Homology
BLAST of mRNA_Ecto-sp13_S_contig9795.21446.1 vs. uniprot
Match:
D7FGT3_ECTSI (ABC1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGT3_ECTSI)
HSP 1 Score: 166 bits (419), Expect = 7.270e-46
Identity = 93/96 (96.88%), Postives = 94/96 (97.92%), Query Frame = 0
Query: 1 MGRTLSGTAAVAVAVAAWANHVPSADAFSPAMIASTASAFGGPSSAVI-SRRQARSRRPSPSMKVAGAQPQQQDAWLAGGVKTRELFNALSQGEIG 95
MGRTLSGTAAVAVAVAAWANHVP ADAFSPAMIASTASAFGGPSSAVI SRRQARSRRPSPSMKVAGAQPQQQDAW+AGGVKTRELFNALSQGEIG
Sbjct: 1 MGRTLSGTAAVAVAVAAWANHVPGADAFSPAMIASTASAFGGPSSAVICSRRQARSRRPSPSMKVAGAQPQQQDAWMAGGVKTRELFNALSQGEIG 96
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9795.21446.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
M G R T L S G T A A V A V A V A A W A N H V P S A D A F S P A M I A S T A S A F G G P S S A V I S R R Q A R S R R P S P S M K V A G A Q P Q Q Q D A W L A G G V K T R E L F N A L S Q G E I G 10 20 30 40 50 60 70 80 90 Expect = 7.27e-46 / Id = 96.88 Sequence D7FGT3_ECTSI
Match Name E-value Identity Description
D7FGT3_ECTSI 7.270e-46 96.88 ABC1 domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M G R T L S G T A A V A V A V A A W A N H V P S A D A F S P A M I A S T A S A F G G P S S A V I S R R Q A R S R R P S P S M K V A G A Q P Q Q Q D A W L A G G V K T R E L F N A L S Q G E I G 10 20 30 40 50 60 70 80 90 Score = Score = Score = Score = Score = Score = Score = Sequence TRANSMEMBRANE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE NON_CYTOPLASMIC_DOMAIN SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION CYTOPLASMIC_DOMAIN
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PHOBIUS TRANSMEMBRANE Transmembrane region coord: 29..48 None No IPR available PHOBIUS SIGNAL_PEPTIDE_C_REGION Signal peptide C-region coord: 16..19 None No IPR available PHOBIUS SIGNAL_PEPTIDE Signal Peptide coord: 1..19 None No IPR available PHOBIUS NON_CYTOPLASMIC_DOMAIN Non cytoplasmic domain coord: 20..28 None No IPR available PHOBIUS SIGNAL_PEPTIDE_H_REGION Signal peptide H-region coord: 4..15 None No IPR available PHOBIUS SIGNAL_PEPTIDE_N_REGION Signal peptide N-region coord: 1..3 None No IPR available PHOBIUS CYTOPLASMIC_DOMAIN Cytoplasmic domain coord: 49..95
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_Ecto-sp13_S_contig9795.21446.1 ID=prot_Ecto-sp13_S_contig9795.21446.1|Name=mRNA_Ecto-sp13_S_contig9795.21446.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=95bp back to top