prot_Ecto-sp13_S_contig9757.21406.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9757.21406.1
Unique Nameprot_Ecto-sp13_S_contig9757.21406.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.470e-29
Identity = 55/57 (96.49%), Postives = 56/57 (98.25%), Query Frame = 0
Query:    1 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRRKDPTFLSQFDMVVTTYGVV 57
            KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGR KDP+FLSQFDMVVTTYGVV
Sbjct:  727 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRSKDPSFLSQFDMVVTTYGVV 783          
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Match: D7G0T2_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T2_ECTSI)

HSP 1 Score: 113 bits (283), Expect = 6.150e-28
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRRKDPTFLSQFDMVVTTYGVV 57
            KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGG RRKDP FL++FD+VVTTYGVV
Sbjct:  697 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGNRRKDPAFLAKFDIVVTTYGVV 753          
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 6.160e-28
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRRKDPTFLSQFDMVVTTYGVV 57
            KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGG RRKDP FL++FD+VVTTYGVV
Sbjct:  758 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGNRRKDPAFLAKFDIVVTTYGVV 814          
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Match: D7G0T8_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T8_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.770e-23
Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 0
Query:    2 GTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGG-GRRKDPTFLSQFDMVVTTYGVV 57
            GTLVVCKVSLVGQWVEEAKRLCG ALSIY YHGG  R+KDP FL++FDMVVTTYG+V
Sbjct:  692 GTLVVCKVSLVGQWVEEAKRLCGSALSIYAYHGGYHRKKDPAFLAKFDMVVTTYGIV 748          
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Match: A0A835YWG4_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG4_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.390e-21
Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRRKDPTFLSQFDMVVTTYGV 56
            KGTLVVC VSLVGQWVEEA+RLC   LSIYPYHGG R KDP  L+Q+D+VVTTYG+
Sbjct:  950 KGTLVVCAVSLVGQWVEEARRLCDNKLSIYPYHGGSRTKDPKKLAQYDIVVTTYGI 1005          
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Match: A0A8J9RP02_9CHLO (Probable helicase-like transcription factor at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RP02_9CHLO)

HSP 1 Score: 72.4 bits (176), Expect = 1.850e-13
Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRRKDP-TFLSQFDMVVTTY 54
            + TLVVC VSLVGQW+EEAK    G+L +Y YHG GR KDP T  + +D+VVTTY
Sbjct:  979 RATLVVCAVSLVGQWMEEAKSKLNGSLRMYQYHGQGRNKDPVTLATSYDLVVTTY 1033          
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Match: A0A1Y1I9A0_KLENI (DEAD-box protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9A0_KLENI)

HSP 1 Score: 70.9 bits (172), Expect = 6.440e-13
Identity = 32/57 (56.14%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    1 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRRKDPTFLSQFDMVVTTYGVV 57
            K TLVVC VSLVGQW+ EAK      +++Y YHG GR  DP FL++ D+VVTTY  +
Sbjct:  585 KATLVVCAVSLVGQWISEAKGKLSAPINMYKYHGQGRSSDPFFLARQDIVVTTYATL 641          
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Match: A0A7I4DZM6_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DZM6_PHYPA)

HSP 1 Score: 68.9 bits (167), Expect = 3.070e-12
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    1 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRRKDPTFLSQFDMVVTTYGVV 57
            KGTLVVC VS+VGQW  E K      L+IY YHG  R +DP  L++FD+V+TTY  +
Sbjct:  519 KGTLVVCPVSIVGQWANEVKSKLAANLNIYMYHGSKRIRDPKRLAKFDIVITTYATL 575          
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Match: A0A2R6XUN8_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUN8_MARPO)

HSP 1 Score: 68.9 bits (167), Expect = 3.070e-12
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    1 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRRKDPTFLSQFDMVVTTYGVV 57
            KGTLVVC VS+VGQW  E K      LSIY YHG  R +DP  L+++D+V+TTY  +
Sbjct:  540 KGTLVVCPVSIVGQWANEVKSKLAANLSIYMYHGSKRIRDPKKLAKYDIVITTYATL 596          
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Match: A0A176WAI9_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WAI9_MARPO)

HSP 1 Score: 68.9 bits (167), Expect = 3.080e-12
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    1 KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRRKDPTFLSQFDMVVTTYGVV 57
            KGTLVVC VS+VGQW  E K      LSIY YHG  R +DP  L+++D+V+TTY  +
Sbjct:  540 KGTLVVCPVSIVGQWANEVKSKLAANLSIYMYHGSKRIRDPKKLAKYDIVITTYATL 596          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9757.21406.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0S9_ECTSI1.470e-2996.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0T2_ECTSI6.150e-2891.23Helicase ATP-binding domain-containing protein n=1... [more]
A0A6H5KW09_9PHAE6.160e-2891.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0T8_ECTSI1.770e-2384.21Helicase ATP-binding domain-containing protein n=1... [more]
A0A835YWG4_9STRA1.390e-2176.79SNF2 family N-terminal domain-containing protein n... [more]
A0A8J9RP02_9CHLO1.850e-1361.82Probable helicase-like transcription factor at C-t... [more]
A0A1Y1I9A0_KLENI6.440e-1356.14DEAD-box protein n=1 Tax=Klebsormidium nitens TaxI... [more]
A0A7I4DZM6_PHYPA3.070e-1254.39Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A2R6XUN8_MARPO3.070e-1254.39Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
A0A176WAI9_MARPO3.080e-1254.39Uncharacterized protein n=2 Tax=Marchantia polymor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 1..57
e-value: 1.1E-8
score: 36.5
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 2..56
e-value: 5.6E-7
score: 28.6
NoneNo IPR availablePANTHERPTHR45626:SF24HELICASE-LIKE TRANSCRIPTION FACTOR CHR27-RELATEDcoord: 2..57
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 2..57
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9757contigEcto-sp13_S_contig9757:4323..5496 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9757.21406.1mRNA_Ecto-sp13_S_contig9757.21406.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9757 4323..5496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9757.21406.1 ID=prot_Ecto-sp13_S_contig9757.21406.1|Name=mRNA_Ecto-sp13_S_contig9757.21406.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
KGTLVVCKVSLVGQWVEEAKRLCGGALSIYPYHGGGRRKDPTFLSQFDMV
VTTYGVV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038718SNF2-like_sf
IPR000330SNF2_N
IPR027417P-loop_NTPase