prot_Ecto-sp13_S_contig9971.21620.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9971.21620.1
Unique Nameprot_Ecto-sp13_S_contig9971.21620.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length182
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9971.21620.1 vs. uniprot
Match: A0A6H5L3M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3M6_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.790e-74
Identity = 132/161 (81.99%), Postives = 138/161 (85.71%), Query Frame = 0 
Query:   24 DIVPATPRSKSQIPRVSLQERLLAALESAELPQIQRRGGKSSXXXXXXXXXXX--AVDKSRPQLPEXXXXXXHETQAVLSPTRCSHLSKPVGDVGRGGHAMGAVGVQVTAMTEPSGPRKCGHEGGAFLSNEAVRGDVRRAILADVQLRTEVRKVLLDQANG 182
            DIVPATPRSKSQIPRVSLQERLLAALESAELPQIQRRGG+ S XXXXXX      A DKSRPQL E       +TQ VLSPTRCSHLSKPVGDVGRGGHAMGAVG +VTA+ EPSGPRKCGHE GA+LSNE VRGDVRRAILADVQLRTEVRK LLDQA+G
Sbjct:   24 DIVPATPRSKSQIPRVSLQERLLAALESAELPQIQRRGGEKSSXXXXXXKPCTSSAADKSRPQLQEQQQLQ-QKTQTVLSPTRCSHLSKPVGDVGRGGHAMGAVGEKVTAVAEPSGPRKCGHERGAYLSNEIVRGDVRRAILADVQLRTEVRKALLDQASG 183
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9971.21620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L3M6_9PHAE1.790e-7481.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9971contigEcto-sp13_S_contig9971:3404..4704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9971.21620.1mRNA_Ecto-sp13_S_contig9971.21620.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9971 3404..4706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9971.21620.1 ID=prot_Ecto-sp13_S_contig9971.21620.1|Name=mRNA_Ecto-sp13_S_contig9971.21620.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=182bp
GRRRVATTAVATTTRGRKATVGSDIVPATPRSKSQIPRVSLQERLLAALE
SAELPQIQRRGGKSSSSSKSKPSTSSAVDKSRPQLPEQQQQQQHETQAVL
SPTRCSHLSKPVGDVGRGGHAMGAVGVQVTAMTEPSGPRKCGHEGGAFLS
NEAVRGDVRRAILADVQLRTEVRKVLLDQANG
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