mRNA_Ecto-sp13_S_contig17126.5057.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Match: D7FK99_ECTSI (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK99_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 2.150e-147 Identity = 203/217 (93.55%), Postives = 209/217 (96.31%), Query Frame = 1
Query: 1 GVSPSTKTPPDTGDFVADDLPFFSTRTNNFFIPDVNHQKGIQCRFGARGIIAESHFDHGKNFVIMLRGRKRYLLNPPRACPSLGIITEKAHPSFRHSDIDWSDESDWPEGFADAPALETVLEAGELLYIPSFWYHYIVSEGFNAQCNARSGLSLRKQWVDETESCMGRELNPDNVVDRLKRSKNKGGGGIEGMAARLGRGGRGKGQGHRERAEKRGQ 651
GV PS KTPPDTGDFVADDLPFFST TNNFFIPDV+HQKGIQCRFGARGIIAESHFDHGKNFV MLRGRKRYL+NPPRACPSLGIITE+AHPSFRHSDIDWSDESDWPEGFADAPALETVLEAGELLYIPSFWYHYIVSEGFN QCNARSGLSLRKQWVDETESCMGRELNPD +VD L+RSKNKGGGG+EGMAARLGRGGRGK QGHRERAEKRGQ
Sbjct: 104 GVKPSMKTPPDTGDFVADDLPFFSTSTNNFFIPDVSHQKGIQCRFGARGIIAESHFDHGKNFVFMLRGRKRYLMNPPRACPSLGIITERAHPSFRHSDIDWSDESDWPEGFADAPALETVLEAGELLYIPSFWYHYIVSEGFNVQCNARSGLSLRKQWVDETESCMGRELNPDKMVDLLRRSKNKGGGGMEGMAARLGRGGRGKEQGHRERAEKRGQ 320
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Match: A0A7S2CWZ0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CWZ0_9STRA) HSP 1 Score: 196 bits (498), Expect = 7.190e-60 Identity = 86/160 (53.75%), Postives = 112/160 (70.00%), Query Frame = 1
Query: 37 GDFVADDLPFFSTRTNNFFIPDVNHQKGIQCRFGARGIIAESHFDHGKNFVIMLRGRKRYLLNPPRACPSLGIITEKAHPSFRHSDIDWSDESDWPEGFADAPALETVLEAGELLYIPSFWYHYIVSEGFNAQCNARSGLSLRKQWVDETESCMGRELNP 516
G F++ DL FST NNFFI DV KGIQCRFG RG+IAE+H+D G+N V ML+G KRY+L PP+ C L II ++ HPS+RHS++DWSD FA A++T+L GE+LYIPSFW+HYI+S+ ++ QCN+RSG +Q E E CMG +P
Sbjct: 60 GQFISSDLGIFSTTRNNFFITDVKKNKGIQCRFGMRGVIAEAHYDSGRNMVAMLKGAKRYILAPPKECERLAIIKDRGHPSYRHSEVDWSDPKFVKNNFAGIDAIDTILRKGEVLYIPSFWFHYIISQDYSIQCNSRSGSPPHQQGAKEIEKCMGAGSHP 219
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Match: A0A8J2SRP3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRP3_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.440e-50 Identity = 86/171 (50.29%), Postives = 108/171 (63.16%), Query Frame = 1
Query: 43 FVADDLPFFSTRTNNFFIPDVNHQKGIQCRFGARGIIAESHFDHGKNFVIMLRGRKRYLLNPPRACPSLGIITEKAHPSFRHSDIDWSDESDWPEGFAD--APALETVLEAGELLYIPSFWYHYIVSEGFNAQCNARSGLSLRKQWVDETESCMGRELNPDNVVDRLKRSK 549
FV DLP F+ T NFF+ D+ KGIQCRFG RG+IAE+H+D G+N V MLRG KRY+L PP +C L +I ++ HPSFRHS+IDWS E F+ A A++TVL GE+LYIPS+W HYI S ++ QCN RSG + CMG E P LK+ K
Sbjct: 270 FVTKDLPCFTPGTENFFVTDIRKNKGIQCRFGMRGVIAEAHYDGGRNMVAMLRGAKRYILTPPTSCAHLNLIRDRKHPSFRHSEIDWSHEHQARSAFSPETAGAIDTVLREGEILYIPSYWIHYITSLKYSIQCNTRSGSPPNHDGEADIGRCMGGEGMPTAAKRPLKKKK 440
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Match: A0A7S0TF31_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TF31_9STRA) HSP 1 Score: 175 bits (443), Expect = 6.920e-50 Identity = 84/175 (48.00%), Postives = 113/175 (64.57%), Query Frame = 1
Query: 43 FVADDLPFFSTRTNNFFIPDVNHQKGIQCRFGARGIIAESHFDHGKNFVIMLRGRKRYLLNPPRACPSLGIITEKAHPSFRHSDIDWSDESDWPEGFADAPALETVLEAGELLYIPSFWYHYIVSEGFNAQCNARSGLSLRKQWVDETESCMGRELNPDNVVDRLKRSKNKGGGG 567
FV +DL F+ NFF+ + KGIQCRFG RG+IAE+H+D G+N V ML+G KRY+L PP +C L II ++ HPSFRHS DWS ++ E A A++TV+ GE+LYIPSFW HYI+S ++ QCN RSG +Q +E + C+G+E V + L +GGGG
Sbjct: 183 FVTNDLEIFTPDQENFFVTNTAANKGIQCRFGMRGVIAEAHYDGGRNMVAMLKGAKRYILAPPSSCSHLTIIPDRRHPSFRHSTTDWSKPTEADEQLLRARAIDTVVREGEILYIPSFWIHYIISLKYSIQCNTRSGAPPNRQGEEEVQRCVGQENMNKRVSEELAT---RGGGG 354
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Match: A0A7S3JRJ1_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRJ1_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.720e-48 Identity = 81/166 (48.80%), Postives = 108/166 (65.06%), Query Frame = 1
Query: 43 FVADDLPFFSTRTNNFFIPDVNHQKGIQCRFGARGIIAESHFDHGKNFVIMLRGRKRYLLNPPRACPSLGIITEKAHPSFRHSDIDWSDESDWPEGFADAPALETVLEAGELLYIPSFWYHYIVSEGFNAQCNARSGLSLRKQWVDETESCMGRELNPDNVVDRLK 540
FV +DL F+ T NFFI ++ KGIQCRFG RG+IAE+H+D G+N V ML+G KRY+L+PP +C +L II ++ HPSFRHS DWS ++ A A++TVL GE+LYIPS+W HYIVS ++ QCN RSG Q + C+G E P ++ K
Sbjct: 295 FVNNDLSIFTPDTENFFITNIAANKGIQCRFGMRGVIAEAHYDGGRNMVAMLKGAKRYILSPPTSCSNLKIIPDRRHPSFRHSTTDWSHQNQADTQLNQAHAIDTVLREGEILYIPSYWIHYIVSLRYSIQCNTRSGSPPNGQGEQDVRDCVGEENVPARNAEKNK 460
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Match: A0A482SW15_9ARCH (JmjC domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SW15_9ARCH) HSP 1 Score: 172 bits (437), Expect = 2.290e-48 Identity = 77/155 (49.68%), Postives = 107/155 (69.03%), Query Frame = 1
Query: 43 FVADDLPFFSTRTNNFFIPDVNHQKGIQCRFGARGIIAESHFDHGKNFVIMLRGRKRYLLNPPRACPSLGIITEKAHPSFRHSDIDWSDESDWPEG-FADAPALETVLEAGELLYIPSFWYHYIVSEGFNAQCNARSGLSLRKQWVDETESCMGR 504
F++ DLP FST NNFFI +V KGIQCRFG RGIIAE+H+D GKN V M++G KRY++ PP C L I+++ HPS+RHS +DWSD + F + A++T++ GE+LYIPS+W+HYIVS ++ QCN+RSG ++ + SC +
Sbjct: 263 FISRDLPMFSTEENNFFITNVGANKGIQCRFGMRGIIAEAHYDSGKNMVAMIKGAKRYIITPPWTCDHLSILSDTKHPSYRHSVVDWSDLDQARQNKFHEVDAIDTIVHKGEVLYIPSYWFHYIVSLKYSIQCNSRSGAPPGRKGYEHIISCFAK 417
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Match: A0A7S3XZK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZK4_HETAK) HSP 1 Score: 159 bits (403), Expect = 1.440e-44 Identity = 75/139 (53.96%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 43 FVADDLPFFSTRTNN-FFIPDVNHQKGIQCRFGARGIIAESHFDHGKNFVIMLRGRKRYLLNPPRACPSLGIITEKAHPSFRHSDIDWSDESDWPEG-FADAPALETVLEAGELLYIPSFWYHYIVSEGFNAQCNARSG 453
F+ +DL FS + FF+ D +GIQCRFG RG+IAE+H+D G+NF+ MLRG KRY+L PP +C L +I ++AHPSFRHS IDWSD + F +++TVL+ GELLY+PS W+HYIVS F+ QCN+RSG
Sbjct: 139 FIENDLNIFSIANGSTFFVSDTAGNRGIQCRFGMRGVIAEAHYDVGRNFIAMLRGSKRYILTPPSSCTMLDLIKDRAHPSFRHSRIDWSDLGAAAKANFTSVQSVQTVLKQGELLYMPSCWFHYIVSLDFSIQCNSRSG 277
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Match: A0A7S3L462_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L462_9STRA) HSP 1 Score: 165 bits (417), Expect = 6.560e-44 Identity = 81/166 (48.80%), Postives = 107/166 (64.46%), Query Frame = 1
Query: 25 PPDTGDFVADDLPFFSTRTNNFFIPDVNHQKGIQCRFGARGIIAESHFDHGKNFVIMLRGRKRYLLNPPRACPSLGIITEKAHPSFRHSDIDWS----------------DESDWPEGFADAPALETVLEAGELLYIPSFWYHYIVSEGFNAQCNARSGLSLRKQW 474
P D F++ DLP FS NF + + + QKGIQCRFG RG++A +H+D G+N V M+ G KRY+L+PP AC LGI +K P FRHS +++ +E +W E A APA+ETVL+AGE+LYIPSFW+HYIVS +AQCNARSG+ + W
Sbjct: 478 PQDQWSFISRDLPSFSATEPNFIMFNPDEQKGIQCRFGERGVVAATHYDSGRNMVGMITGAKRYILSPPNACGKLGIFPDKNSPIFRHSLLNFGHIKYLNDPEKGEGMSDEEREWLERAATAPAVETVLKAGEVLYIPSFWFHYIVSVQKSAQCNARSGVETDRHW 643
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Match: B8BRZ2_THAPS (JmjC domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRZ2_THAPS) HSP 1 Score: 162 bits (411), Expect = 2.100e-43 Identity = 82/180 (45.56%), Postives = 113/180 (62.78%), Query Frame = 1
Query: 19 KTPPDTGDFVADDLPFFSTRTNNFFIPDVNHQKGIQCRFGARGIIAESHFDHGKNFVIMLRGRKRYLLNPPRACPSLGIITEKAHPSFRHS--------------DIDWSD-ESDWPEGFADAPALETVLEAGELLYIPSFWYHYIVSEGFNAQCNARSGL----SLRKQWVDETESCMG 501
K P FV+ DLP FS FF + QKGIQCRFG RG+ A +H+D G+N + M+ G KRY+L+PP ACP LG++T + HPS+RHS DID S+ E +W + A+AP L TVL+AGE+LY+PS W+HYIVS +AQCN RSG+ ++ +++ + C+G
Sbjct: 399 KKEPKLWSFVSKDLPSFSNPHPTFFGFNPKEQKGIQCRFGERGVTAATHYDGGRNMIAMMTGAKRYILSPPNACPKLGVVTARRHPSYRHSMLNFGRVTILDSETDIDMSEREREWLKISAEAPTLSTVLKAGEVLYVPSHWFHYIVSLQKSAQCNTRSGIHEEGNINFGGLEDVQECIG 578
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Match: A0A7S2YAF1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YAF1_9STRA) HSP 1 Score: 153 bits (387), Expect = 4.570e-43 Identity = 80/185 (43.24%), Postives = 110/185 (59.46%), Query Frame = 1
Query: 25 PPDTGDFVADDLPFFSTRTN-NFFIPDVNHQKGIQCRFGARGIIAESHFDHGKNFVIMLRGRKRYLLNPPRACPSLGIITEKAHPSFRHSDIDWS---------------------DESDWPEGFADAPALETVLEAGELLYIPSFWYHYIVSEGFNAQCNARSGLSLRKQ----WVDETESCMG 501
PP F++ DL T NFF+ + QKGIQCRFG RG+ A +HFD G+N + ML G KRY+L+PP+ACPSLG+ + P FRHS ++++ +E +W E A APALETV++AGE+L++PSFW+HYIVS +AQCN RSG+ + + V + C G
Sbjct: 17 PPHQQSFISRDLQTTLGATEENFFVFHIQEQKGIQCRFGERGVTAATHFDAGQNMIAMLTGAKRYILSPPKACPSLGVFNTRESPIFRHSLLNFAHLEHLSHAHNYTNAHGEKMSPEEREWLEKAAQAPALETVVKAGEVLFLPSFWFHYIVSLQKSAQCNVRSGIDKQGRPDFGGVTDINHCSG 201 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17126.5057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig17126.5057.1 >prot_Ecto-sp13_S_contig17126.5057.1 ID=prot_Ecto-sp13_S_contig17126.5057.1|Name=mRNA_Ecto-sp13_S_contig17126.5057.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=217bp GVSPSTKTPPDTGDFVADDLPFFSTRTNNFFIPDVNHQKGIQCRFGARGIback to top mRNA from alignment at Ecto-sp13_S_contig17126:357..2987+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig17126.5057.1 ID=mRNA_Ecto-sp13_S_contig17126.5057.1|Name=mRNA_Ecto-sp13_S_contig17126.5057.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2631bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17126:357..2987+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig17126:357..2987+ >mRNA_Ecto-sp13_S_contig17126.5057.1 ID=mRNA_Ecto-sp13_S_contig17126.5057.1|Name=mRNA_Ecto-sp13_S_contig17126.5057.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=651bp|location=Sequence derived from alignment at Ecto-sp13_S_contig17126:357..2987+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |