prot_Ecto-sp13_S_contig9683.21316.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9683.21316.1
Unique Nameprot_Ecto-sp13_S_contig9683.21316.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length62
Homology
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Match: A0A6H5LM28_9PHAE (tRNA_edit domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM28_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.150e-33
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0
Query:    1 LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTEDLVKKLGATVAD 62
            LSGFPHNGVTVFGGLTP+PVILSEAVLALRPSFVW+GAG PLLKLGVSTEDLVKKLGATVAD
Sbjct:  149 LSGFPHNGVTVFGGLTPIPVILSEAVLALRPSFVWLGAGHPLLKLGVSTEDLVKKLGATVAD 210          
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Match: A0A225UIC1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225UIC1_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.020e-16
Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    1 LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTEDLVKKLGATVAD 62
            L+GF HNGV+ FG  TP+PVI++ A+  L+PSF+W+G G   +KL +S +DLVK LGA VAD
Sbjct:  146 LTGFGHNGVSTFGMKTPIPVIVAGAIAELKPSFLWLGGGAESVKLRISVQDLVKALGARVAD 207          
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Match: G5ACJ2_PHYSP (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=G5ACJ2_PHYSP)

HSP 1 Score: 76.3 bits (186), Expect = 1.640e-15
Identity = 34/62 (54.84%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    1 LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTEDLVKKLGATVAD 62
            L+GF HNGV+ FG  TP+PVI++  V AL+P+F+W+G G   +KL +S +DLVK LGA VA+
Sbjct:  146 LTGFGHNGVSTFGMKTPIPVIVAGDVAALKPAFLWLGGGAETVKLRISVQDLVKALGARVAE 207          
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Match: A0A836CLD2_9STRA (YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.940e-15
Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTEDLVKKLGATVAD 62
            L+GFPHNGV+ FG L  +P++LS A+  L   F+WMG G   LK+GVS +DLV+ L A VAD
Sbjct:  154 LTGFPHNGVSPFGSLCRVPMVLSSAIAELPEQFLWMGGGHTDLKIGVSVQDLVRALNAHVAD 215          
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Match: D0NP05_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NP05_PHYIT)

HSP 1 Score: 74.7 bits (182), Expect = 5.980e-15
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTEDLVKKLGATVAD 62
            L+GF HNGV+ FG  TP+PVI++ A+  LRP  +W+G G   +KL +S +DLVK LGA VAD
Sbjct:  146 LTGFGHNGVSAFGMKTPIPVIVAGAIAELRPPCLWLGGGAESVKLRISVQDLVKALGARVAD 207          
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Match: H3GY63_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GY63_PHYRM)

HSP 1 Score: 74.7 bits (182), Expect = 6.390e-15
Identity = 34/62 (54.84%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTEDLVKKLGATVAD 62
            L+GF HNGV+ FG  T +PV+++  V AL+PSF+W+G G   +KL +S +DLVK LGA VAD
Sbjct:  146 LTGFGHNGVSTFGMKTRIPVVVAGDVAALKPSFLWLGGGAESVKLRISVQDLVKALGARVAD 207          
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Match: A0A0W8D760_PHYNI (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D760_PHYNI)

HSP 1 Score: 73.9 bits (180), Expect = 7.010e-15
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTEDLVKKLGATVAD 62
            L+GF HNGV+ FG  T +PV+++ A+  L+PSF+W+G G   +KL +S +DLVK LGA VAD
Sbjct:  113 LTGFGHNGVSTFGMKTFIPVVVAGAITELKPSFLWLGGGAESVKLRISVQDLVKALGARVAD 174          
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Match: V9FBS8_PHYPR (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=V9FBS8_PHYPR)

HSP 1 Score: 74.7 bits (182), Expect = 8.970e-15
Identity = 33/62 (53.23%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTEDLVKKLGATVAD 62
            L+GF HNGV+ FG  T +PV+++ A+  L+PSF+W+G G   +KL +S +DLVK LGA VAD
Sbjct:  168 LTGFGHNGVSTFGMKTFIPVVVAGAITELKPSFIWLGGGAESVKLRISVQDLVKALGARVAD 229          
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Match: A0A3R7Z0T5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7Z0T5_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.480e-14
Identity = 32/62 (51.61%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    1 LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTEDLVKKLGATVAD 62
            L+GF HNGV+ FG  TP+PVI++  + AL+ SF+W+G G   +KL +S +D+V+ LGA VAD
Sbjct:  146 LTGFGHNGVSTFGMKTPIPVIIAGNIAALKSSFLWLGGGAEHVKLRISVQDMVRVLGARVAD 207          
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Match: A0A3F2RP97_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RP97_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.010e-13
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 0
Query:    1 LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTEDLVKKLGATVAD 62
            L+GF HNGV+ FG   P+PVI++  V  L+P+F+W+G G   +KL +S +DLVK LGA +A+
Sbjct:  150 LTGFGHNGVSTFGMKKPIPVIVAGDVAKLKPAFLWLGGGAETVKLRISVQDLVKALGAPIAE 211          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9683.21316.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5LM28_9PHAE1.150e-3395.16tRNA_edit domain-containing protein n=2 Tax=Ectoca... [more]
A0A225UIC1_9STRA2.020e-1656.45Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
G5ACJ2_PHYSP1.640e-1554.84Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
A0A836CLD2_9STRA4.940e-1554.84YbaK/aminoacyl-tRNA synthetase-associated domain-c... [more]
D0NP05_PHYIT5.980e-1554.84Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
H3GY63_PHYRM6.390e-1554.84Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A0W8D760_PHYNI7.010e-1553.23Serine/threonine-protein phosphatase 6 regulatory ... [more]
V9FBS8_PHYPR8.970e-1553.23Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
A0A3R7Z0T5_9STRA3.480e-1451.61Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A3F2RP97_9STRA1.010e-1350.00Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilyGENE3D3.90.960.10coord: 1..62
e-value: 1.1E-12
score: 49.7
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilySUPERFAMILY55826YbaK/ProRS associated domaincoord: 2..62
NoneNo IPR availablePANTHERPTHR30411UNCHARACTERIZEDcoord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9683contigEcto-sp13_S_contig9683:5962..6147 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9683.21316.1mRNA_Ecto-sp13_S_contig9683.21316.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9683 5962..6147 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9683.21316.1 ID=prot_Ecto-sp13_S_contig9683.21316.1|Name=mRNA_Ecto-sp13_S_contig9683.21316.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=62bp
LSGFPHNGVTVFGGLTPMPVILSEAVLALRPSFVWMGAGDPLLKLGVSTE
DLVKKLGATVAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036754YbaK/aa-tRNA-synt-asso_dom_sf