Homology
BLAST of mRNA_Ecto-sp13_S_contig99025.21547.1 vs. uniprot
Match:
A0A6H5J7D4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7D4_9PHAE)
HSP 1 Score: 104 bits (259), Expect = 8.920e-25
Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
Query: 1 MVAPVRETAAQLLAVAALQLEADKLRQVARLLFELTASGEWQARHGGFCSLESLCA 56
MVAPVRETAAQLLAVAALQLEADKLRQ ARLLFELTASGEWQARHGGFCSLESLCA
Sbjct: 1 MVAPVRETAAQLLAVAALQLEADKLRQAARLLFELTASGEWQARHGGFCSLESLCA 56
BLAST of mRNA_Ecto-sp13_S_contig99025.21547.1 vs. uniprot
Match:
D8LBB5_ECTSI (Essential abundant protein involved in regulation of transcription n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB5_ECTSI)
HSP 1 Score: 104 bits (259), Expect = 1.030e-24
Identity = 55/56 (98.21%), Postives = 55/56 (98.21%), Query Frame = 0
Query: 1 MVAPVRETAAQLLAVAALQLEADKLRQVARLLFELTASGEWQARHGGFCSLESLCA 56
MVAPVRETAAQLLAVAALQLEADKLRQ ARLLFELTASGEWQARHGGFCSLESLCA
Sbjct: 402 MVAPVRETAAQLLAVAALQLEADKLRQAARLLFELTASGEWQARHGGFCSLESLCA 457
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig99025.21547.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
M V A P V R E T A A Q L L A V A A L Q L E A D K L R Q V A R L L F E L T A S G E W Q A R H G G F C S L E S L C A 5 10 15 20 25 30 35 40 45 50 55 Expect = 8.92e-25 / Id = 98.21 Expect = 1.03e-24 / Id = 98.21 Sequence A0A6H5J7D4_9PHAE D8LBB5_ECTSI
Match Name E-value Identity Description
A0A6H5J7D4_9PHAE 8.920e-25 98.21 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D8LBB5_ECTSI 1.030e-24 98.21 Essential abundant protein involved in regulation ... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M V A P V R E T A A Q L L A V A A L Q L E A D K L R Q V A R L L F E L T A S G E W Q A R H G G F C S L E S L C A 5 10 15 20 25 30 35 40 45 50 55 Score = Score = Score = Score = Score = Sequence NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE SIGNAL_PEPTIDE_N_REGION SIGNAL_PEPTIDE_H_REGION
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 23..56 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 19..22 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..22 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..7 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 8..18
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig99025.21547.1 ID=prot_Ecto-sp13_S_contig99025.21547.1|Name=mRNA_Ecto-sp13_S_contig99025.21547.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp back to top