Homology
BLAST of mRNA_Ecto-sp13_S_contig98712.21516.1 vs. uniprot
Match:
A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE)
HSP 1 Score: 67.0 bits (162), Expect = 3.330e-10
Identity = 49/131 (37.40%), Postives = 60/131 (45.80%), Query Frame = 0
Query: 14 DGGAILAW-DAVVSWDRNTTXXXXXXXGNGGGIAFVDLGKREYVLDSEMSTLYFSAAGFVNNSATNAGALFLSNSDYDFNFTDLSFQNNRASYAGGAVAAYDIGRIW---PMTFSRCAFLDXXXXXXXGAV 140
DGGA+ W +VVSW+ T NGGG+ + DS + A F+NN A GAL+LS + FNF F+NN A GGAVA Y G P+ F C FLD GAV
Sbjct: 286 DGGAVSTWFSSVVSWNGTATFENNEAGVNGGGL---HANGCDSTSDSGGEVGEAAGATFINNRANFGGALYLSTCENAFNFAQFVFENNSA-LDGGAVAVYQSGSETFGLPVVFFECTFLDNVASGNGGAV 412
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig98712.21516.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
G Q G T Q F S S N Y A N G D G G A I L A W D A V V S W D R N T T F S N N V V G G N G G G I A F V D L G K R E Y V L D S E M S T L Y F S A A G F V N N S A T N A G A L F L S N S D Y D F N F T D L S F Q N N R A S Y A G G A V A A Y D I G R I W P M T F S R C A F L D N V A S V A G G A V 20 40 60 80 100 120 140 Expect = 3.33e-10 / Id = 37.40 Sequence A0A6H5KX12_9PHAE
Match Name E-value Identity Description
A0A6H5KX12_9PHAE 3.330e-10 37.40 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
G Q G T Q F S S N Y A N G D G G A I L A W D A V V S W D R N T T F S N N V V G G N G G G I A F V D L G K R E Y V L D S E M S T L Y F S A A G F V N N S A T N A G A L F L S N S D Y D F N F T D L S F Q N N R A S Y A G G A V A A Y D I G R I W P M T F S R C A F L D N V A S V A G G A V 20 40 60 80 100 120 140 Expect = 0.15 / Score = 12.6 Expect = 2.3E-4 / Score = 18.9 Expect = 0.0023 / Score = 15.7 Score = Sequence PF02415 TIGR01376 SSF51126
IPR Term IPR Description Source Source Term Source Description Alignment
IPR003368 Polymorphic outer membrane protein repeat PFAM PF02415 Chlam_PMP coord: 5..20 IPR003368 Polymorphic outer membrane protein repeat TIGRFAM TIGR01376 TIGR01376 coord: 92..112 IPR011050 Pectin lyase fold/virulence factor SUPERFAMILY 51126 Pectin lyase-like coord: 6..139
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig98712.21516.1 ID=prot_Ecto-sp13_S_contig98712.21516.1|Name=mRNA_Ecto-sp13_S_contig98712.21516.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR003368 POMP_repeat IPR011050 Pectin_lyase_fold/virulence