prot_Ecto-sp13_S_contig9685.21318.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9685.21318.1
Unique Nameprot_Ecto-sp13_S_contig9685.21318.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length456
Homology
BLAST of mRNA_Ecto-sp13_S_contig9685.21318.1 vs. uniprot
Match: A0A6H5L3C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C0_9PHAE)

HSP 1 Score: 587 bits (1514), Expect = 3.600e-202
Identity = 356/456 (78.07%), Postives = 372/456 (81.58%), Query Frame = 0
Query:    1 MPSSHVPIKKYNYERSLYRWLMSRHPEPFEKHGITTKTLERAPLAREAFYRSGWLGAKVLVQNNEDNKFERTDFFDQIIERGLGHGDTRFSVEHVKSDEQSKLGITLDSATGKYYLQAYGSAKTRRPANRRNSAGSVSSSDADQDPAEPPHPTVKEIGDLIASEIEAVGEDAEVRLDKSRLERASPSGSTVLTFSISIRRRATIGXXXXXXXXXXXXXXX---CASSQRAGDAGATADAGAGDPTGRGMPPQAQAARPAQTVSTTPXXXXLAPGVRHMEHHQRPPAGTVSTSSSPCTPGMTGARQQEYS---RKRDATSVLEADAATLASVSQVGAKKHKEDVRSRSSLSPPGTSATGVASFGSGAGRDAMRMRTQAEENDAERRMIIAQAPFTPEFLEDLASLGGGVAKVEPAPRLPMSADSWRGDGPGLRTAGATFSGAMSATGSSSTSNGGHD 450
            MPSSH+PIKKYNYERSLYRWL+SRHPEPFE+HGITTKTLERAPLAREAFYRSGWLGAKVLVQN+EDNKFERT+FFDQIIERGLGHGDTRFSVEHVKSDEQSKLGITLDSATGKYYLQAYGSAKTRRPANRRNSAGSVSSSDADQDPAEPPHPTVK++GDLIASEIEA GEDAEVRLD+SRLE AS SGSTVLTFSISIRRRAT+GXXXXXXXXXXXXXXX   CAS QRAGDAGAT D          MPP AQAARPAQ +STT XXXX                                          RKR+A SVLEADAATLASVSQVG KKHKEDVRSRSSLS  G SATGVA+FGSGAGR+AMR+RTQAEE+DA RR IIA A FT EFLEDLASL  G    E APRLPMSA S RGDGPGLRTAGA+F GAMSATGSSS SNGGHD
Sbjct:    1 MPSSHLPIKKYNYERSLYRWLVSRHPEPFEEHGITTKTLERAPLAREAFYRSGWLGAKVLVQNHEDNKFERTNFFDQIIERGLGHGDTRFSVEHVKSDEQSKLGITLDSATGKYYLQAYGSAKTRRPANRRNSAGSVSSSDADQDPAEPPHPTVKKVGDLIASEIEAAGEDAEVRLDESRLEPASASGSTVLTFSISIRRRATVGXXXXXXXXXXXXXXXSGSCASGQRAGDAGATVDXXXXXXXXXXMPPPAQAARPAQMLSTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKRNAASVLEADAATLASVSQVGVKKHKEDVRSRSSLSLSGASATGVANFGSGAGRNAMRIRTQAEEDDAARRTIIAHAHFTSEFLEDLASLRDG----EAAPRLPMSAGSSRGDGPGLRTAGASFGGAMSATGSSSASNGGHD 452          
BLAST of mRNA_Ecto-sp13_S_contig9685.21318.1 vs. uniprot
Match: A0A835Z9J0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9J0_9STRA)

HSP 1 Score: 129 bits (325), Expect = 8.020e-30
Identity = 66/122 (54.10%), Postives = 83/122 (68.03%), Query Frame = 0
Query:    6 VPIKKYNYERSLYRWLMSRHPEPFEKHGITTKTLERAPLAREAFYRSGWLGAKVLVQNNEDNKFERTDFFDQIIERGLGHGDTRFSVEHVKSDEQSKLGITLDSATGKYYLQAYGSAKTRRP 127
             PIK+YNYERS YRWL+ RHP  FEK G+T+  LERAP+AR+A + + W G+K LV+  E  ++ERT FFD  I+RGLG G TRF++EH+   E+  LGI  D  TGK YL  YG A    P
Sbjct:    7 TPIKRYNYERSAYRWLLQRHPRQFEKEGLTSTALERAPVARKALFHTSWSGSKKLVRCVE-GRYERTVFFDTFIKRGLGFG-TRFAIEHLTPQERQILGICEDP-TGKVYLAHYGIAPQVEP 125          
BLAST of mRNA_Ecto-sp13_S_contig9685.21318.1 vs. uniprot
Match: A0A836C9L8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9L8_9STRA)

HSP 1 Score: 128 bits (321), Expect = 4.810e-28
Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 0
Query:    7 PIKKYNYERSLYRWLMSRHPEPFEKHGITTKTLERAPLAREAFYRSGWLGAKVLVQNNEDNKFERTDFFDQIIERGLGHGDTRFSVEHVKSDEQSKLGITLDSATGKYYLQAY 119
            PI+KYNYERS YRWLM+RH + F + GITTKTLE A  AR+AF++SGW GA++L++ +   + ERT  F+ II+RGL  G TRF ++ + + EQ+ LGIT DS   KY L  +
Sbjct:  337 PIQKYNYERSTYRWLMARHADIFARCGITTKTLESASRARQAFHQSGWEGARMLIRADSQGRHERTPLFETIIKRGLSKG-TRFDIDTISAREQATLGITFDSTLEKYVLSQF 448          
BLAST of mRNA_Ecto-sp13_S_contig9685.21318.1 vs. uniprot
Match: A0A836CGN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.310e-24
Identity = 59/114 (51.75%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    6 VPIKKYNYERSLYRWLMSRHPEPFEKHGITTKTLERAPLAREAFYRSGWLGAKVLVQNNEDNKFERTDFFDQIIERGLGHGDTRFSVEHVKSDEQSKLGITLDSATGKYYLQAY 119
             PIKKYNYERS YRWL++RHP+ FE  G+TT  LERAP AR+AF+  GW GA++L++  E  ++ERT FFD II RGL    TRF+  H+   E   L I    A  K+YL  +
Sbjct:    3 TPIKKYNYERSAYRWLLARHPKQFEARGVTTTVLERAPAARKAFWTCGWPGAQLLIRCVE-GRYERTVFFDTIIARGLQLS-TRFAYPHLTPAESDALQIRQSGA--KHYLSHF 112          
BLAST of mRNA_Ecto-sp13_S_contig9685.21318.1 vs. uniprot
Match: A0A835YVN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN4_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.430e-23
Identity = 57/111 (51.35%), Postives = 73/111 (65.77%), Query Frame = 0
Query:    7 PIKKYNYERSLYRWLMSRHPEPFEKHGITTKTLERAPLAREAFYRSGWLGAKVLVQNNEDNKFERTDFFDQIIERGLGH-GDTRFSVEHVKSDEQSKLGITLDSATGKYYL 116
            P +KYNYERS+YRWLM+R+ E FE  GITTKTLE A  AREAFY SGW GA+ L+Q +   + ERT FF+ II+RG+ H    RF    + + E + LGI  +  T  + L
Sbjct:    5 PTQKYNYERSMYRWLMARNSEAFETCGITTKTLESAKRAREAFYGSGWPGARYLIQVDSSGRHERTPFFEAIIQRGIRHQSGCRFDGAALTAGELTSLGIVRNPITKDFVL 115          
BLAST of mRNA_Ecto-sp13_S_contig9685.21318.1 vs. uniprot
Match: A0A6H5JN30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN30_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 3.610e-20
Identity = 55/123 (44.72%), Postives = 75/123 (60.98%), Query Frame = 0
Query:    6 VPIKKYNYERSLYRWLMSRHPEPFEKHGITTKTLERAPLAREAFYRSGWLGAKVLVQNNEDNKFERTDFFDQIIERGLGHGDTRFSVEHVKSDEQSKLGITLDSATG-KYYLQAYGSAKTRRP 127
             P+ K+N+ERS YRWL++RHP  FE+   T + L+ A  AR+AFY  GW  AKVL++ + D KFERT FFD II RGL +  TRF    +  DE   LG+  D   G K  ++ + S++   P
Sbjct:   10 TPVMKWNFERSCYRWLVTRHPAQFERLDFTAQILQSASRARKAFYECGWAEAKVLIRPS-DGKFERTPFFDAIIRRGLRNS-TRFDAATLTEDEIEALGMHRDETLGFKLQIRHFRSSRKELP 130          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9685.21318.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L3C0_9PHAE3.600e-20278.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z9J0_9STRA8.020e-3054.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C9L8_9STRA4.810e-2853.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGN8_9STRA2.310e-2451.75Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YVN4_9STRA3.430e-2351.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JN30_9PHAE3.610e-2044.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9685contigEcto-sp13_S_contig9685:292..4826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9685.21318.1mRNA_Ecto-sp13_S_contig9685.21318.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9685 292..4826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9685.21318.1 ID=prot_Ecto-sp13_S_contig9685.21318.1|Name=mRNA_Ecto-sp13_S_contig9685.21318.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=456bp
MPSSHVPIKKYNYERSLYRWLMSRHPEPFEKHGITTKTLERAPLAREAFY
RSGWLGAKVLVQNNEDNKFERTDFFDQIIERGLGHGDTRFSVEHVKSDEQ
SKLGITLDSATGKYYLQAYGSAKTRRPANRRNSAGSVSSSDADQDPAEPP
HPTVKEIGDLIASEIEAVGEDAEVRLDKSRLERASPSGSTVLTFSISIRR
RATIGGAAAAAAAGSDDNGGCASSQRAGDAGATADAGAGDPTGRGMPPQA
QAARPAQTVSTTPPPPPLAPGVRHMEHHQRPPAGTVSTSSSPCTPGMTGA
RQQEYSRKRDATSVLEADAATLASVSQVGAKKHKEDVRSRSSLSPPGTSA
TGVASFGSGAGRDAMRMRTQAEENDAERRMIIAQAPFTPEFLEDLASLGG
GVAKVEPAPRLPMSADSWRGDGPGLRTAGATFSGAMSATGSSSTSNGGHD
RDRAQR
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