prot_Ecto-sp13_S_contig973.21364.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig973.21364.1
Unique Name	prot_Ecto-sp13_S_contig973.21364.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	116

Homology

[Close]

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Match: A0A6H5L9K7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9K7_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 4.740e-50
Identity = 84/90 (93.33%), Postives = 84/90 (93.33%), Query Frame = 0

Query:   27 VWSTPEVVGVAPPPRTGHSAVLLPDGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLRVGHTAVLARC 116
            VWSTPEVVGVAPPPRTGHSAVLLPDGHTI IHGGWDPEDEGG     VKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLRVGHTAVLARC
Sbjct:  652 VWSTPEVVGVAPPPRTGHSAVLLPDGHTIFIHGGWDPEDEGG-----VKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLRVGHTAVLARC 736

[Close]

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Match: D8LL74_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL74_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 1.100e-49
Identity = 83/90 (92.22%), Postives = 83/90 (92.22%), Query Frame = 0

Query:   27 VWSTPEVVGVAPPPRTGHSAVLLPDGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLRVGHTAVLARC 116
            VWSTPEVVGVAPPPRTGHSAVLLPDGHTI IHGGWDPEDEGG     VKNFGDAYLLDTNLWEWTRGPEFLLGA EAGLRVGHTAVLARC
Sbjct:  503 VWSTPEVVGVAPPPRTGHSAVLLPDGHTIFIHGGWDPEDEGG-----VKNFGDAYLLDTNLWEWTRGPEFLLGAAEAGLRVGHTAVLARC 587

[Close]

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Match: K0TAZ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAZ5_THAOC)

HSP 1 Score: 115 bits (288), Expect = 9.090e-28
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 0

Query:    1 MVVFGGNNQNESFDKVHVLDTSKSRWVWSTPEVVGVAPPPRTGHSAVLLPDGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEWTRGPEF-------LLGADEAGLRVGHTAVLARC 116
            +V+FGGNN  E F+ +HVL+ +   W WS P   G  P PRTGH+A LL DG T++I+GGWDP DE  +  +    F D++LLDT  W W +GP+        +   +    RVGH++VLA C
Sbjct:  389 IVIFGGNNAEECFNTLHVLEMASGGWTWSHPSTTGPKPLPRTGHTATLLNDGTTLMIYGGWDPNDEAESDLI----FADSFLLDTCTWTWRKGPKAKFEKANSVTATNGGAARVGHSSVLAPC 507

[Close]

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Match: A0A7S2WBH9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WBH9_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 5.600e-24
Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 0

Query:   13 FDKVHVLDT---SKSRWVWSTPEVVGVAPPPRTGHSAVLLPDGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEWTRGPE--FLLGADEAG---LRVGHTAVLA 114
            F+ VH+LD    S  +W W  P + G  P PRTGH+AVLL DG TI+I+GGWDP DE      ++  F D++LLDT++W W+ GP   F+ G +       RVGH+ +LA
Sbjct:    1 FNSVHLLDATGDSTGKWNWFQPNISGKPPSPRTGHTAVLLEDGKTILIYGGWDPTDEEEEDETQI--FDDSFLLDTDMWSWSPGPNSRFVPGTESTNGGSKRVGHSGILA 108

[Close]

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Match: A0A448Z4U0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z4U0_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.470e-23
Identity = 57/137 (41.61%), Postives = 71/137 (51.82%), Query Frame = 0

Query:    1 MVVFGGNNQNESFDKVHVLDTSKSR---------------WVWSTPEVVGVAPPPRTGHSAVLLPDGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEWTRGPEFLLGA---------DEAGLRVGHTAVL 113
            +VVFGGNN+   F+ VHVL+                    W WS P + G AP PRTGH+A LL DG TI+++GGWDP +E   +      F  +YLLDT+ W W RGP+ L G          D    R GHTA L
Sbjct:  493 LVVFGGNNKTSCFNTVHVLEAINDNDGNSMNPDSEGGSIGWKWSNPTIRGNAPFPRTGHTATLLEDGKTIMVYGGWDPNEED-ELTGEDNIFKGSYLLDTHDWTWKRGPDPLSGGSGSANHIVEDCGAKRCGHTAAL 628

[Close]

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Match: A0A485L6C0_9STRA (Aste57867_16473 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6C0_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 5.240e-21
Identity = 54/115 (46.96%), Postives = 70/115 (60.87%), Query Frame = 0

Query:    1 MVVFGGNNQNESFDKVHVLD--TSKSRWVWSTPEVVGVAPPPRTGHSAVLLPDGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLR-VGHTAV 112
            MV+FGGN+  +S+D VHVL+  + K  W W  P VVG  P PRTG SAV L D  TIVI+GGWDP++       +V+ +GD Y LDT  WEW       +  ++A L+ VGH  V
Sbjct:  404 MVIFGGNDAKKSYDSVHVLERKSDKDAWSWFNPCVVGNGPSPRTGASAVPLDD-RTIVIYGGWDPQNPN-----KVQLYGDVYTLDTESWEWGT---MAIETNKASLQCVGHVGV 509

[Close]

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Match: A0A4D9CV08_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV08_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 7.920e-21
Identity = 57/126 (45.24%), Postives = 70/126 (55.56%), Query Frame = 0

Query:    1 MVVFGGNNQNESFDKVHVLDTS------KSRWVWSTPEVVGV-APPPRTGHSAVLLPDGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEW-TRGPEFLLGADEA---GLRVGHTAVLAR 115
            +V FGGN+ +  FDKVHVL         +  W W  P VVG   P  RTGH+A LL DG +I + GGWDP+DE          F DA++LDT  WEW   G E   G  +    G+ VGHTAV+AR
Sbjct:  493 IVYFGGNDGSTCFDKVHVLKVGGRGGGRERGWEWFHPMVVGCDRPAKRTGHAACLLQDGKSIWVQGGWDPQDE---TSEETTLFEDAFILDTETWEWRAAGAEVGAGEQQEEGPGVVVGHTAVVAR 615

[Close]

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Match: A0A7S0BX06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BX06_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 8.470e-21
Identity = 49/120 (40.83%), Postives = 71/120 (59.17%), Query Frame = 0

Query:    1 MVVFGGNNQNESF--DKVHVLDTSKSRWVWSTPEVVGV--APPPRTGHSAVLLPDGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEWTRGPEFLLGA---DEAGLRVGHTAVL 113
            +V+ GGN++ +SF    V VLDTS++ W W  P   G    P  RTG +A+L+ DG +I+++GGWDP  E     +    FGDA+LLDT  W+W+R  +  +     DE   RVGH+ +L
Sbjct:    2 VVILGGNDEAKSFGGQSVSVLDTSRAVWSWFHPTCRGRQGVPSGRTGQAAILMADGTSILVYGGWDPSSEEEEEDV----FGDAWLLDTETWDWSRVNDLRMEKQEDDEGAFRVGHSLML 117

[Close]

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Match: A0A1E7F5M3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5M3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 5.160e-20
Identity = 48/115 (41.74%), Postives = 61/115 (53.04%), Query Frame = 0

Query:    1 MVVFGGNNQNESFDKVHVLDTSKSR---------------------WVWSTPEVVGVAPPPRTGHSAVLLPDGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEWTRGP 94
            MVVFGGNN++  FD VHVL+ + +                      W WS P + G AP  RTGHSA LL DG TI+++GGWDP +E   +      F  +Y+LDT  W W  GP
Sbjct:  524 MVVFGGNNKSSCFDTVHVLEATSNGSESTTNGSINXXXNGGIASTGWKWSNPTIRGKAPLARTGHSATLLEDGKTIMVYGGWDPNEED-ELTGEENIFKGSYMLDTQEWTWKEGP 637

[Close]

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Match: W2M544_PHYPR (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2M544_PHYPR)

HSP 1 Score: 92.4 bits (228), Expect = 1.700e-19
Identity = 53/115 (46.09%), Postives = 67/115 (58.26%), Query Frame = 0

Query:    6 GNNQNESFDKVHVLDTSKSR-----WVWSTPEVVGVAPPPRTGHSAVLLPDGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEWTRGPEFLLGADEAGLR--VGHTAVL 113
            GN+ ++SF+ VHVL   + +     W W  P VVGV P  RTGHSA LL DG  I++ GGWDP+ +  +    V  F DA+LLDTN WEW        G+ +  LR  VGH AVL
Sbjct:  411 GNDSSKSFNAVHVLQKVEKKGSGVVWSWFHPCVVGVPPQERTGHSATLLSDGK-ILVFGGWDPQRDDASAPTSV--FSDAFLLDTNTWEWQPAAYTDEGSADTALRGRVGHGAVL 522

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig973.21364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L9K7_9PHAE	4.740e-50	93.33	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LL74_ECTSI	1.100e-49	92.22	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
K0TAZ5_THAOC	9.090e-28	43.90	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A7S2WBH9_9STRA	5.600e-24	45.45	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A448Z4U0_9STRA	7.470e-23	41.61	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
A0A485L6C0_9STRA	5.240e-21	46.96	Aste57867_16473 protein n=1 Tax=Aphanomyces stella...	[more]
A0A4D9CV08_9STRA	7.920e-21	45.24	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A7S0BX06_9STRA	8.470e-21	40.83	Hypothetical protein (Fragment) n=1 Tax=Proboscia ...	[more]
A0A1E7F5M3_9STRA	5.160e-20	41.74	Uncharacterized protein n=1 Tax=Fragilariopsis cyl...	[more]
W2M544_PHYPR	1.700e-19	46.09	Uncharacterized protein n=8 Tax=Phytophthora TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015915	Kelch-type beta propeller	GENE3D	2.120.10.80		coord: 1..115 e-value: 1.8E-10 score: 42.4
None	No IPR available	PFAM	PF13415	Kelch_3	coord: 1..47 e-value: 2.0E-7 score: 31.1
None	No IPR available	PANTHER	PTHR23244	KELCH REPEAT DOMAIN	coord: 2..112
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 2..113

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig973	contig	Ecto-sp13_S_contig973:9..1259 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig973.21364.1	mRNA_Ecto-sp13_S_contig973.21364.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig973 9..1259 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig973.21364.1 ID=prot_Ecto-sp13_S_contig973.21364.1|Name=mRNA_Ecto-sp13_S_contig973.21364.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=116bp
MVVFGGNNQNESFDKVHVLDTSKSRWVWSTPEVVGVAPPPRTGHSAVLLP
DGHTIVIHGGWDPEDEGGAVCLRVKNFGDAYLLDTNLWEWTRGPEFLLGA
DEAGLRVGHTAVLARC

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015915	Kelch-typ_b-propeller
IPR011043	Gal_Oxase/kelch_b-propeller