prot_Ecto-sp13_S_contig96870.21320.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96870.21320.1
Unique Nameprot_Ecto-sp13_S_contig96870.21320.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length75
Homology
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BLAST of mRNA_Ecto-sp13_S_contig96870.21320.1 vs. uniprot
Match: D8LJE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE3_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 2.420e-32
Identity = 63/74 (85.14%), Postives = 65/74 (87.84%), Query Frame = 0 
Query:    1 KDRDTTNLEEAPARRYLRLGTHTTRTTRAAPPAVFTPRRRDIGAVETRLAHSRSQTLPPPLQGSVTTWVVPCAR 74
            KDR+T NLEEAP RRYLRLGT  TRTTRAAP AVFTPRRRD GAVET LAHSRSQT PPPL+GS TTWVVPCAR
Sbjct:   21 KDRNTPNLEEAPVRRYLRLGTQATRTTRAAPRAVFTPRRRDTGAVETLLAHSRSQTRPPPLRGSATTWVVPCAR 94
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BLAST of mRNA_Ecto-sp13_S_contig96870.21320.1 vs. uniprot
Match: A0A6H5KS92_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS92_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 6.600e-14
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0 
Query:    1 KDRDTTNLEEAPARRYLRLGTHTTRTTRAAPPAVFTPRRRDIG 43
            KDRDT NLEEAPARRYLRLGT TTRTT+A PP VFTPRRRD G
Sbjct:   21 KDRDTPNLEEAPARRYLRLGTQTTRTTKADPPVVFTPRRRDTG 63
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96870.21320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJE3_ECTSI2.420e-3285.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KS92_9PHAE6.600e-1486.05Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96870contigEcto-sp13_S_contig96870:115..339 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96870.21320.1mRNA_Ecto-sp13_S_contig96870.21320.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96870 115..524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96870.21320.1 ID=prot_Ecto-sp13_S_contig96870.21320.1|Name=mRNA_Ecto-sp13_S_contig96870.21320.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp
KDRDTTNLEEAPARRYLRLGTHTTRTTRAAPPAVFTPRRRDIGAVETRLA
HSRSQTLPPPLQGSVTTWVVPCAR*
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