prot_Ecto-sp13_S_contig995.21596.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig995.21596.1
Unique Nameprot_Ecto-sp13_S_contig995.21596.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length362
Homology
BLAST of mRNA_Ecto-sp13_S_contig995.21596.1 vs. uniprot
Match: A0A6H5JGX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX4_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 6.320e-154
Identity = 306/344 (88.95%), Postives = 311/344 (90.41%), Query Frame = 0
Query:   18 HVPRPQLPSPVDSARVDGEGRRRSLSPRKSPANGNVTDPPTPATEVGSRSRLRLRKYNNPAPPSAHVPQQTNPAPTLKREEGSARAIDSRAKTCDQVEVDGSKCLRRPSFGFPGDKRASRCASHKLEGQEDVTSRRCDEEGCSRIPSFRKPGGNSRIRFCAAHKPPGYEDYHKGARSCRAAPGGSNACNRNSSFGFKGGKRTSCAQHKQKGMINLNTPRCQGPECYLTPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRIPSYNYDMVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGKAGGKTXXXXXXXXXXXXXDVVNNYQRQGKKRKARE 361
            HV   Q+P PVDSARVDGEGRRRSL PRK PANGNVTDPPTPATEVGSRSRLRLRKYNNPAPPSAHVPQQTNPAP LKREEGSARAI SR KTCDQ+E DGSKCLRRPSFGFPGDKRASRCASHKLEG ED+TSRRCD EGCSRIPS   PGGNSRIRF          DYHKGARSCR APGG NACNRNSSFGFKGGKR SCAQHKQKGMINLNTPRC+GPECYLTP+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRIPSYNYDMVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGKAGGKT XXXXXXXXX   DVVNNYQRQGKKRK RE
Sbjct:    2 HVHHRQMPPPVDSARVDGEGRRRSLRPRKHPANGNVTDPPTPATEVGSRSRLRLRKYNNPAPPSAHVPQQTNPAPNLKREEGSARAIGSRTKTCDQMEDDGSKCLRRPSFGFPGDKRASRCASHKLEGHEDITSRRCDGEGCSRIPSM--PGGNSRIRFXXXXXXXXXXDYHKGARSCRVAPGGFNACNRNSSFGFKGGKRISCAQHKQKGMINLNTPRCRGPECYLTPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRIPSYNYDMVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFGKAGGKTAXXXXXXXXXDMVDVVNNYQRQGKKRKGRE 343          
BLAST of mRNA_Ecto-sp13_S_contig995.21596.1 vs. uniprot
Match: A0A6H5JRD0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRD0_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 4.670e-56
Identity = 92/113 (81.42%), Postives = 98/113 (86.73%), Query Frame = 0
Query:   24 LPSPVDSARVDGEGRRRSLSPRKSPANGNVTDPPTPATEVGSRSRLRLRKYNNPAPPSAHVPQQTNPAPTLKREEGSARAIDSRAKTCDQVEVDGSKCLRRPSFGFPGDKRAS 136
            +P PVDSA VDGEGRRRSL PRK PAN N+TDPPTPATEVGSRS LRLRK NNPAPPSAHVPQQTN  P L+RE+GSARAI SR KTCDQVE DGSKCLRRPSFGFPG ++ S
Sbjct:    1 MPPPVDSAHVDGEGRRRSLRPRKHPANDNITDPPTPATEVGSRSCLRLRKCNNPAPPSAHVPQQTNTVPNLEREKGSARAIGSRTKTCDQVEDDGSKCLRRPSFGFPGTRQES 113          
BLAST of mRNA_Ecto-sp13_S_contig995.21596.1 vs. uniprot
Match: A0A6H5JA62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA62_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.150e-7
Identity = 46/156 (29.49%), Postives = 69/156 (44.23%), Query Frame = 0
Query:   87 QTNPAPTLKREEGSARAIDSRAKTCDQVEVDGSKCLRRPSFGFPGDKRASRCASHKLEGQEDVTSRRCDEEG--CSRIPSFRKPGGNSRIRFCAAHKPPGYEDYHKGARSCRAAPGGSNACNRNSSFGFKGGKRTSCAQHKQKGMINLNTPRCQGP 240
            +TNP+    R  G ++A++ +  T   +  +   C +  SF   G  R   C  H   G ++V  + CD +   C    S+   G   ++R C  H  P   +       C+   GG   C+R SSFG KGGK   C  HK  GM+ + T  C+ P
Sbjct:   95 KTNPS----RGGGKSKAMNGKKSTGALLTCESPLCNKTSSFAHRGQTRRRLCKRHAWPGMQNVYYKYCDADSGRCPERASYESAG---KLR-CLEHCEP---EMRPRNNICQVEGGG---CDRQSSFGVKGGKPILCTLHKGAGMVQVRTKTCRHP 236          
BLAST of mRNA_Ecto-sp13_S_contig995.21596.1 vs. uniprot
Match: D8LBM0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBM0_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.470e-6
Identity = 41/142 (28.87%), Postives = 62/142 (43.66%), Query Frame = 0
Query:  101 ARAIDSRAKTCDQVEVDGSKCLRRPSFGFPGDKRASRCASHKLEGQEDVTSRRCDEEG--CSRIPSFRKPGGNSRIRFCAAHKPPGYEDYHKGARSCRAAPGGSNACNRNSSFGFKGGKRTSCAQHKQKGMINLNTPRCQGP 240
            ++ ++ +  T   +  +   C + PSF   G  R   C  H   G ++V  + CD +   C    S+   G   ++R C  H  P   +       C+   GG   C+R SSFG KGGK   C  HK  GM+ + T  C+ P
Sbjct:   34 SKTMNGKNSTGALLTCESPLCNKTPSFAHRGQTRRRFCKRHAWPGMQNVYYKYCDADSGRCPERASYESAG---KLR-CLQHCEP---EMRPRNNICQVEGGG---CDRQSSFGAKGGKPVLCTLHKGAGMVQVRTKTCRHP 165          
BLAST of mRNA_Ecto-sp13_S_contig995.21596.1 vs. uniprot
Match: A0A6H5JKV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKV8_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 2.020e-5
Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = 0
Query:  121 CLRRPSFGFPGDKRASRCASHKLEGQEDVTSRRCDE---EGCSRIPSFRKPGGNSRIRFCAAHKPPGYEDYHKGARSCRAAPGGSNACNRNSSFGF 213
            C +R + G P +  A+RCA+HK +GQ D   R C++   + C + PSF  PG  SR RFC+AH+P G  D     RSC  A      C   +S GF
Sbjct:  148 CGKRATHGPPAE--ATRCAAHKEKGQIDHKHRLCEDTTPKPCLKQPSFGWPG-ESRKRFCSAHRPAGTVDL----RSCEQA-----GCGTRASHGF 231          
BLAST of mRNA_Ecto-sp13_S_contig995.21596.1 vs. uniprot
Match: D8LRL1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL1_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 9.820e-5
Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 0
Query:  121 CLRRPSFGFPGDKRASRCASHKLEGQEDVTSRRCDE---EGCSRIPSFRKPGGNSRIRFCAAHKPPGYEDYHKGARSCRAAPGGSNACNRNSSFGF 213
            C +R + G P +  A+RCA+HK +GQ D   R C+    + C + PSF  PG  SR RFC+AH+P G  D     R+C  A      C   +S GF
Sbjct:  150 CGKRATHGPPAE--ATRCAAHKEKGQIDHKHRLCENTTPKPCLKQPSFGWPG-ESRKRFCSAHRPAGTVDL----RNCEQA-----GCGTRASHGF 233          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig995.21596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JGX4_9PHAE6.320e-15488.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRD0_9PHAE4.670e-5681.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA62_9PHAE2.150e-729.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBM0_ECTSI1.470e-628.87EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JKV8_9PHAE2.020e-540.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRL1_ECTSI9.820e-539.58EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig995contigEcto-sp13_S_contig995:15467..18533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig995.21596.1mRNA_Ecto-sp13_S_contig995.21596.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig995 14706..19335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig995.21596.1 ID=prot_Ecto-sp13_S_contig995.21596.1|Name=mRNA_Ecto-sp13_S_contig995.21596.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=362bp
MDVAPLTDLPRLAAPATHVPRPQLPSPVDSARVDGEGRRRSLSPRKSPAN
GNVTDPPTPATEVGSRSRLRLRKYNNPAPPSAHVPQQTNPAPTLKREEGS
ARAIDSRAKTCDQVEVDGSKCLRRPSFGFPGDKRASRCASHKLEGQEDVT
SRRCDEEGCSRIPSFRKPGGNSRIRFCAAHKPPGYEDYHKGARSCRAAPG
GSNACNRNSSFGFKGGKRTSCAQHKQKGMINLNTPRCQGPECYLTPHFGL
RGATPTYCSKHKQEGMINVISKRCADESCDRIPSYNYDMVGAKAVYCNAH
KAEGMVNVRHRRCADPDCKRQPSFGKAGGKTAVYCVVHKEPNMVDVVNNY
QRQGKKRKARE*
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