prot_Ecto-sp13_S_contig9757.21405.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9757.21405.1
Unique Nameprot_Ecto-sp13_S_contig9757.21405.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length157
Homology
BLAST of mRNA_Ecto-sp13_S_contig9757.21405.1 vs. uniprot
Match: D7G0S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S9_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 1.030e-92
Identity = 145/157 (92.36%), Postives = 150/157 (95.54%), Query Frame = 0
Query:    1 GYGGRASLDVSLSGLVDSVREEERNDNIEEGRIIHPAKMLLELENLQHRSLAKQPDCLTVELYEHQKQDAQWMMDQEMLEGGSMQHLWAELPAHHLANGRRAHEFRRCWFSPILNQFTTTNPFTSTMKGGILCDEMGLGKTAATLCLHLIHPARTPA 157
            GYGGRASLDVSLSGL+DSVR EERN+N+EE RIIHPAKMLLELENLQHRSLAKQPDCLTV+LYEHQKQDAQWMMDQEMLEGGSMQHLWAELP HHLANGR +HEFRRCWFSPILNQFTT NPF STMKGGILCDEMGLGKTAATLCLHLIHP RTPA
Sbjct:  530 GYGGRASLDVSLSGLIDSVRAEERNNNVEERRIIHPAKMLLELENLQHRSLAKQPDCLTVDLYEHQKQDAQWMMDQEMLEGGSMQHLWAELPPHHLANGRCSHEFRRCWFSPILNQFTTDNPFASTMKGGILCDEMGLGKTAATLCLHLIHPPRTPA 686          
BLAST of mRNA_Ecto-sp13_S_contig9757.21405.1 vs. uniprot
Match: A0A6H5KW09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW09_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 5.780e-81
Identity = 132/157 (84.08%), Postives = 143/157 (91.08%), Query Frame = 0
Query:    3 GGRASLDVSLSGLVDSVREEERNDNIEEGRIIHPAKMLLELENLQHRSLAKQPDCLTVELYEHQKQDAQWMMDQEMLEGGSMQHLWAELPAHHLA--NGRRAHEFRRCWFSPILNQFTTTNPFTSTMKGGILCDEMGLGKTAATLCLHLIHPARTPA 157
            GG AS+DVSLSGL++SVR+EE N  IE G+I HPAKMLLELENLQHRSL KQPDCL+VELYEHQKQDAQWMMDQEMLEGGSMQHLWAELPAHHLA  +G+R +EFRRCWFSPILNQFT  +PF STMKGGILCDEMGLGKTAATLCLHLIHP +TPA
Sbjct:  562 GGYASIDVSLSGLINSVRDEETNSYIEGGQIHHPAKMLLELENLQHRSLVKQPDCLSVELYEHQKQDAQWMMDQEMLEGGSMQHLWAELPAHHLAPADGQRINEFRRCWFSPILNQFTAIDPFASTMKGGILCDEMGLGKTAATLCLHLIHPPKTPA 718          
BLAST of mRNA_Ecto-sp13_S_contig9757.21405.1 vs. uniprot
Match: D7G0T8_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T8_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 1.430e-59
Identity = 101/159 (63.52%), Postives = 124/159 (77.99%), Query Frame = 0
Query:    1 GYGGRASLDVSLSGLVDSVREEERNDNIEEGRIIHPAKMLLELENLQHRSLAKQPDCLTVELYEHQKQDAQWMMDQEMLEGGSMQHLWAELPAHHL--ANGRRAHEFRRCWFSPILNQFTTTNPFTSTMKGGILCDEMGLGKTAATLCLHLIHPARTPA 157
            GYGG++S DV+L GL++SVR EER+ +I    + +P ++L  LEN+QH +L KQPDCLTV+L+EHQ Q  QWM DQE+LEGG+MQHLW ELP H    AN  R+ EFRRCW+SP LNQFT  NPF +  KGG+LCDEMGLGKTAATL LHLIHP +TP+
Sbjct:  493 GYGGQSSTDVTLEGLINSVRAEERSPSIVSKLVHNPTELLKVLENVQHGALIKQPDCLTVQLFEHQLQATQWMYDQEVLEGGAMQHLWVELPPHPQMPANHDRSCEFRRCWYSPALNQFTVKNPFKAGTKGGLLCDEMGLGKTAATLALHLIHPPQTPS 651          
BLAST of mRNA_Ecto-sp13_S_contig9757.21405.1 vs. uniprot
Match: D7G0T2_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0T2_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 1.740e-33
Identity = 76/156 (48.72%), Postives = 85/156 (54.49%), Query Frame = 0
Query:    2 YGGRASLDVSLSGLVDSVREEERNDNIEEGRIIHPAKMLLELENLQHRSLAKQPDCLTVELYEHQKQDAQWMMDQEMLEGGSMQHLWAELPAHHLANGRRAHEFRRCWFSPILNQFTTTNPFTSTMKGGILCDEMGLGKTAATLCLHLIHPARTPA 157
            YGG AS+DVSLSGL++SVR+EE N  IE G+I HPAK                                                           +G+R +EFRR WFSPILNQFT  NPF STMKGGILCDEMGLGKTAATLCLHLIHP +TPA
Sbjct:  561 YGGYASVDVSLSGLINSVRDEETNSYIEGGQIHHPAK-----------------------------------------------------------SGQRLNEFRRSWFSPILNQFTAVNPFASTMKGGILCDEMGLGKTAATLCLHLIHPPKTPA 657          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9757.21405.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0S9_ECTSI1.030e-9292.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW09_9PHAE5.780e-8184.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0T8_ECTSI1.430e-5963.52Helicase ATP-binding domain-containing protein n=1... [more]
D7G0T2_ECTSI1.740e-3348.72Helicase ATP-binding domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 65..149
e-value: 2.0E-8
score: 33.3
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 117..156
e-value: 1.6E-5
score: 25.8
NoneNo IPR availablePANTHERPTHR45626FAMILY NOT NAMEDcoord: 34..151
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 30..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9757contigEcto-sp13_S_contig9757:1492..3922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9757.21405.1mRNA_Ecto-sp13_S_contig9757.21405.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9757 1492..3922 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9757.21405.1 ID=prot_Ecto-sp13_S_contig9757.21405.1|Name=mRNA_Ecto-sp13_S_contig9757.21405.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=157bp
GYGGRASLDVSLSGLVDSVREEERNDNIEEGRIIHPAKMLLELENLQHRS
LAKQPDCLTVELYEHQKQDAQWMMDQEMLEGGSMQHLWAELPAHHLANGR
RAHEFRRCWFSPILNQFTTTNPFTSTMKGGILCDEMGLGKTAATLCLHLI
HPARTPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase