prot_Ecto-sp13_S_contig97433.21387.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig97433.21387.1
Unique Nameprot_Ecto-sp13_S_contig97433.21387.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length167
Homology
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BLAST of mRNA_Ecto-sp13_S_contig97433.21387.1 vs. uniprot
Match: A0A6H5J5V3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V3_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 1.460e-94
Identity = 142/167 (85.03%), Postives = 147/167 (88.02%), Query Frame = 0 
Query:    1 MEWGTFGGGGSNRASLVQPRRRAERQLLADEDVATIADHMDQADSEFVAKMCIASAFLSCLLAWLAWSSWWSRNGRKQAGGRRGHRVQPRPPLRTTSSLDSLSDSANSPIQGVGAADGCHRGTLATDRSQPRQHQQQDEGRNEAQGQDGMNEFYNPLWGQRGASRCC 167
            MEWGTFGGG SNRASLV+PR RAERQLL DEDVA +ADHMDQADSEFVAKMCIASAFLSCLLAWLAWS WW RNGRK AGGRRG RVQPRPPL TT S DSLSDSANSP  GVG ADGCHRG LATDRSQPRQ QQ+DEG+N  Q QDG+NEFYNPLW QRGASRCC
Sbjct:    1 MEWGTFGGGSSNRASLVRPRSRAERQLLEDEDVAAVADHMDQADSEFVAKMCIASAFLSCLLAWLAWSFWWDRNGRKLAGGRRGPRVQPRPPLPTTRSFDSLSDSANSPSNGVGVADGCHRGALATDRSQPRQQQQRDEGQNRGQRQDGINEFYNPLWVQRGASRCC 167
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig97433.21387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J5V3_9PHAE1.460e-9485.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..67
NoneNo IPR availableTMHMMTMhelixcoord: 47..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig97433contigEcto-sp13_S_contig97433:11..511 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig97433.21387.1mRNA_Ecto-sp13_S_contig97433.21387.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig97433 11..511 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig97433.21387.1 ID=prot_Ecto-sp13_S_contig97433.21387.1|Name=mRNA_Ecto-sp13_S_contig97433.21387.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp
MEWGTFGGGGSNRASLVQPRRRAERQLLADEDVATIADHMDQADSEFVAK
MCIASAFLSCLLAWLAWSSWWSRNGRKQAGGRRGHRVQPRPPLRTTSSLD
SLSDSANSPIQGVGAADGCHRGTLATDRSQPRQHQQQDEGRNEAQGQDGM
NEFYNPLWGQRGASRCC
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