTSSNSSPSSLATVPAATDERSSGGQDGGLST
SLLGTPWLGDSVGTGGGSRRQSLLFLPAAFASSPVSPARVGREGQEGGGG
GGQEEGGGDVGGGGEETTGVSMSMRSTSRSQWKSSTTLFSLSRTLTRGNR
GTPVRRRVSDPDPVTANAVGSATAGVALRNSSSAPSRTAPWRAKAPRSAP
PSTISTPTTMARTSIFPASSGAPQSPSTPRDLSVSNGAATSRNNVNTGAG
VGAGVSRDVVHAAGVAKGGMISAAGAGSKKIKKLLPVRGTRDPELRELYE
RLGSTKRVPAVVNQLGKVFFTKSGPSIQRGLDKMGMMLIKIRQRFHPLHA
RDLGVTLTALFAHMVLQLWLYLSGRFNLYFVLLVVGQSLSKLYKRWGKAL
VMGLKQARRSCRTRQALSHAMSAIAANAAAAVAAGAGGSVFATTPSSPTG
RRHPPSSPSTAAAAAMVIRNPFKFDAANPPAFAPPGTTPALEPHLNGDGP
QQQSTSSFFAASPAPSAVTRRRRGSVASSGSSGTAATSSGGLGGSYHDFS
GGGGAESDTATPRGRGGNVPSLSVLVSPPRARSIAVFRGSSSSSSRSGSG
SARPGAPDGSGRRQPNPESDVGGGGGGAGIEGQRRGGAGGGKPRRWSILR
GKRTKSGGGGGGGGGGGGGLAARGQEEADRDQGRVVRPTSPVPPRGGNPH
GVRARGKIRMRWGRVIGATVALVCGLAALSAVAGTFFSPPQESVEEPVPS
LAAMWQAVAVALSGMTAFFSFGGNGGLGEAAWRGAGTKMTTVWGSGRERL
WWEGASAPTGYEDDEGDANDHDEAASSTLPLSAVLK*
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