Homology
BLAST of mRNA_Ecto-sp13_S_contig9835.21482.1 vs. uniprot
Match:
A0A6H5L3W9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3W9_9PHAE)
HSP 1 Score: 375 bits (963), Expect = 3.310e-129
Identity = 229/261 (87.74%), Postives = 240/261 (91.95%), Query Frame = 0
Query: 1 MADTMTTALYIIVLAAWFCLMCFILRCCSEGEPQTLFFDLDPDMNLAVAGRKPSVTAVVDGEPARFARVQVLGAAATAEEGKGGTRYEDLTLDGLEMPAVTGRTAAAGDDLPAAQEVWSPILALRTFVEPLTSRASAAFRNFHVSFFDGQEEVGGVVTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-APEAVRVASAERCWPAVPGGIEVADVSDGHERATAAERERAAREGEEEVKVADAGEMSSDGDLQDSHRVAV 260
MADTMTTALYIIVL AWFCLMC ILRCCS+GEP TLFFDLDP+++L AG KPSVTAVVDGEPARFARVQ+LG AATAEEGKGGTR+EDLTLDGLE+PAV GRTAAAGDDLPAAQEVWSPILALRTFVEPLTSRASAAFRNFHVSFFDGQEEVG VVTG XXXXXXXXXXXXXXXXXXXXXXXX APEAVRVASAE+ WPAVP GI+VADVS+GHERA AAERERAA E EEEVKVADAGEM+SDGDLQDSHRVAV
Sbjct: 1 MADTMTTALYIIVLTAWFCLMCVILRCCSDGEPPTLFFDLDPEIDLTGAGPKPSVTAVVDGEPARFARVQILGTAATAEEGKGGTRHEDLTLDGLEVPAVMGRTAAAGDDLPAAQEVWSPILALRTFVEPLTSRASAAFRNFHVSFFDGQEEVGKVVTGGASGDGXXXXXXXXXXXXXXXXXXXXXXXXXAPEAVRVASAEQSWPAVPRGIDVADVSNGHERAAAAERERAAGE-EEEVKVADAGEMTSDGDLQDSHRVAV 260
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9835.21482.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M A D T M T T A L Y I I V L A A W F C L M C F I L R C C S E G E P Q T L F F D L D P D M N L A V A G R K P S V T A V V D G E P A R F A R V Q V L G A A A T A E E G K G G T R Y E D L T L D G L E M P A V T G R T A A A G D D L P A A Q E V W S P I L A L R T F V E P L T S R A S A A F R N F H V S F F D G Q E E V G G V V T G G A S G D G G M A A R A E E G R S S A A G T P S G G G G A A A P E A V R V A S A E R C W P A V P G G I E V A D V S D G H E R A T A A E R E R A A R E G E E E V K V A D A G E M S S D G D L Q D S H R V A V * 20 40 60 80 100 120 140 160 180 200 220 240 260 Expect = 3.31e-129 / Id = 87.74 Sequence A0A6H5L3W9_9PHAE
Match Name E-value Identity Description
A0A6H5L3W9_9PHAE 3.310e-129 87.74 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M A D T M T T A L Y I I V L A A W F C L M C F I L R C C S E G E P Q T L F F D L D P D M N L A V A G R K P S V T A V V D G E P A R F A R V Q V L G A A A T A E E G K G G T R Y E D L T L D G L E M P A V T G R T A A A G D D L P A A Q E V W S P I L A L R T F V E P L T S R A S A A F R N F H V S F F D G Q E E V G G V V T G G A S G D G G M A A R A E E G R S S A A G T P S G G G G A A A P E A V R V A S A E R C W P A V P G G I E V A D V S D G H E R A T A A E R E R A A R E G E E E V K V A D A G E M S S D G D L Q D S H R V A V * 20 40 60 80 100 120 140 160 180 200 220 240 260 Score = Score = Score = Score = 0.533 Score = Sequence CYTOPLASMIC_DOMAIN TRANSMEMBRANE NON_CYTOPLASMIC_DOMAIN SignalP-TM TMhelix
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 1..6 None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 7..26 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 27..260 None No IPR available SIGNALP_EUK SignalP-TM SignalP-TM coord: 1..29 None No IPR available TMHMM TMhelix coord: 7..29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig9835.21482.1 ID=prot_Ecto-sp13_S_contig9835.21482.1|Name=mRNA_Ecto-sp13_S_contig9835.21482.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=261bp back to top