prot_Ecto-sp13_S_contig1721.5105.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1721.5105.1
Unique Nameprot_Ecto-sp13_S_contig1721.5105.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length727
Homology
BLAST of mRNA_Ecto-sp13_S_contig1721.5105.1 vs. uniprot
Match: A0A6H5KE12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE12_9PHAE)

HSP 1 Score: 817 bits (2110), Expect = 1.530e-288
Identity = 497/716 (69.41%), Postives = 511/716 (71.37%), Query Frame = 0
Query:    1 PTSAGSPRKKDFRSFTAVKKVAPLSPVGGGGTSPSAWSTQAFASPGGGGGAERRARLDVSPWRARKPGQGLSPRRQASPSSSPRSLAKGDWRRGPAGVRPSQAGASRSLSPLAGGRAAGFGKTSSVRFGRGKDPPGAGFGAGSRGASSSMRQVSQEEPASPLLSLIGXXXXXXXXXXXXRRPRATPSTLPSVNSGGGSGCGDATAVVAQDADGHEQATTAPPLCEDKLEEAVDEASGHGGITAGDGGASTAAAVVQMPESCGAEKEEASADADDDRANGKAEGGALFAERKEASGEGRAEGGACDGTAGLLTVETKDFGETSGCTAVFHNPAGAEHDDPLRPTLVVTSRPSPLRAQLQSPITQDPSPCTSDGLHFAVSDVIPPDGGPEGNEAEQLPPSPQATAAVVREDARPPLHGNGGGFKGHVPPGVRIVGRTAAGDQHGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCXXXXGTGPPRGGEVKLFVSTPTGEGDASDLSLWVTTRGSEEGGGEGAATSGDAAASPLPSPPSVRLSPAAVNSLEDDDPGIDAGDGASTAVDLEEEDLEKDFRNGLGFGAQNALETRSDDGEGGVSGEVENEAEVLLEEEGATRCLLQPSERPEVAEEAGGDNEDPETAVSQGEVENAAEGLSGADAPLLDSSKKIPLTTAKTAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPP 716
            PTSAGSPRKKDFRSFTAVKKVAPLSPVGGGGTSPSAWSTQAF SPGGGGGAERR RLD+S WRAR PGQGLSP RQ  PSSSPRSLAKGDWRRGPAGVRP QAGASRSLSPL+GG AA FGKTSSVR                             EP   L                                               + DG EQAT APPLC+ K EEA DEASG GG TAGDG       VVQ PESCGAEKEEASADADD RANGKAE GALFAE +EASGEGRAEG A DGTAGLLTVETKDFGETSGCTAV +NPAG EHDDPLRPTLVVTS PSPLRAQLQSPITQDPSPCTSD LHFAVSD IPPDGGP G+ A QLPPSPQATAA VRED+R                GVRIVGRTAAG+Q GA  XXXXXXXXXXX                       C    GTGPPRGGEVKLFVSTPTGEGD+SDLSLWVTTRGS                SPLPSPPSVRLSP AV SLEDDDPGID GDGASTA +LEEEDLEKD RNGLGFGA+NA+E RS DGE G SGE ENE EVL E E AT CLLQPSE PE AEE GGDNEDPE AVSQGEVENAAEG S AD PLLDSSK IP TTA+TAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPP
Sbjct:   90 PTSAGSPRKKDFRSFTAVKKVAPLSPVGGGGTSPSAWSTQAFTSPGGGGGAERRGRLDLSSWRARTPGQGLSPPRQGPPSSSPRSLAKGDWRRGPAGVRPGQAGASRSLSPLSGGTAACFGKTSSVR-----------------------------EPRCKLFD---------------------------------------------ETDGLEQATMAPPLCDGKPEEAADEASGDGGFTAGDGXXXXXXXVVQ-PESCGAEKEEASADADDGRANGKAERGALFAEWEEASGEGRAEGYASDGTAGLLTVETKDFGETSGCTAVVNNPAGVEHDDPLRPTLVVTSSPSPLRAQLQSPITQDPSPCTSDSLHFAVSDGIPPDGGPGGDAAGQLPPSPQATAAAVREDSRXXXXXXXXXXXXXXXXGVRIVGRTAAGEQPGAASXXXXXXXXXXXAGEAPAGRRDRAALSSSPSSV--CSEGGGTGPPRGGEVKLFVSTPTGEGDSSDLSLWVTTRGSXXXXXXXXXXXXXXXXSPLPSPPSVRLSPVAVKSLEDDDPGIDPGDGASTAANLEEEDLEKDLRNGLGFGAKNAIEARSGDGEAGASGEEENEVEVLPEGE-ATCCLLQPSEGPEAAEEGGGDNEDPEPAVSQGEVENAAEGPSRADVPLLDSSKTIPSTTAETAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPP 727          
BLAST of mRNA_Ecto-sp13_S_contig1721.5105.1 vs. uniprot
Match: D8LEU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEU0_ECTSI)

HSP 1 Score: 736 bits (1899), Expect = 1.760e-255
Identity = 455/689 (66.04%), Postives = 471/689 (68.36%), Query Frame = 0
Query:   40 QAFASPGGGGGAERRARLDVSPWRARKPGQGLSPRRQASPSSSPRSLAKGDWRRGPAGVRPSQAGASRSLSPLAGGRAAGFGKTSSVRFGRGKDPPGAGFGAGSRGASSSMRQVSQEEPASPLLSLIGXXXXXXXXXXXXRRPRATPSTLPSVNSGGGSGCGDATAVVAQDADGHEQATTAPPLCEDKLEEAVDEASGHGGITAGDGGASTAAAVVQMPESCGAEKEEASADADDDRANGKAEGGALFAERKEASGEGRAEGGACDGTAGLLTVETKDFGETSGCTAVFHNPAGAEHDDPLRPTLVVTSRPSPLRAQLQSPITQDPSPCTSDGLHFAVSDVIPPDGGPEGNEAEQLPPSPQATAAVVREDARPPLHGNGGGFKGHVPPGVRIVGRTAAGDQHGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--CXXXXGTGPPRGGEVKLFVSTPTGEGDASDLSLWVTTRGSEEGGGEGAATSGDAAASPLPSPPSVRLSPAAVNSLEDDDPGIDAGDGASTAVDLEEEDLEKDFRNGLGFGAQNALETRSDDGEGGVSGEVENEAEVLLEEEGATRCLLQPSERPEVAEEAGGDNEDPETAVSQGEVENAAEGLSGADAPLLDSSKKIPLTTAKTAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPPGGEGRQGGKR 726
            +AF SPGGGGGAERR RLD+SPWRARKPGQGLSP RQASPSSSPRSLAKGDWRRGPAGVRP QAGASRSLSPLAGGRAAGFGKTSS+RFGRG DP GAGFGAGSRGASSS RQ                                                                                                        MPESC AE+EEA  DADDD ANGK EGGAL AER+E SGEGRAEG A DGTAGLLTVETKDFGE SG T V +NPAGAEHDDPLRPTLVVT+RPSPLRAQLQSPITQDPSPCTSDGLHFA+SD IPPDGGP G+ A +LPPSPQAT AVVRE  RPPLHGN         PGVRIVGRTAAG Q GAXXXXXXXXXXXXXXX                       C XXX                           LWVTTRGSEEGGGEGAAT GD AASPLPSP SVRLSP A  SLEDDDPGIDAGDGAS AVDLEEE  EKD  NGLG GA+N LE RS DGEGG SGE ENEAEVLLEEEGATRCLLQPSE PE AEEAGGDNEDPETAVSQGEVE+AAE LSGA+ PLLDSSK IP TTA+TAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPPGGEG Q G++
Sbjct:  218 EAFTSPGGGGGAERRGRLDLSPWRARKPGQGLSPPRQASPSSSPRSLAKGDWRRGPAGVRPGQAGASRSLSPLAGGRAAGFGKTSSMRFGRGIDPLGAGFGAGSRGASSSTRQ--------------------------------------------------------------------------------------------------------MPESCAAEREEAEVDADDDGANGKEEGGALLAEREEVSGEGRAEGNASDGTAGLLTVETKDFGEMSGGTTVVNNPAGAEHDDPLRPTLVVTARPSPLRAQLQSPITQDPSPCTSDGLHFAISDGIPPDGGPGGDAAGRLPPSPQATGAVVREGPRPPLHGNXXXXXXXXXPGVRIVGRTAAGKQAGAXXXXXXXXXXXXXXXALAGEAPTGRRDRSALSSSPSSVCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWVTTRGSEEGGGEGAATPGDGAASPLPSPLSVRLSPVAAKSLEDDDPGIDAGDGASNAVDLEEEVFEKDLENGLGLGAKNGLEARSGDGEGGASGEAENEAEVLLEEEGATRCLLQPSEGPEAAEEAGGDNEDPETAVSQGEVESAAESLSGAEVPLLDSSKTIPSTTAETAANVEKTEVGGMEGPWEAVARVFCGIFNFCRPPGGEGGQRGEK 802          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1721.5105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KE12_9PHAE1.530e-28869.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEU0_ECTSI1.760e-25566.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1721contigEcto-sp13_S_contig1721:3..3121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1721.5105.1mRNA_Ecto-sp13_S_contig1721.5105.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1721 3..3121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1721.5105.1 ID=prot_Ecto-sp13_S_contig1721.5105.1|Name=mRNA_Ecto-sp13_S_contig1721.5105.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=727bp
PTSAGSPRKKDFRSFTAVKKVAPLSPVGGGGTSPSAWSTQAFASPGGGGG
AERRARLDVSPWRARKPGQGLSPRRQASPSSSPRSLAKGDWRRGPAGVRP
SQAGASRSLSPLAGGRAAGFGKTSSVRFGRGKDPPGAGFGAGSRGASSSM
RQVSQEEPASPLLSLIGGNSSSSSSSGGGRRPRATPSTLPSVNSGGGSGC
GDATAVVAQDADGHEQATTAPPLCEDKLEEAVDEASGHGGITAGDGGAST
AAAVVQMPESCGAEKEEASADADDDRANGKAEGGALFAERKEASGEGRAE
GGACDGTAGLLTVETKDFGETSGCTAVFHNPAGAEHDDPLRPTLVVTSRP
SPLRAQLQSPITQDPSPCTSDGLHFAVSDVIPPDGGPEGNEAEQLPPSPQ
ATAAVVREDARPPLHGNGGGFKGHVPPGVRIVGRTAAGDQHGAASGGGSD
GGGGGGALAGEAPAGRRDRTTSSSSPSSVCSEGGGTGPPRGGEVKLFVST
PTGEGDASDLSLWVTTRGSEEGGGEGAATSGDAAASPLPSPPSVRLSPAA
VNSLEDDDPGIDAGDGASTAVDLEEEDLEKDFRNGLGFGAQNALETRSDD
GEGGVSGEVENEAEVLLEEEGATRCLLQPSERPEVAEEAGGDNEDPETAV
SQGEVENAAEGLSGADAPLLDSSKKIPLTTAKTAANVEKTEVGGMEGPWE
AVARVFCGIFNFCRPPGGEGRQGGKR*
back to top