prot_Ecto-sp13_S_contig9734.21371.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9734.21371.1
Unique Nameprot_Ecto-sp13_S_contig9734.21371.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length112
Homology
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Match: A0A6H5JIB4_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIB4_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 1.090e-58
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0
Query:   10 DTADGNVAYAACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYIGQVLPIIKLSLVDSSAGVRRNAAFCAGTLAQ 112
            DTADGNVAYAACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKY+GQVLPIIKLSLVDSSAGVRRNAAFCAGTLAQ
Sbjct:  833 DTADGNVAYAACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYVGQVLPIIKLSLVDSSAGVRRNAAFCAGTLAQ 935          
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Match: A0A7S3M799_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M799_9STRA)

HSP 1 Score: 111 bits (278), Expect = 6.700e-27
Identity = 58/104 (55.77%), Postives = 69/104 (66.35%), Query Frame = 0
Query:    9 EDTADGNVAYAACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYIGQVLPIIKLSLVDSSAGVRRNAAFCAGTLAQ 112
            ED  D  V  A  DL+G  AKV+GP+F   FD F   +LK+ K SR  +DRSMA+GC+AEV   IGPA  KY   +LP+I+L L DS  GVRRNAAFC GTL Q
Sbjct:  140 EDDHDNLVMDAVTDLIGELAKVLGPNFVAYFDEFQKLLLKFAKPSRAHTDRSMAIGCYAEVIAEIGPASLKYAELLLPMIQLGLADSMEGVRRNAAFCVGTLVQ 243          
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Match: B7GC72_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GC72_PHATC)

HSP 1 Score: 90.5 bits (223), Expect = 7.340e-19
Identity = 50/101 (49.50%), Postives = 62/101 (61.39%), Query Frame = 0
Query:    9 EDTADGNVAYAACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYIGQV-LPIIKLSLVDSSAGVRRNAAFCAG 108
            +D  DG +  A CDLVG F +V+G  FA+    FLP I +Y K SRPASDRSMAVGC +E+ + +  +   Y   V LP I   L D    V+RNAAFCAG
Sbjct:  529 DDDHDG-IMQAVCDLVGGFGRVLGSQFAQYLGQFLPAICEYGKSSRPASDRSMAVGCLSEIAQELESSVLDYWPTVFLPAILSGLADEDDNVKRNAAFCAG 628          
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Match: A0A7S2YBI1_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YBI1_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.510e-18
Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 0
Query:   19 AACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYIGQV-LPIIKLSLVDSSAGVRRNAAFCAG 108
            AACDLVG + +V+G  FA+    FLP I +Y K SRPASDRSMAVGC +EV + +  A +++   V LP I   L D    V+RN+AFCAG
Sbjct:  437 AACDLVGGYCRVMGQHFAQYLPQFLPAICEYAKPSRPASDRSMAVGCLSEVAQELEGAISEHWQSVFLPAILNGLADEDVNVKRNSAFCAG 527          
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Match: A0A7S4MQ84_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MQ84_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 4.250e-17
Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 0
Query:   19 AACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYIGQV-LPIIKLSLVDSSAGVRRNAAFCAG 108
            + CDLVG+FA+V+GP F +    FLP +  Y K SRP SDRSMA+GC  E+ + +G     +   V LP I   L D    V+RN+AFCAG
Sbjct:  772 SVCDLVGSFARVMGPHFVQYLPQFLPPVCAYAKSSRPPSDRSMAMGCLGELGQELGDGIRDHWESVFLPAILAGLADPDDNVKRNSAFCAG 862          
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Match: A0A448YYP5_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYP5_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 8.420e-15
Identity = 43/94 (45.74%), Postives = 56/94 (59.57%), Query Frame = 0
Query:   16 VAYAACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYIGQV-LPIIKLSLVDSSAGVRRNAAFCAG 108
            V  AACDLVG F +V+G  F +    FLP + +Y K SRPA DRSMA+G  +EV + +     ++   V LP     L D +  V+RNAAFCAG
Sbjct:  843 VTQAACDLVGGFCRVMGAQFGQYLPQFLPAVCEYAKSSRPARDRSMAIGWLSEVAQELEGTIFEHWKTVFLPATLAGLGDPAEEVKRNAAFCAG 936          
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Match: A0A5C3LAV8_9AGAR (Importin beta-4 subunit n=1 Tax=Coprinopsis marcescibilis TaxID=230819 RepID=A0A5C3LAV8_9AGAR)

HSP 1 Score: 75.9 bits (185), Expect = 1.010e-13
Identity = 40/100 (40.00%), Postives = 56/100 (56.00%), Query Frame = 0
Query:   13 DGNVAYAACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYIGQVLPIIKLSLVDSSAGVRRNAAFCAGTLAQ 112
            D  +  +A DLV + A V+GP+F  +F+ F P I KY + +R  SDRS A+GCFAE+   I      + G +L +   +L D  A V  NAAF  G L +
Sbjct:  833 DSVLISSAGDLVASLANVLGPTFVPAFEKFYPLIAKYYRKNRSLSDRSSAIGCFAEIISGIKGGVTNHTGPLLELFLKALADEEAEVLSNAAFAIGLLVE 932          
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Match: D8R1R8_SELML (Importin N-terminal domain-containing protein n=6 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R1R8_SELML)

HSP 1 Score: 75.5 bits (184), Expect = 1.380e-13
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 0
Query:    2 DDEEXXXEDTADGNVAYAACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYIGQVLPIIKLSLVDSSAGVRRNAAFCAGTL 110
            DDE+    DT D  +  A  D++ A A  +GPSF   F      ++K++K SR A+DR+M +GC AE+  +IG     YI +V+P+    L  + A  RRNAA+C G L
Sbjct:  783 DDEDDGQLDT-DQALMDAVADVLPAMATCMGPSFEPIFSQHFEALMKFSKESRAANDRTMVIGCVAEIARAIGSQIIPYIPRVMPVALQELRSAEAANRRNAAYCVGQL 890          
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Match: A0A177VS71_9BASI (Importin N-terminal domain-containing protein n=4 Tax=Tilletia TaxID=13289 RepID=A0A177VS71_9BASI)

HSP 1 Score: 72.0 bits (175), Expect = 2.270e-12
Identity = 37/92 (40.22%), Postives = 55/92 (59.78%), Query Frame = 0
Query:   19 AACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYIGQVLPIIKLSLVDSSAGVRRNAAFCAGTL 110
            ++ DL+G  A  +G  FA  F  FLP ++KY    R  S+RS A+G FAE+   +G A   +  Q+L I+  ++ D +A VR+NAAF +G L
Sbjct:  843 SSVDLLGGLAGALGADFAPLFSKFLPLLVKYYAPGRSDSERSTAIGGFAEIILGLGGAVTPFTEQILSILSRAITDDAAQVRQNAAFASGLL 934          
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Match: A8N951_COPC7 (Importin beta-4 subunit n=1 Tax=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) TaxID=240176 RepID=A8N951_COPC7)

HSP 1 Score: 68.9 bits (167), Expect = 2.730e-11
Identity = 40/111 (36.04%), Postives = 57/111 (51.35%), Query Frame = 0
Query:    2 DDEEXXXEDTADGNVAYAACDLVGAFAKVIGPSFAESFDVFLPNILKYTKGSRPASDRSMAVGCFAEVFESIGPACAKYIGQVLPIIKLSLVDSSAGVRRNAAFCAGTLAQ 112
            DDE    +   D  +  +A DLV A A  +G  F  +F+ F P I KY + +R  SDRS A+GCFAE+   I     ++   +L + + +L D    V  NAAF  G L +
Sbjct:  798 DDEAPEYQAEYDSVLISSAGDLVAALANALGVEFVPAFNTFYPLIAKYYRKNRSLSDRSSAIGCFAEIISGIKNGVTEHTAALLELFQKALNDEEPEVLSNAAFAIGLLVE 908          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9734.21371.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JIB4_9PHAE1.090e-5899.03Importin N-terminal domain-containing protein n=2 ... [more]
A0A7S3M799_9STRA6.700e-2755.77Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
B7GC72_PHATC7.340e-1949.50Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2YBI1_9STRA2.510e-1851.65Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S4MQ84_9STRA4.250e-1747.25Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A448YYP5_9STRA8.420e-1545.74Importin N-terminal domain-containing protein n=1 ... [more]
A0A5C3LAV8_9AGAR1.010e-1340.00Importin beta-4 subunit n=1 Tax=Coprinopsis marces... [more]
D8R1R8_SELML1.380e-1339.45Importin N-terminal domain-containing protein n=6 ... [more]
A0A177VS71_9BASI2.270e-1240.22Importin N-terminal domain-containing protein n=4 ... [more]
A8N951_COPC72.730e-1136.04Importin beta-4 subunit n=1 Tax=Coprinopsis cinere... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..112
e-value: 3.2E-21
score: 77.1
NoneNo IPR availablePANTHERPTHR10527:SF6IMPORTIN-4coord: 5..112
IPR040122Importin beta familyPANTHERPTHR10527IMPORTIN BETAcoord: 5..112
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9734contigEcto-sp13_S_contig9734:4501..5921 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9734.21371.1mRNA_Ecto-sp13_S_contig9734.21371.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9734 4501..5921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9734.21371.1 ID=prot_Ecto-sp13_S_contig9734.21371.1|Name=mRNA_Ecto-sp13_S_contig9734.21371.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp
DDDEEDDDEDTADGNVAYAACDLVGAFAKVIGPSFAESFDVFLPNILKYT
KGSRPASDRSMAVGCFAEVFESIGPACAKYIGQVLPIIKLSLVDSSAGVR
RNAAFCAGTLAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR040122Importin_beta
IPR016024ARM-type_fold