prot_Ecto-sp13_S_contig9677.21308.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9677.21308.1
Unique Nameprot_Ecto-sp13_S_contig9677.21308.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length191
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9677.21308.1 vs. uniprot
Match: A0A6H5JS47_9PHAE (Btz domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS47_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 4.200e-22
Identity = 130/148 (87.84%), Postives = 133/148 (89.86%), Query Frame = 0 
Query:    1 MHVAAEMAAAXXXXXXXXXXXXXDWYPDQQQQHSSPVPVPWSMAGEGAVPSAGPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLVQFGAAGGAGMPVQALDMSQQPLLNAQAMSFEPPATGA 148
            MHVAAEM AA  XXXXXXXXXXX  YPDQ  QHSSPVPVPWS+AGEGA PSAGP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLVQFGAAGGAGMP QALDMSQQPLLNAQ+ + E   TGA
Sbjct:  860 MHVAAEMVAASGXXXXXXXXXXXXXYPDQXXQHSSPVPVPWSVAGEGAAPSAGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLVQFGAAGGAGMPAQALDMSQQPLLNAQSATGE--GTGA 1005
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BLAST of mRNA_Ecto-sp13_S_contig9677.21308.1 vs. uniprot
Match: D8LS30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS30_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 7.950e-10
Identity = 57/70 (81.43%), Postives = 58/70 (82.86%), Query Frame = 0 
Query:  121 MPVQALDMSQQPLLNAQAMSFEPPATGADSGIPAGGXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGRQNF 190
            MP QALDMSQQPLLNAQA+SFEPPA GA SGIP   XXXXXXXXXXXXXXXXXXXX      AGAGRQNF
Sbjct:    1 MPAQALDMSQQPLLNAQAISFEPPAGGAASGIPXXXXXXXXXXXXXXXXXXXXXXXNATGRGAGAGRQNF 70
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9677.21308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JS47_9PHAE4.200e-2287.84Btz domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LS30_ECTSI7.950e-1081.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9677contigEcto-sp13_S_contig9677:3209..5049 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9677.21308.1mRNA_Ecto-sp13_S_contig9677.21308.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9677 2860..5112 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9677.21308.1 ID=prot_Ecto-sp13_S_contig9677.21308.1|Name=mRNA_Ecto-sp13_S_contig9677.21308.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=191bp
MHVAAEMAAASGAGGAGGGAGGGDWYPDQQQQHSSPVPVPWSMAGEGAVP
SAGPPAGGGAVLTDDVVLPPPQADSWMRTAVQQELLREQLQQEQAVAQQF
LQQQQQQQHLVQFGAAGGAGMPVQALDMSQQPLLNAQAMSFEPPATGADS
GIPAGGGVYYPPPPPQQQQQQQQQQQSATGGGAGAGRQNF*
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