prot_Ecto-sp13_S_contig97.21334.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig97.21334.1
Unique Nameprot_Ecto-sp13_S_contig97.21334.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length218
Homology
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BLAST of mRNA_Ecto-sp13_S_contig97.21334.1 vs. uniprot
Match: D8LNE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNE6_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 8.740e-11
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 
Query:    1 MVDKRNTRRQTALHSACLGGHHEVADILMKR 31
            MVDKRNTRRQTALHSACLGGHHEVADILMKR
Sbjct:   46 MVDKRNTRRQTALHSACLGGHHEVADILMKR 76
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig97.21334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNE6_ECTSI8.740e-11100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..206
NoneNo IPR availablePFAMPF13637Ank_4coord: 44..95
e-value: 2.2E-11
score: 44.0
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 2..63
coord: 46..122
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 74..103
e-value: 3.8E-4
score: 29.8
coord: 8..37
e-value: 1.1E-4
score: 31.6
coord: 41..70
e-value: 0.16
score: 21.0
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 10..40
e-value: 4.0E-5
score: 23.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 8..40
score: 12.663
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 74..106
score: 12.235
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 41..73
score: 8.736
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..201
e-value: 1.5E-32
score: 115.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..120
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..106
score: 31.219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig97contigEcto-sp13_S_contig97:9315..13653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig97.21334.1mRNA_Ecto-sp13_S_contig97.21334.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig97 7312..13795 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig97.21334.1 ID=prot_Ecto-sp13_S_contig97.21334.1|Name=mRNA_Ecto-sp13_S_contig97.21334.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=218bp
MVDKRNTRRQTALHSACLGGHHEVADILMKRGADITAKDDQLVSILHCAA
SGGNDNIVRTLLASKVVVNARDDRSSTPLHAACMRGHISVIRLLVEAGGD
TVAVDCKKRSPGDVIGEMGYVKHDLAKAIRTVLNSASGGFREQAADLKRE
KESLKVELETITKRLHAVEGELENADQEITQLKNLVKKMEEEIRQLRSAA
SKETRRPKKNKIPCTIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom