Homology
BLAST of mRNA_Ecto-sp13_S_contig9971.21619.1 vs. uniprot
Match:
D7G205_ECTSI (HMMR_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G205_ECTSI)
HSP 1 Score: 167 bits (422), Expect = 6.340e-46
Identity = 93/99 (93.94%), Postives = 93/99 (93.94%), Query Frame = 0
Query: 1 RLASENAALVGHNNNKQKIKHLQNLKKESIRLQNEKARQASDLALAIAVLEAVGVLPKEVETTSNAVAVKRRGRGLHSRRSSGANSLSPARFNRLEAHG 99
RLASENAALVGHNNNKQKIKHLQNLKKESIRLQNEKARQASDLALAIAVLEAVGVLPKE TTS AV KRRGRGLHSRRSSGANSLSPARF RLEAHG
Sbjct: 942 RLASENAALVGHNNNKQKIKHLQNLKKESIRLQNEKARQASDLALAIAVLEAVGVLPKEAGTTSTAVVAKRRGRGLHSRRSSGANSLSPARFKRLEAHG 1040
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9971.21619.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
R L A S E N A A L V G H N N N K Q K I K H L Q N L K K E S I R L Q N E K A R Q A S D L A L A I A V L E A V G V L P K E V E T T S N A V A V K R R G R G L H S R R S S G A N S L S P A R F N R L E A H G 10 20 30 40 50 60 70 80 90 Expect = 6.34e-46 / Id = 93.94 Sequence D7G205_ECTSI
Match Name E-value Identity Description
D7G205_ECTSI 6.340e-46 93.94 HMMR_C domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
R L A S E N A A L V G H N N N K Q K I K H L Q N L K K E S I R L Q N E K A R Q A S D L A L A I A V L E A V G V L P K E V E T T S N A V A V K R R G R G L H S R R S S G A N S L S P A R F N R L E A H G 10 20 30 40 50 60 70 80 90 Score = Expect = 3.6E-7 / Score = 30.6 Sequence Coil PF15908
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 15..42 IPR031794 Hyaluronan-mediated motility receptor, C-terminal PFAM PF15908 HMMR_C coord: 2..44
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig9971.21619.1 ID=prot_Ecto-sp13_S_contig9971.21619.1|Name=mRNA_Ecto-sp13_S_contig9971.21619.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=99bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR031794 HMMR_C