prot_Ecto-sp13_S_contig9759.21407.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9759.21407.1
Unique Nameprot_Ecto-sp13_S_contig9759.21407.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length77
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9759.21407.1 vs. uniprot
Match: D8LLA2_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA2_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 5.060e-22
Identity = 49/58 (84.48%), Postives = 50/58 (86.21%), Query Frame = 0 
Query:    1 MIMDFGRANRAKLQSANDDTRQEAQRIMLDIYSGHVAQECRKEDLEKNLLFPAMLPQR 58
            M MDF R NRAKLQ+ANDDTRQEAQRIM DIYSGHVAQECR EDLEK LL P MLPQR
Sbjct: 1142 MAMDFRRTNRAKLQAANDDTRQEAQRIMFDIYSGHVAQECRMEDLEKTLLSPVMLPQR 1199
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BLAST of mRNA_Ecto-sp13_S_contig9759.21407.1 vs. uniprot
Match: A0A6H5L013_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L013_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 5.480e-7
Identity = 31/52 (59.62%), Postives = 35/52 (67.31%), Query Frame = 0 
Query:    1 MIMDFGRANRAKLQSANDDTRQEAQRIMLDIYSGHVAQECRKEDLEKNLLFP 52
            MIMDF R NRAKLQ+A DDTRQEAQRIMLDI    V +    +D  + L  P
Sbjct: 1022 MIMDFRRTNRAKLQAAKDDTRQEAQRIMLDICVLDVLKAALNKDPSQRLSLP 1073
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9759.21407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLA2_ECTSI5.060e-2284.48N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5L013_9PHAE5.480e-759.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9759contigEcto-sp13_S_contig9759:1658..2665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9759.21407.1mRNA_Ecto-sp13_S_contig9759.21407.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9759 1636..2665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9759.21407.1 ID=prot_Ecto-sp13_S_contig9759.21407.1|Name=mRNA_Ecto-sp13_S_contig9759.21407.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bp
MIMDFGRANRAKLQSANDDTRQEAQRIMLDIYSGHVAQECRKEDLEKNLL
FPAMLPQREDAVPEPGVELSEGCFELK
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