prot_Ecto-sp13_S_contig96853.21319.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96853.21319.1
Unique Nameprot_Ecto-sp13_S_contig96853.21319.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length67
Homology
BLAST of mRNA_Ecto-sp13_S_contig96853.21319.1 vs. uniprot
Match: D7G0C8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0C8_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 2.430e-32
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0
Query:    1 KVVEDGDHAEVVETLQSLKDSEPQLLVAVLDALGNLSLPPRLLGGITEDALGLLDSAQPSTLPVLVR 67
            +VVEDGDHAEVVETLQSLKDSEPQLLVAVLDALGNLSLPPRLLGGITEDALGLLDSAQPSTLPVLVR
Sbjct:  132 EVVEDGDHAEVVETLQSLKDSEPQLLVAVLDALGNLSLPPRLLGGITEDALGLLDSAQPSTLPVLVR 198          
BLAST of mRNA_Ecto-sp13_S_contig96853.21319.1 vs. uniprot
Match: A0A7S2RXY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RXY2_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.240e-9
Identity = 27/67 (40.30%), Postives = 46/67 (68.66%), Query Frame = 0
Query:    1 KVVEDGDHAEVVETLQSLKDSEPQLLVAVLDALGNLSLPPRLLGGITEDALGLLDSAQPSTLPVLVR 67
            +V+ED +H+  V+  + + + E +L V ++++LGNL +PP ++G + E  LG+L+SA  S LPV VR
Sbjct:    1 EVLEDSNHSVAVDRFRQMLECERELTVPIIESLGNLRIPPNMVGALRETVLGILESAPFSDLPVAVR 67          
BLAST of mRNA_Ecto-sp13_S_contig96853.21319.1 vs. uniprot
Match: A0A0D2WL35_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WL35_CAPO3)

HSP 1 Score: 56.2 bits (134), Expect = 1.440e-7
Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    2 VVEDGDHAEVVETLQSLKDSEPQLLVAVLDALGNLSLPPRLLGGITEDALGLLDSAQPSTLPVLVR 67
            ++ D +H  +V+ L  L  SEP+L+V +LDAL NL+LPP  +  I +  L +L S   S +PV+VR
Sbjct:  465 ILNDAEHRRMVDCLSMLVTSEPKLMVTILDALSNLTLPPHQVDEIRDKILKMLASVDVSDMPVVVR 530          
BLAST of mRNA_Ecto-sp13_S_contig96853.21319.1 vs. uniprot
Match: UPI001E1D1264 (LOW QUALITY PROTEIN: Fanconi anemia group D2 protein-like n=1 Tax=Portunus trituberculatus TaxID=210409 RepID=UPI001E1D1264)

HSP 1 Score: 50.1 bits (118), Expect = 2.150e-5
Identity = 26/66 (39.39%), Postives = 37/66 (56.06%), Query Frame = 0
Query:    2 VVEDGDHAEVVETLQSLKDSEPQLLVAVLDALGNLSLPPRLLGGITEDALGLLDSAQPSTLPVLVR 67
            +V D DH  + E L  L  S P L  A+LD+LG L+LP   L  +    L  L +A+P  LPV+++
Sbjct:  309 IVTDSDHPRLAEMLCDLYGSTPDLTPAILDSLGQLTLPKDSLAEVFHSVLKTLHAAKPEQLPVIIK 374          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96853.21319.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G0C8_ECTSI2.430e-3298.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2RXY2_9STRA4.240e-940.30Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A0D2WL35_CAPO31.440e-742.42Uncharacterized protein n=2 Tax=Capsaspora owczarz... [more]
UPI001E1D12642.150e-539.39LOW QUALITY PROTEIN: Fanconi anemia group D2 prote... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029448Fanconi anaemia protein FANCD2PFAMPF14631FancD2coord: 2..67
e-value: 4.7E-7
score: 27.7
IPR029448Fanconi anaemia protein FANCD2PANTHERPTHR32086FAMILY NOT NAMEDcoord: 2..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96853contigEcto-sp13_S_contig96853:307..507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96853.21319.1mRNA_Ecto-sp13_S_contig96853.21319.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96853 307..507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96853.21319.1 ID=prot_Ecto-sp13_S_contig96853.21319.1|Name=mRNA_Ecto-sp13_S_contig96853.21319.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=67bp
KVVEDGDHAEVVETLQSLKDSEPQLLVAVLDALGNLSLPPRLLGGITEDA
LGLLDSAQPSTLPVLVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029448FANCD2